ChIP-Atlas: Target genes

Potential target genes for BRCA1

Query protein: BRCA1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX150596 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
BRCA1's Target genes

◢ BRCA1: Average

◢ SRX2188678: EWS502

◢ SRX2188679: EWS502

◢ SRX150457: GM12878

◢ SRX150631: HeLa

◢ SRX150688: Hep G2

◣ SRX150596: hESC H1

◢ SRX2188684: IMR-90

◢ SRX2188685: IMR-90

◢ SRX359987: LoVo

◢ SRX182682: MCF 10A

◢ SRX481566: MCF 10A

◢ SRX3798673: SH-EP

◢ SRX3798674: SH-EP

◢ SRX3798679: SH-EP

◢ SRX3798680: SH-EP

◢ SRX5025671: SH-EP

◢ SRX5025672: SH-EP

◢ SRX5025673: SH-EP

◢ SRX5025674: SH-EP

◢ SRX5025675: SH-EP

◢ SRX5025676: SH-EP

◢ SRX2188672: TC-32

◢ SRX2188673: TC-32

◢ SRX2188690: U2OS

◢ SRX2188691: U2OS

◢ BRCA1: STRING

MAP2K2
BTBD10
STXBP4
COX11
STRIP1
COPB2
RPL12
LRSAM1
QRICH1
TMEM209
NAA35
ERCC6L2
SUPT5H
RFC5
TAS1R1
NOL9
XPC
LSM3
ASXL1
ERGIC2
MARCHF7
PTPN4
CHAF1A
RGPD2
RGPD1
BANP
TUBGCP5
SLC25A11
RNF167
MAPK14
FAM200B
ARF3
MAP10
ZZZ3
DENR
CDC5L
CDK12
FAM135A
SKA3
MRPL57
MTRNR2L9
TIPIN
CAND1
PPP4R3B
RPL17-C18orf32
RPL17
ANKFY1
GPATCH3
COASY
CFAP70
SUGP1
MAU2
HNRNPH3
PBLD
VDAC3
TMEM18
PRDX1
COQ9
CIAPIN1
AKAP11
SCAMP5
PSMD5
ECHS1
NOL11
STYXL1
MDH2
ETFA
RPL7A
MED22
RPL10A
SMG5
CCNC
RPS19
C6orf89
SMIM10L1
PRH1-TAS2R14
PRH1
MTMR8
RBM39
NOP14
GRK4
NCOA4
NAA38
CYB5D1
IREB2
GMPPA
MTRNR2L10
PDRG1
UHRF2
PUF60
MDH1B
FASTKD2
RPS11
TTC23
LRRC28
FSIP1
KIN
ATP5F1C
ATF2
SRP19
SLC15A4
SRCAP
LOC730183
SPRTN
EXOC8
TMCO1
MTRNR2L2
DBR1
CCT8
WDR73
LAMP1
EIF5
HSPA4
POLDIP3
TAOK1
MMS22L
MYEF2
CTXN2
CEP350
RPS6
RBM15
ADAT1
DCTN2
DARS1
ZFP91
LPXN
MED1
PURA
RCC1
NRBF2
CD2AP
LUC7L2
SLC39A7
RXRB
HSBP1
FAM76A
DNAJC27
JOSD2
SEC22C
NKTR
AKAP1
TRAPPC2
OFD1
RPS28
NDUFA7
MAD1L1
MTRNR2L8
RC3H2
DHX37
ZFC3H1
THAP2
COX7B
RPL27A
POP7
HERC1
WDR77
