ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741422 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◣ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

WDR74
MTRNR2L2
SPAG8
CDK12
STOML2
PIGO
MTRNR2L8
CCDC107
TBC1D4
MED23
UBE2F
PSMB6
PEX3
ADAT2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PTPRF
VPS37D
ARHGEF1
ZBTB40
CLTA
RPS7
RGPD2
RGPD1
RNF216
HRCT1
TRIP4
INTS12
GSTCD
ATP5MC3
UTP25
RPL27
TESK1
DMAP1
KDM1A
COMMD2
H4C3
MRFAP1L1
AKIRIN2
POLR1H
AURKAIP1
ZDHHC5
GTF3C3
TOMM7
UBE2L3
RMND1
ARMT1
RUSC2
AHCY
NFE2L2
TLN1
CREB3
LRRC37A3
AP2A2
SIRT5
ARL14EP
NLRX1
SSBP1
TOP3B
CLPB
ZCCHC4
DNAJC19
GNE
PDCL
PHKB
ITFG1
MRPL45
PSMF1
TSSC4
GTF2H4
CYRIB
DNAJC25-GNG10
DNAJC25
OSGIN1
RPP25L
ARHGEF39
ZFAND1
IL11RA
SNRPB2
TRAPPC9
OSCAR
NDUFA3
COX7A2
CCDC200
RBM39
RBBP5
ATR
ZSCAN9
ZNF335
MRFAP1
EIF3E
MRPS14
EPRS1
KIF3B
NR6A1
UBFD1
EARS2
RNF24
ELP3
TBC1D19
WDR43
DYM
CABLES2
FAF1
NCOA5
C9orf131
GBA
NDUFS7
SMG5
GTF2H2
NPR2
ERCC6L2
UBE2V2
ENGASE
TENT2
PPP5D1
CALM3
DPY19L4
CTNNBL1
SLC35B1
RGP1
GBA2
MTERF1
SPHK2
RPL18
TACO1
PANK3
PRDX1
MAD1L1
SLC9A1
DSTYK
PRMT1
STX16
FANCG
AARS2
RPS14
REXO4
MRPL58
FBXW5
C8G
HIBCH
PLEKHM3
INKA2
DDX20
ZMAT2
VCP
SF3A3
AMZ2
EIF4A2
CASC3
EIF1AD
BANF1
CRLS1
MELK
DPH5
GPCPD1
AP1G1
ZER1
PRPSAP1
FAM8A1
NFX1
LOC730098
TMEM242
UNC13B
PAXBP1
DRG2
RPL38
RAC1
TPM2
MTF2
RIN2
DDX18
COMMD6
HINT2
ZMPSTE24
SNAP47
JMJD4
RAD52
CCNC
ADNP
FBXW2
MRPL35
CDK5RAP1
RRP15
TFB1M
DNM2
MRPL39
EIF3F
NDUFC2-KCTD14
NDUFC2
RECK
EDC4
AP4E1
NOTCH2
EI24
CDC25B
PDE4DIP
ZNF638
NDUFAF4
KLHL32
MVB12A
UIMC1
EIF3D
MRPL12
MRPL30
MITD1
ZKSCAN2
POLG2
YTHDF2
ASXL1
ZNF165
TMEM222
SMU1
SMARCD2
ZBTB3
EED
MRPL44
MRPL38
STAT3
RPL37
ZSCAN16
PLEKHG2
HIF1AN
NOL11
MRPL3
ATF2
CCDC88A
PIH1D1
FKTN
SP2
ZDHHC24
ACTN3
FOXK2
ATP5PD
PDCL3
PAFAH2
WDR31
ZNHIT6
GORASP2
WDR70
PDCD6
ALG10B
PCCA
ZNF8
FXN
UBE4A
NUTM1
NOP10
RNFT1
NUDT9
CIC
POLR2M
P3H4
FKBP10
SH2B1
SNRPE
UCHL3
DOT1L
SMCO4
LUC7L2
PRELID2
MDM4
TANK
TXNDC11
ZNF461
MSL2
ACBD4
C8orf37
LMAN2
CARD14
COPS7A
FAM133B
DCP1A
RPL10A
LRRC59
FAM227B
DTWD1
SNX16
KXD1
HLA-E
C19orf25
ALDH16A1
ADRM1
MTRNR2L9
NUCKS1
NEURL4
ZDHHC12
RFX1
TOR1A
GOLM2
NPAS4
MLLT1
SRRD
HPS4
SLC29A3
SPATA2
ATG16L1
SETD1A
SGSM1
SOGA1
TAF1C
DLAT
CLPP
TIA1
UBOX5
FASTKD5
TRMT1
TKT
EPS15
XKR8
COASY
