ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741418 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◣ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

PTPRF
CCDC107
GTF2H4
TBC1D4
WDR74
HLA-E
ZMAT2
MRPL45
PSMB6
UBE2V2
ZNF335
PIH1D1
ALDH16A1
NEURL4
MTRNR2L8
VPS37D
RNF24
CYRIB
OSCAR
NDUFA3
RNF216
PRMT1
AHCY
MELK
NLRX1
EI24
CDK12
TOR1A
NR6A1
MTRNR2L2
SMU1
C19orf25
STOML2
TESK1
MRFAP1L1
RBM39
UBE2L3
KXD1
PIGO
RIN2
ARHGEF1
RPS14
ENGASE
DLAT
RAC1
DPH5
NUDT9
ZNF638
ZNHIT6
FBXW5
C8G
UTP25
UBFD1
EARS2
SMCO4
TOMM7
ZFAND1
XKR8
DRG2
EPRS1
ADRM1
WDR43
SLC29A3
EPS15
CLPB
DNAJC19
ZCCHC4
CCDC200
SMARCD2
UNC93B1
DNM2
KDM3B
AKIRIN2
SP2
CTNNBL1
AARS2
CDC25B
HAX1
SPATA2
UIMC1
PTK2B
EED
MATR3
TKT
MED23
DYM
PTPN1
ZDHHC24
ACTN3
CLTA
SETD1A
RUSC2
MCC
MLLT1
PDSS2
TENT2
PRPSAP1
SLC25A16
ZCCHC14
MEGF9
PSMD4
ARHGEF39
SLC31A1
FKBP15
SOGA1
FXN
SPAG8
TJP3
PKD2L2
HRCT1
ZDHHC12
SPAG4
AARSD1
COASY
EFR3A
WDR59
RIF1
SRRD
HPS4
TPM2
PHKB
ITFG1
FKTN
LOC730098
ATG4C
TIMM10
UBOX5
FASTKD5
FKBPL
TMEM161A
NUP85
CNOT11
OSGIN1
ZNF131
NDUFS5
RGPD2
RGPD1
ZBTB3
CDK8
GHITM
TCIRG1
KDM1A
DRAM2
CEPT1
TFB1M
ATF6
TAF1C
TLN1
CREB3
SPHK2
RPL18
TDRD7
LTO1
ELP3
NELFCD
CRLS1
RCN1
SIRT5
SLC25A25
NAIF1
PAXBP1
LSM14B
RPL6
SLC35A4
APBB3
PDCL
MRFAP1
PLEKHG2
PKD1L2
TERF2
LMO7
CBX4
GPCPD1
ST6GALNAC4
RPL13
CCNT1
GGCX
SYNJ2
ERCC6L2
UBE4A
SH2B1
SRPK1
PITPNA
RIOX1
ARNT
GSTA4
CABLES2
GLIPR1L2
CLUAP1
SLC25A44
STAT3
CCNC
TRIP4
GRSF1
DAGLB
GABARAPL1
TIA1
PREB
NCOA5
EIF3C
CWF19L2
ADPRHL1
SYMPK
FOXA3
SEMA4B
CLK3
PCBD2
KCTD18
PPP6C
NOL11
IL11RA
VPS13B
EIF5A
SYT7
SNU13
NUF2
GK5
HPS1
CIAO3
C9orf131
TPK1
ADA
LARP1
DENR
GPSM2
FOXK2
ATP5PD
MAPK14
STXBP3
RPP25L
ZC3H15
PDCL3
LAPTM5
RAB5C
LDLRAP1
MRPL44
MRPL38
PANK3
RBM4B
FAF1
PDE4A
CDYL
TRMT1
HIBCH
NACC1
TRMT2A
RANBP1
RPL36
COMMD2
SSBP1
C17orf64
GTF2H5
COX7A2
PNPLA6
PPP1R13L
AP2S1
AP3B1
GABPB2
CACTIN
FAM200B
UQCR11
LY96
FBXO27
KIAA0895
ANLN
SARS2
MRPS12
SLC38A10
MRPL54
APBA3
ZNF551
CIC
PAK4
ARSD
SLC35B1
BRAP
ACAD10
TOM1L2
DRC3
MRPL39
METTL14
GNE
POFUT1
PLAGL2
CACUL1
POLG2
MAP3K10
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
LEO1
MED18
PIP5KL1
DSTYK
C16orf70
SGSM1
SLC30A6
NCBP3
RAD52
ECSIT
ICAM1
TRIB1
CHMP6
ZNF184
ILF2
PCCB
EMC4
MARCHF7
HEXB
GALT
MORC3
CHST12
ICMT
ZBTB45
FAM168B