ATP5PB
USP54
YOD1
PFKFB2
MAP3K7
ANKRD13C
SMC1B
RIBC2
ZCCHC14
SPAG16
NSUN7
MPC2
DCAF6
HSPA12A
ENO4
MAK16
MATR3
TAB3
ZNF582
SHPRH
NSUN3
DHFR2
SPDL1
EFHC1
CUL3
EIF4A3
THAP1
WDR74
SNX5
MGME1
DGUOK
ZNF346
CDC20
AGBL3
SEPTIN7
SLC25A4
SMARCA5
ATF7-NPFF
ATF7
DZIP3
CIP2A
NANP
ASPH
CYB561D1
CHUK
POLR2E
SLC12A2
HBQ1
IKZF5
ACADSB
GRWD1
ZBTB2
SF1
TGOLN2
EHD1
ZNF286A
INTS13
FGFR1OP2
MICOS10-NBL1
MICOS10
GLCE
NFYC
ZNF414
RPL23
MRPS7
GGA3
UBE2D3
TADA3
ARPC4-TTLL3
ARPC4
TTLL9
ZNF136
NKRF
SEC62
CCDC77
PIGN
CCNJ
KSR2
MBTPS1
HASPIN
ERICH6
SLU7
CCT5
ATPSCKMT
SAXO1
RRAGA
RPS15
ASH2L
NDUFA11
VMAC
GOLM2
CLPTM1
WDR6
C1orf74
PAXBP1
ZNF317
RPS15A
ZNF420
RNPC3
KIAA1191
METTL16
GAS8
SRSF10
SMNDC1
DNTTIP2
CLP1
FOXO3B
HSPH1
ABI1
THEGL
WDR27
C6orf120
ZNF850
CBWD5
CBWD3
LTV1
IMP3
CBWD6
SMC4
IFT80
TTC32
MTRNR2L6
MTFR1L
RAB33B
YIPF3
POLR1C
ZNF566
CSDE1
SLC25A26
GDI2
DNAJB4
FUBP1
SLC35E2B
ATF4
PROM1
MRPS18C
HELQ
BZW1
RPS9
RPL26
TAF13
VMP1
PTRH2
YY1
KBTBD6
MICU2
ADNP
AURKAIP1
CCNT1
RIC8B
RPS7
GPBP1
ANKRD54
RBM42
RBPJ
USP47
PHF12
SMIM27
DDHD2
SVIP
BCLAF1
PPP1CC
CNP
INKA2
DDX20
IFRD1
NUDT2
KIF24
PPP1R42
EDRF1
THADA
ETF1
DNAJA3
MOB1A
NFATC3
AHCTF1
LYRM7
DSE
TSPYL1
RBM26
ZNF219
SIRT5
LIN7C
CENPC
SSNA1
ANAPC2
RMI1
HNRNPK
ZKSCAN2
NOP16
HIGD2A
COPS3
MFSD8
ABHD18
SMARCD2
SLC35E2A
RICTOR
NOC4L
DDX51
SCAMP3
MRE11
ANKRD49
ZKSCAN7
CUL5
INTS9
HMBOX1
NMRAL1
HMOX2
HIBCH
GCA
NPTN
SSR4
IDH3G
USP53
ZNF790
ZNF345
UBR3
GORASP2
TYW1
MAGOHB
MRPS14
CHURC1-FNTB
CHURC1
CREBZF
SRRT
POLR2B
NOA1
TMEM245
CNPY2
DRG1
FKBPL
AGL
TMEM183A
RPS2
TASOR2
SIPA1L1
PNN
PMF1-BGLAP
PMF1
FAM50B
PPM1G
PXMP2
POLE
ICMT
GSTO2
SPINT2
SEC63
CWC25
PSMB2
FZD6
PACS2
BRF1
CENPV
LSM14A
INPP5F
SLC13A3
GALNT13
SNRPC
EIF1AD
BANF1
TMEM127
CIAO1
AGA
LIN37
PTPN1
H2AC19
H2AC18
CENPB
CDC25B
C20orf27
RPS3A
ATP5MC1
RFC3
BCAS3
TARDBP
KPNA2
STK38L
PRPF4
CDC26
KDF1
