ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741420 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◢ SRX2741419: SCC-9

◣ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

WDR74
MTRNR2L8
GTF2H4
PTPRF
CCDC107
PSMB6
MRPL45
VPS37D
MTRNR2L2
ZNF335
PIH1D1
ALDH16A1
TOMM7
RGPD2
RGPD1
NUDT9
TBC1D4
RNF24
SMU1
ZMAT2
UBE2V2
MRFAP1L1
HLA-E
CYRIB
NLRX1
UBE2L3
CDK12
ADRM1
CTNNBL1
TESK1
AHCY
RNF216
MELK
UBFD1
EARS2
XKR8
NR6A1
TOR1A
OSCAR
NDUFA3
CLTA
WDR43
KXD1
MED23
NEURL4
C19orf25
PHKB
ITFG1
NCOA5
PIGO
UBOX5
FASTKD5
MRFAP1
ZDHHC24
ACTN3
RIN2
ZDHHC12
SPAG8
DLAT
MCC
DPH5
RPL6
EPRS1
PREB
CFDP1
STOML2
HAX1
ZNHIT6
DAGLB
CWF19L2
SOGA1
OSGIN1
ARNT
RAC1
TERF2
PRMT1
ARHGEF1
GTF2H5
ENGASE
HRCT1
FOXK2
CRLS1
AP2A2
TIA1
PAXBP1
ZCCHC4
SMARCD2
RUSC2
ARHGEF39
UTP25
EIF3C
EIF3CL
AARS2
MLLT1
FKTN
FXN
KDM3B
TKT
EPS15
VCP
GPCPD1
ZNF131
ICMT
CDC25B
LSM14B
CLK3
GRSF1
LDLRAP1
KTN1
SCML1
SLC29A3
CCNC
PAK4
ZNF184
MAPK14
MVB12A
TLN1
CREB3
UNC93B1
AKIRIN2
LAPTM5
DRG2
TRMT1
ATG4C
TIMM23
LPAR2
ZNF638
LEO1
MATR3
DMAP1
CNOT11
EED
LARP1
EIF3D
SPHK2
RPL18
TAF1C
PDSS2
SLC35A4
APBB3
DYM
DNAJC19
MRPL54
APBA3
RPS14
FAM8A1
SP2
FBXW5
C8G
LOC730098
LUC7L2
FMC1-LUC7L2
SRXN1
GABARAPL1
HPS6
SMCO4
CLPB
FKBPL
TGDS
CDK8
POLG2
EI24
PDCL
PPP1R13L
STX16
RPL37
NACC1
MRPL58
PDCL3
SYT11
GON4L
TIMM23B
PARG
SPOCD1
NDUFS7
RBM4B
NUP85
H4C6
FANCG
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NUF2
STXBP4
COX11
GADD45GIP1
SMARCC2
PDE4A
SH2B1
TUFM
C16orf70
CCDC200
SCAMP4
ADAT3
TPM2
SLC44A1
RPL36
ADPRHL1
SLC38A10
C17orf64
GRPEL2
RPP25L
ZNF551
SLC25A25
NAIF1
ZZEF1
CYB5D2
SLC25A20
HIPK3
CEP164
ZBTB43
HEXB
TRIP4
MEGF8
TPK1
C4orf48
TARS2
RPL10A
KDSR
NMRK1
PTPN1
ADNP
PCCB
TFB1M
TENT2
MRPL35
CBX4
RBM12
CPNE1
KANSL3
PANK3
SBDS
HMGN4
ATR
RAB2A
INTS5
UIMC1
DENR
KLF5
FPR1
DHX15
ELOVL6
TRAPPC3
IL11RA
SORBS1
SGSM1
EFR3A
PDLIM7
TIMM10
FAAP100
SETD1A
SLC9A1
DHRS3
TJP3
MRPL38
CHST15
RBM39
GHITM
MEX3C
RIOX1
CSRNP1
SRRD
HPS4
ZCCHC14
PTK2B
ASXL1
MTMR14
TCF3
PTPN4
SIRT5
DNM2
MRPL44
GLIPR1L2
MEGF9
DDX18
SSBP2
CASP4
PKD2L2
HPS1
DPF2
PSMB3
CAMK2G
SMG8
MCM7
AP4M1
NUMA1
LRTOMT
UROS
BCCIP
LRRC37A3
SNRPC
TDP2
ACOT13
SPAG4
GABPB2
CCNT1
CCDC22
ZC3H15
CIC
MAP2K6
AARSD1
SSBP1
PITPNA
GK5
RECK
NFE2L2
SPATA2
GNE
ZNF555
GFUS
KRBA2
PRPSAP1
ZFAND1
NELFCD
SMG5
BMS1
PLEKHG2
SNU13
ALG10B
DCT
PKD1L2
RBM12B
TMEM242
SARS2
MRPS12
ABCC3
ATP5PD
SDAD1
MARCHF7
GSTA4
NCBP3
FDPS
CIAO3
CARD14
FLOT1
FAM168B
ATG16L1
UBE4A
CCDC117
BIRC3
TM2D1
EMC8
COX4I1
ICAM1
RABGGTA
TAF5
BEGAIN
POLR3E
TRIM59
TOR1B
PSMD5
TMEM68
TGS1
YTHDF2
RNF114
FBXO46
TMEM214
TRIM32
ASTN2
RGP1
GBA2
EVI5L
ELAVL1
PCID2
CUL4A
MGAT1
EIF3E
RAB11B
MRPL39
SEC14L1