PDE4A
ARNT
LSM14B
ZCCHC14
TCF3
UNC93B1
TJP3
CACTIN
METTL14
MCC
CEP164
FKBPL
MATR3
PREB
FMC1-LUC7L2
PDSS2
SLC25A16
ZNF184
MEGF9
KDM3B
NUP85
SMG8
GRSF1
EIF3C
SPATC1L
RPL6
SLC25A25
NAIF1
GADD45B
WDR59
PAK4
LTO1
CCNT1
SLC30A6
CHST12
DAGLB
ICMT
SARS2
MRPS12
HAX1
SLC35A4
APBB3
TERF2
HPS6
CNOT11
ATG4C
SCAMP4
MTRNR2L10
ADAT3
SNU13
ZNF77
TCTN3
LARP1
SLC38A10
CLUAP1
ZNF131
GSTA4
RBM4B
NAE1
SLC44A1
LGR6
CDK8
CWF19L2
NUF2
PPP1R13L
MEX3C
PTPN1
PTK2B
EFR3A
SRXN1
RAB14
GSN
KANSL3
EIF3CL
RAB11B
LDLRAP1
SLC31A1
FKBP15
PKD2L2
TDRD7
PSMD4
RPL36
AARSD1
TBX6
MRPL54
APBA3
PDLIM7
MTOR
ADPRHL1
PPP6C
MAPK14
VPS13B
ILF2
PCCB
CLK3
MEGF8
WASF2
SRPK1
GABARAPL1
HUS1
TPK1
SPC24
GTF2H5
ZSCAN25
RIF1
PCBD2
MTBP
MRPL13
RAB4B
UBXN4
ZFAT
RNF213
MKNK2
SWSAP1
GLIPR1L2
CCDC22
COPS4
DPP3
TMEM41A
SPAG4
HPS1
TGFB1I1
NELFCD
PSMD9
HPD
AP2S1
PSMB3
GRK1
CIAO3
ZZEF1
GHITM
CYB5D2
LAPTM5
KLHDC9
CBX4
SYMPK
FOXA3
PITPNA
KIF16B
DYNC2I1
ZC3H15
ZNF555
TIGD1
EIF4E2
ZNF234
TIMM10
TARS2
RNF187
ZNF606
GGCX
SLC27A4
TRIM26
RAB5B
SORBS1
SYT11
GON4L
VPS37C
USP35
NCBP3
KCTD21
NACC1
MANBAL
RAB2A
EMC4
MRI1
DOLPP1
ZNF551
ATF6
AP3B1
NICN1
PGK1
TSEN54
CASKIN2
TIMM23B
PARG
DMAC2
RFX7
UTP3
ISOC2
RCC1
SCFD1
BRAP
ACAD10
GADD45GIP1
TBPL1
EMC8
COX4I1
ZBTB45
LMO7
DCT
GK5
ANXA2
PPP6R1
SIRT4
SEMA4B
ADAM19
DHX15
C17orf64
NDUFS5
DENR
RCN1
KTN1
UBE2Q1
SEC13
GRPEL2
SYT7
RPS6
ATP5MC1
RABGEF1
RAB5C
RPL37A
GABPB2
COX16
SBDS
ELOVL6
TRAPPC3
TIMM9
ST6GALNAC4
KIAA0586
INO80C
SLC35E2B
TMEM214
KDSR
RNF114
PPEF1
MTMR14
ABRAXAS2
LEO1
PKD1L2
SNRPC
CYB5R4
TTC38
CHMP6
GPSM2
BEGAIN
ENSA
COX5A
GALNT10
HMGN4
ASF1B
TRMT2A
TGDS
RANBP1
KIF2C
FLOT1
DHX16
MDGA1
HIBADH
RIOX1
PRRG2
NOSIP
SDAD1
TFPT
PRPF31
IL1RAP
FAM168B
SLC25A20
VKORC1
CTR9
STXBP3
FAM200B
SMARCC2
MFSD4B
AKT2
TMEM161A
TSACC
CCT3
NEMF
ZNF687
TSC1
GFI1B
CFDP1
LPAR2
RBM12
FBXL19
CPNE1
EIF2D
PMM1
ECSIT
RPN1
LPP
SYNGR2
RBM45
TOM1L2
DRC3
H6PD
GEMIN6
DPY19L1
SHFL
SSBP2
DEF8
NIPA2
LZTS3
BRIX1
ZBTB43
SPOCD1
POLR3E
H4C6
GAMT
SCML1
NME1
CIZ1
RBM12B
NDUFAB1
MARCHF7
CYLD
PTPRA
HEXB
TRIM32
ASTN2
LAMP3
WIPI2
OPA3
ERCC1
PTPN4
CDA
SLC12A9
NLRP1
KLHL20
EPHB4
SLC25A44
DRAM2
CEPT1
CCDC117
YEATS2
UQCR11
MTR
C16orf70
PRUNE1
MINDY1
TIMM23
TCIRG1
RPS29
PRKAB2
PPIL3
NIF3L1
CHD1L
USP45
ZNF572
XKR7
MCM7
AP4M1
AGBL3
CLCF1
OPA1
NMRK1