MFSD4B
NLRP1
RAB14
GSN
DDX18
NMRK1
ZNF70
DPY19L4
ISOC2
H6PD
E2F6
ATP6V0E1
TRIM26
MRPL48
NDUFS7
USP45
PEX3
ADAT2
FANCG
SWSAP1
ACOT9
TIMM23B
PARG
TBPL1
CTC1
FBXO46
SMG8
ZZEF1
CYB5D2
VPS37C
PPEF1
TRAPPC3
TSACC
CCT3
MVB12A
DPP3
PRXL2C
PPP6R1
COMMD6
UCHL3
TOR1AIP1
MTRNR2L9
SRXN1
REXO4
DYNC2I1
TIMM9
KIAA0586
FAM98B
MAGI3
CEP164
LZTS3
ATP6V1E1
CRTAP
GADD45B
NDUFAB1
SMNDC1
ATG16L1
FRA10AC1
NUCKS1
CTR9
PSMD14
SLC44A1
SLC25A20
LYPLA2
TCF3
TIGD1
EIF4E2
SYT11
GON4L
RAB2A
EMC8
COX4I1
PTPN4
POU2F2
TPP2
ARMC7
NOTCH2
RFX1
STX16
DMAP1
WDR70
SMARCC2
SPOCD1
TIPARP
NFIC
ALG10B
MANBAL
UPP1
DMAC2
ZNF554
GRK6
C20orf27
KIF2C
SMIM8
RACK1
PCBP2
TCTN3
CCDC117
WASF2
MRPL12
ASXL1
UBE3B
KCTD10
TGFB1I1
KIF16B
TSEN54
CASKIN2
ABRAXAS2
TTC4
RAB11B
GADD45GIP1
KDSR
PRRG2
NOSIP
DOT1L
UNKL
RPS7
KANSL3
USP35
KCTD21
SHFL
BRIX1
DNAJC11
MFAP4
MTF2
ZNF606
RECK
VKORC1
FAM220A
ZNF77
RNF114
DARS1
CLPP
HPS6
SCAMP4
ADAT3
FPR1
ARFGEF2
DIS3
KIAA2013
CALHM5
ZNF408
ARHGAP1
ARPC3
HIPK3
MEX3C
RPS12
ARHGEF16
GFPT2
PLEKHA7
UBXN4
CLCF1
SP1
UBE2D2
CCDC22
BEGAIN
EHD2
NKIRAS2
DNAJC7
TAF5
TK1
AFMID
ASF1B
CYLD
BNIP1
TIMM22
DUS1L
PRDM8
ELMOD2
TMEM242
PDLIM7
DHX15
VARS1
INTS12
GSTCD
PDE4DIP
TGDS
XPO5
POLH
POLR2D
RAB4B
SIRT4
ZNF687
OPA3
EEF1AKMT1
ABT1
NDUFS3
KBTBD4
SEC13
ZNF256
PDE8A
RPL37
SF3A3
RPL24
POLR1H
ADAM19
CERCAM
YIF1B
TRABD
CORO1C
BCL9L
MRPL35
ZSCAN25
HINT2
USP42
BANP
EIF5A2
UNC13D
CDA
MPC2
DCAF6
RABGEF1
TRIM59
CDC5L
WDR7
OMA1
DAB1
GRHL3
SNX12
ZFAND5
HUS1
TARS2
SBDS
PRUNE1
MINDY1
COQ3
TCERG1
NUMA1
LRTOMT
INO80C
ZSWIM3
ACOT8
FAAP100
SPTBN4
UTP3
PLEKHM3
COX5A
ARHGAP24
CCDC43
RIN3
CDK5RAP1
RBM12B
MAP2K6
SPRY1
GORASP2
YTHDF2
ZFP36L1
SUGCT
MPLKIP
FUCA2
TAS1R1
NOL9
PPP2R2A
ACOT7
MTERF1
RPS6
ZNF572
C6orf226
RPS20
TEAD1
PSMD9
HPD
RPL37A
CLIP2
WDR11
CARD14
CIZ1
OPA1
SLC9A1
TTC38
DPY19L1
PRDX1
COL18A1
ZRANB2
KDM4B
H2BC10
RBM7
C11orf71
GALNT10
ZER1
ERCC1
GPR160
SNUPN
FEM1A
STAT6
MKNK2
SNRPC
SSBP2
ZCCHC3
FLVCR1
ABCC3
GOT2
DENND6A
LUC7L2
FMC1-LUC7L2
ENSA
TTI2
TIMP1
TMCO4
TCEA2
SPATC1L
NPR2
TBC1D19
NEDD1
POLR1F
TUBE1
FAM229B
SRP19
EIF3D
DEF8
ARL14EP
VTA1
NMBR
AMOTL1
LITAF
PTK6
DSN1
CCDC42
TMEM184A
H4C6
CDK11B
CDK11A
ATP5IF1
COX20
LRRCC1
SCML1
MCM7
AP4M1
S1PR4
MRPL30
MITD1
IFT46
KLHL12
MRPL1
SAR1A
HSD17B11
ZNF330
KIFBP
H2AC12
SH2D5
TADA1
CDAN1