NPM1
TMEM107
NEFH
PPP1R10
MRPS18B
PCMTD1
ALKBH2
VIPAS39
AHSA1
PDE12
SCAMP4
ADAT3
C5orf24
AASDH
USP39
PLOD2
PPP1R12A
CHST7
NUP133
PIH1D1
RHOC
PIK3R2
NUP153
COQ3
NOC3L
SMC1A
RIBC1
MAFF
AP2B1
DFFA
ZNF614
NANS
MTRF1L
ABCC10
SLC35B4
ZYG11A
AP4E1
TBL3
TAF1D
C11orf54
ZMYM3
TRIM37
NSRP1
PRKDC
MCM4
ERLIN2
RAPGEF6
PHB
NPRL3
INO80
MTHFD1
RAMAC
PHF5A
ACO2
PARPBP
NUP37
DLX1
EMD
ZNF829
ZNF568
UBE2D2
ANAPC4
ATAD3A
MRM3
GLOD4
METTL25
CCDC59
ASF1B
FANCD2
SMARCC1
SUV39H1
TSPYL4
PARP2
POU4F1
PTGR2
SMDT1
SOWAHC
SEPTIN10
GID8
DIDO1
ITGB1BP1
CPSF3
MRTFB
ZNF426
HDAC10
METTL2B
GOLT1A
IFT74
CCDC86
SLC39A9
ERH
PSMD2
DMXL1
PA2G4
SNRNP70
FANCC
NCL
RPL23A
THAP7
TCERG1
C14orf39
FAM122A
PPIL3
NIF3L1
ZNF593
C1orf232
ZNF236
CACYBP
SEC61A1
ACCS
C19orf53
GINS4
PPP1R15A
RPL39L
SAMD8
NUP214
UMAD1
GPR19
UPF3B
LSM8
TAB2
SLC25A28
AFF4
PDS5A
NMD3
TTC14
CETN3
SMARCAD1
TROAP
WNK3
ASNSD1
ASDURF
MAD2L1
CD55
ZBTB42
SPATA33
PTGES3
HAUS5
TEX9
SMARCAL1
TCF3
C20orf96
ZNF302
TMEM11
POMZP3
SAP18
CCNH
MYSM1
RPP38
EXOSC10
PPOX
MOB1B
SUGT1
ZNF559-ZNF177
ZNF559
FDPS
CFAP74
SBNO1
SUPT16H
ADSS2
APTX
DDX19A
SETD5
AMDHD2
ZNF548
NOP9
DHRS1
DPP9
GPAM
GTF2H3
EIF2B1
DDX42
CCDC47
TFIP11
RSL24D1
SREK1
WDR44
CAMK2D
DDX3Y
RPL24
EP400
RAD23A
HSP90AB1
ZNF512B
RBBP7
SNRPG
SLX4IP
RAB1B
CLPX
SMC5
KBTBD7
ZFP30
WRNIP1
RPS6KB2
RPS8
SPTLC1
NRL
DCAF11
PHF7
BAP1
SMG7
IPO11
OXNAD1
DPH3
GGNBP2
ETV5
ULBP3
SSU72
ZZEF1
CYB5D2
SEC23B
HDAC6
PAK1
GPN3
FAM216A
CELF1
PTPMT1
ZBBX
ACOX3
TRMT44
ZNF527
HMGB3
ARHGAP35
GGA1
ADNP2
FBN1
CCNG1
ZNF300
SAXO2
EFL1
KIT
ATXN1L
PIGW
MYO19
ZBTB25
ZBTB1
FUS
SETDB2-PHF11
SETDB2
CAB39L
ZNF547
TRAPPC2B
ZNF721
PIGG
FADD
MRPL12
NDUFS7
ZWILCH
RPL4
WASHC4
DIS3
NSDHL
CETN2
ACVR2A
DNMT1
TBCCD1
TRA2A
DNAJB11
CCDC28A
EIF4A2
CARMIL1
FNTA
WASHC2A
BCAS1
OGA
LANCL2
CAMK2G
UQCRC2
GCLC
TRIAP1
UPF3A
EED
STAG1
PRDM4
RPL9
LIAS
ZDHHC5