EEF1AKMT1
CERCAM
BNIP1
MRPS15
ZSWIM3
SP1
ACOT8
S1PR4
MARS1
ARHGAP9
ARHGAP24
TTC21B
TMEM18
RPL24
EIF5A
SYNJ2
POU2F2
MAD2L1BP
NEDD1
INTS5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIM59
TDP2
NEK6
ACOT13
ZNF554
VTA1
NMBR
GPR160
CDC5L
NKIRAS2
DNAJC7
EHD2
REXO5
ERI2
RCAN1
WDR7
MED18
TRIM45
ANKRD46
LMTK3
ZNF582
OSBP
ZNF408
ARHGAP1
FPR1
SH2D5
MAP3K10
TATDN1
OMA1
NDUFB9
DAB1
CDK9
ACOT9
ITGB3BP
EFCAB7
ATAD2
ASB6
MAP2K6
EVI5L
NCOA7
GNG7
ADA
MDFIC
PGBD2
HM13
C6orf226
KCTD18
NUDT8
MTIF2
KLF5
ROBO3
NBN
CTPS1
ZFP36L1
NIPA1
DST
C8orf76
BEND6
ALKBH3
ICAM1
IQSEC3
IFT46
IFTAP
ZFAND4
ZCCHC3
VAT1
GALNT11
USP42
MRPS33
RABGGTA
MTHFSD
E2F6
ATXN7L2
CTC1
C4orf48
BANP
PNPLA6
ARFGEF2
ANKRD13C
COL6A1
AMOTL1
MOSPD3
GTF3C5
RPS20
COL18A1
INTS2
GALT
TFAM
STX18
PLEKHG4
POLG
FUT10
SNUPN
GRK6
PRCD
FLVCR1
PARP2
MRPL48
ARSD
ABCB8
ADAR
SMIM8
SH3GLB2
EPOP
TBL3
SLC66A3
COQ3
RPAP1
SAAL1
MYO1C
MAP11
TAF5
SEC62
FAM220A
TPP2
PRRT3
FRA10AC1
ST6GALNAC6
RBIS
LSG1
TUFM
STARD3NL
RIPOR3
UBE3B
TCERG1
TADA1
KCTD10
TRIB1
TIMM22
BMS1
PYCR1
SNRPB
MELTF
SUGCT
MPLKIP
KDELR2
CHST15
CDK11B
CDK11A
MAPK1IP1L
FAAP20
SELENOH
WDR36
TOR1B
HTR5A
HEATR1
EIF5A2
RPL26
C1orf127
GSDMD
ZNF443
ETFDH
C4orf46
CCDC42
ZNF609
FAIM
ESCO1
DIPK1B
SPAG16
MBD4
IFT122
MMS22L
STXBP4
RPS12
MRPS10
KCNIP3
COX11
OLFM2
POLI
TTC14
POFUT1
PLAGL2
NES
CCDC43
UPP1
POLR2J
RPL13
PRKAR1B
NSUN4
ZC3H6
TTC26
SCAND1
RGL2
LITAF
GRHL3
POLR1F
KDM3A
INTS9
HMBOX1
FUCA2
CELSR3
RARS1
ARHGEF16
DECR1
TRIM41
UQCC1
PPP6R3
MRPS17
C20orf27
POLR2J3
HERC5
ELAVL1
CGGBP1
C3orf38
PIGBOS1
PIGB
FAM135A
CYREN
SEC14L1
HSPA6
YIF1B
PIP5KL1
TIMM17A
PKN3
FBXW9
FCHO1
DDX1
FAM98B
ALG10
TMEM170A
BCAS3
COQ7
SNX8
TBRG4
PTK6
GTF2H2C_2
GTF2H2C
TBL1X
SERPINB6
PPP4R3B
KCTD3
DTD1
VARS1
CPPED1
MRPS28
MAIP1
ZNF764
PIH1D2
NKAPD1
EFHD1
B4GAT1
ARPC3
ABT1
RBL1
NDUFS3
KBTBD4
CASP4
ARL4A
TRABD
TIPARP
RBM28
ZNF577
ZNF181
LY96
HIPK3
DNMT1
CIPC
METTL25
IPO13
DUS1L
CHCHD2
CCDC59
ID1
BCAR3
TUBGCP3
PRDM8
LIMS1
KLHL12
CDK20
DAB2
GALK1
CDC42
SDHAF3
SIGMAR1
KPTN
KIAA0895
ZNF655
TRAF6
THEM4
RAG1
MUC1
CCZ1B
UBE2S
SEPTIN7
CYP51A1
TNPO3
ZRANB2
ZDHHC6
WDR38
VTI1A
PFDN4
CORO1C
ZNF713
PEAK3
DIS3
TRAM1
TMTC3
TCP11L1
FBXO46
CEP290
ZNF391
GLIS2
ZSWIM4
ZNF3
SURF6
METTL18
C1orf112
FGFRL1
AP3M2
TAS1R1
RGPD8
RGPD6
RGPD5
NOL9