LPIN3
UBA52
SLC27A4
SYNGR2
TIMM23
NEK6
NCOA7
PRKAR1B
IPO13
CZIB
USPL1
HMGB1
MRI1
RBM12
CPNE1
TRAM1
MCIDAS
ZNF579
CDC42BPG
RBBP5
SDAD1
CFDP1
ROBO3
ETFDH
C4orf46
HSPA6
PRKCA
HHAT
GNA13
AP2A2
ZFAT
COPS4
RPN1
WIPI2
MOSPD3
TUFM
PPAN-P2RY11
PPAN
ARHGEF11
VPS16
PCED1A
PABPN1
PMM1
PRELID2
CDK9
C4orf48
CEP78
WDR75
H4C8
RPL38
HMGN4
MTHFSD
ST6GALNAC6
IRF2BP1
NAT10
ANKRD54
VSTM2L
TRIB3
NICN1
AMZ2
IL1RAP
UBE2R2
DYNLRB1
DOLPP1
MYO1C
DENND3
CCDC97
FAM156B
FAM156A
KANSL1
PCNA
MICALL1
TACO1
LGR6
RAB5B
TMTC3
CEP290
CTDSP1
MTBP
MRPL13
PSMB3
COX16
MTMR14
GTF2H2
HERC5
ELAVL1
THAP9
SEC31A
RAN
GORAB
ABHD16A
PSMC3
TIRAP
ANKRD40
IFTAP
ZNF577
SIGMAR1
RIC8A
BET1L
TPRA1
VPS53
SIPA1L2
ZNF234
NBN
SAAL1
LIMS1
TMEM37
RHNO1
FOXM1
RBM45
PPP4R3B
ZSCAN26
PPID
PIGL
NCOR1
VCP
REXO5
ERI2
RPAP1
RGL2
SERPINB6
MYCBP2
LASP1
SYT12
POLR3E
MRPL3
CTPS1
TBL3
FAIM
ZNF713
RPS24
TMA16
YAF2
PPP1R37
PNISR
PIGK
ACTL6A
MEGF8
NIPA2
USP18
CDIN1
EIF4A2
SPRED2
MPRIP
EP400
CRK
PAFAH2
ZNF609
NDUFAF4
KLHL32
TRAF6
RAG1
UQCRQ
GDF9
AGXT2
DISC1
TMEM168
GBA
RIPOR3
ZNF655
MUC1
ZNF3
GOLGA7
SYNRG
SUMF2
MTMR12
LIN54
GTF3C3
MTOR
MTIF2
PYCR1
CIPC
THEM4
FAM214B
FAM227B
DTWD1
EIF2AK3
ZNF444
XRN1
TMEM41A
DHX16
TRIM45
C12orf57
LRRC34
ABCD3
ZNF93
STAT5A
MTFR2
GNAI2
ZNF555
AKT2
PLEKHG4
FAAP20
SELENOH
CPPED1
COA1
CATSPERZ
PHLDA2
RFC2
XRRA1
TMPRSS9
SPCS2
KLHL20
GTF3C5
MAFB
SRP68
PDCD6
CD2BP2
MGAT5B
LINS1
GPATCH3
EHBP1L1
ASB7
RMND1
ARMT1
KTN1
ELOVL6
RCAN1
ALKBH3
TOR1B
ZDHHC6
VTI1A
NANP
MYSM1
EIF5
GOLM2
RPL27
RPL10A
FAM8A1
RPL35A
IQCG
SOAT1
MSC
ZNF862
ANKRD36
EPOP
SNX3
MAPK3
STYXL1
MDH2
POC5
NEMF
TMEM170A
GTF2H2C_2
GTF2H2C
KPTN
FGFRL1
MBTPS2
RNF207
RPS3A
FBXO30
UTP23
ZNF790
PSMB2
TBX3
PARP8
NTAQ1
C17orf58
NAE1
MAD1L1
TNPO3
DHX8
TBC1D31
HNRNPA1L2
TICAM2
WDR76
GPR37
INTS5
RPL26
STXBP4
COX11
PEAK3
PEMT
ZSCAN22
PUF60
EEF1AKMT2
KHSRP
SLC29A2
BASP1
RPS16
TRAM2
RPS10-NUDT3
RPS10
MOXD1
HHIPL2
GIPR
RFX7
DCT
TSSC4
KLF5
DST
BEND6
RPS11
PIKFYVE
PDLIM1
PARVA
NOD2
B3GNT9
MARS1
ARHGAP9
MAPK1IP1L
CHCHD2
NCOA1
CRH
TTC30B
RNF213
LPAR2
HM13
TTC14
CDK20
CCZ1B
SEPTIN7
SLC26A11
IL31RA
CCDC174
MAP3K3
DCXR
ADAR
STARD3NL
FAM135A
ZNF343
C16orf95
SCYL3
ZNF724
ADCK5
ZC3HC1
ZNF286A
PADI4
PPIL3
NIF3L1
FAM133B
ANKRD46
OSBP
ASB6
SH3GLB2
ZNF391
SMN2
SMN1
TBC1D23
ANKFY1
CXXC5
ZNF546
KAT2B