ANKRD18A
OPA1
UFSP2
ADPGK
SF3A3
ZNF335
UFC1
CHST12
EDEM3
TUT1
MVK
TAF15
WASF2
SEZ6L2
COX16
PMVK
NBPF11
AP2S1
CBWD1
PDPR
HELLS
LARP1B
UIMC1
IPO4
E4F1
TECPR1
GNG3
BSCL2
HEXA
GNB2
CHIC2
PRTG
RANBP2
SSBP1
RFC1
SF3A1
CCDC157
PIP4K2B
MAPKAPK5
FAM149B1
ECD
RALBP1
PLK4
PRDX2
CDIPT
PSMD10
ATG4A
VPS29
RAD9B
MTHFSD
WWOX
LYRM2
MICU3
CD320
NKAP
TBC1D17
AKT1S1
OSBPL11
BUB1B
YBEY
MCM3AP
LIN54
TIMM22
EIF2AK2
CHFR
PLTP
TBC1D19
WDR19
ATP8A1
ANXA7
NAA60
CARM1
BRAF
QTRT2
CCDC191
PRDX4
IFT46
NR6A1
SYN1
NAP1L3
FAM133A
MTAP
POLG
ABHD11
NAT10
FAM71E1
EMC10
GRB2
SRSF5
ZRANB3
R3HDM1
GPR108
TARS3
TFRC
CISD1
RFX1
C8orf37
PPIL4
SLC9B2
PDE4A
POLR1B
MRPL21
IGHMBP2
UGGT2
KAT5
NECAP1
PKNOX1
TUBGCP6
FAM227B
DTWD1
OGDH
TAF7
ANKRD13A
C6orf226
ANAPC5
PUM3
MIA3
SAR1A
MX1
MRPL55
SLC39A3
UCHL1
ATP9B
ALDH4A1
ILF2
RPGRIP1L
FTO
VRK1
CNNM2
FCSK
TSR1
KIF15
KIAA1143
SGSM2
DHDDS
NUF2
EID2
DDX3X
SELENOH
BDP1
HSPA6
TEX19
ZC3H3
C1D
PKIG
RECK
NME1
TBC1D5
TFPT
PRPF31
ERMARD
RPL27
ZW10
ZKSCAN5
SRRD
HPS4
TMF1
PSTK
KMT2D
PEF1
DNAAF3
LRPPRC
MED23
MAP3K13
GATM
MFN2
ADPRH
RNF166
CTU2
NOP58
WRAP53
TP53
TPD52L2
ZNF181
DMAP1
CCDC124
ZNF846
PRPF40B
PLEKHG2
ZBTB20
MRPS25
SNAP29
PI4KA
PRKCI
TAF11
MTMR14
ELAVL2
HTT
CKLF-CMTM1
CKLF
FAM228B
SF3B6
GPR146
ZFPL1
CDCA5
PDXDC1
RBBP5
SNRPA
C19orf54
OR1F1
TMEM256
TRIM26
PLD2
RNPS1
RAB11B
NDC80
METTL4
FUNDC2
PPM1K
NRXN2
FNDC1
RAB35
POLR1F
YJU2
SERP1
EIF2A
NDUFB6
RACGAP1
ZNF268
RNF139
DNAJC2
AKT3
PWP1
RPL22
GPR137
STK19
DXO
ZBTB8OS
RBBP4
ETFDH
C4orf46
MCCC2
PRRT1
PPT2
CCNL1
KNL1
MEPCE
YTHDF2
PFDN4
HESX1
APPL1
HMGCS1
MRRF
CCAR2
VPS37B
CLTC
SSH2
CHMP4A
TOR1AIP1
CLPB
TMEM237
POLR3E
SUCLG1
PTCD2
MRPS27
SCG3
RLF
OSGEP
APEX1
INAFM1
DUS2
DDX28
NDUFA10
NR1H2
TRIM41
ECSIT
IQCH
AAGAB
ATP6V1H
DLST
WDR59
ZNF79
TMEM198
CHPF
CDON
SMC3
PRTN3
MRPL2
KLC4
SPC25
SLC41A3
RAB28
CNTROB
DSTYK
PRC1
FBXW7
CHD5