HINT2
KIF16B
COASY
MTOR
ZFAT
GSDMD
EMC4
RCAN1
SLC45A4
RIF1
COMMD2
HSD17B11
GGCX
CCDC43
TSEN54
CASKIN2
SCFD1
MRPL12
TRAM1
ANGEL2
ROBO4
CLPP
PEX3
ADAT2
TBPL1
DHX16
LZTS3
SLC27A4
SLC26A11
VPS13B
PSMD9
HPD
TBX6
FAM220A
STRADA
TBX3
RPS12
TLE2
C9orf131
ZNF606
NANP
RBMS3
CIZ1
ATP5MC1
HIBADH
ZNF839
SLC30A6
ESCO1
TMEM267
WDR59
MANBAL
GORASP2
ARSD
MAML3
REXO5
ERI2
LAMTOR5
MAP4K1
EIF3K
HIBCH
MAD2L1BP
GBA
SNX16
MTRNR2L9
NUCKS1
RFX1
GOLM2
NPAS4
CACTIN
METTL14
SLC25A16
SPATC1L
ZBTB3
GADD45B
RBBP5
LTO1
CHST12
CABLES2
UBE2F
PPP5D1
CALM3
MTRNR2L10
ZNF77
TCTN3
SLC35B1
CLUAP1
RPS7
RPL27
GTF3C3
ZBTB40
NAE1
TACO1
LGR6
NPR2
KDM1A
RAB14
GSN
ELP3
SLC31A1
FKBP15
TDRD7
PSMD4
RMND1
ARMT1
PPP6C
CDK5RAP1
MTF2
DPY19L4
ILF2
WASF2
SRPK1
STAT3
HUS1
SPC24
ZSCAN25
PCBD2
REXO4
MTBP
MRPL13
RAB4B
UBXN4
RNF213
MKNK2
SWSAP1
COMMD6
COPS4
DPP3
INTS12
GSTCD
TMEM41A
TGFB1I1
AP2S1
GRK1
RAD52
UCHL3
KLHDC9
SYMPK
FOXA3
DYNC2I1
SF3A3
TIGD1
MAD1L1
EIF4E2
ZNF234
RNF187
COX7A2
TRIM26
RAB5B
ZSCAN9
VPS37C
USP35
KCTD21
MRI1
DOLPP1
WDR70
ERCC6L2
ATF6
AP3B1
POLR1H
NICN1
PGK1
DMAC2
RFX7
C8orf37
UTP3
ISOC2
ATP5MC3
RCC1
NOL11
BRAP
ACAD10
ZBTB45
LMO7
AURKAIP1
FAF1
ANXA2
PAFAH2
PPP6R1
ZDHHC5
SIRT4
SEMA4B
MRPS14
ADAM19
TBC1D19
NDUFS5
RCN1
UBE2Q1
SEC13
SYT7
RPS6
RPL38
RABGEF1
RAB5C
RPL37A
COX16
TIMM9
ST6GALNAC4
KIAA0586
INO80C
SLC35E2B
AMZ2
DSTYK
PPEF1
ABRAXAS2
PLEKHM3
CYB5R4
TTC38
CHMP6
GPSM2
ENSA
COX5A
GALNT10
PDE4DIP
ASF1B
TRMT2A
RANBP1
KIF2C
GTF2H2
MDGA1
PRRG2
NOSIP
TFPT
PRPF31
IL1RAP
MTERF1
VKORC1
CTR9
STXBP3
FAM200B
MFSD4B
AKT2
TMEM161A
TSACC
CCT3
NEMF
ZNF687
TSC1
GFI1B
FBXL19
EIF2D
PMM1
EIF4A2
ECSIT
RPN1
LPP
SYNGR2
RBM45
TOM1L2
DRC3
H6PD
GEMIN6
DPY19L1
SHFL
PRELID2
NOTCH2
INKA2
DEF8
DDX20
NIPA2
ZER1
ARL14EP
BRIX1
GAMT
NME1
NDUFAB1
CYLD
PTPRA
LAMP3
WIPI2
OPA3
ERCC1
EIF3F
CDA
SLC12A9
NLRP1
KLHL20
EPHB4
SLC25A44
DRAM2
CEPT1
YEATS2
UQCR11
MTR
PRUNE1
MINDY1
PRDX1
TCIRG1
RPS29
PRKAB2
PPIL3
NIF3L1
CHD1L
USP45
ZNF572
XKR7
AGBL3
CLCF1
OPA1
FAM133B
EEF1AKMT1
CERCAM
BNIP1
MRPS15
ZSWIM3
SP1
ACOT8
S1PR4
MARS1
ARHGAP9
ARHGAP24
TTC21B
DOT1L
TMEM18
RPL24
EIF5A
SYNJ2
POU2F2
NEDD1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
NEK6
ZNF554
VTA1
NMBR
GPR160
CDC5L
NKIRAS2
DNAJC7
EHD2
AP1G1
TSSC4
CASC3
WDR7
MED18
TRIM45
LRRC59
ANKRD46
ZMPSTE24
DCP1A
RRP15
LMTK3
ZNF582
PSMF1
OSBP
ZNF408
ARHGAP1
SH2D5
MRPL3
MAP3K10
TATDN1
OMA1
NUTM1
NOP10
NDUFB9
DAB1
CDK9
ACOT9
ITGB3BP
EFCAB7
ATAD2
ASB6
NCOA7
GNG7
ADA
MDFIC
PGBD2
HM13
C6orf226
KCTD18
NUDT8
MTIF2
ROBO3
NDUFC2-KCTD14
NDUFC2
NBN
CTPS1
ZFP36L1
MRPL30
MITD1
NIPA1
DST
DNAJC25-GNG10
DNAJC25
C8orf76
BEND6
ALKBH3
EIF1AD
BANF1
IQSEC3
IFT46
IFTAP
ZFAND4
ZCCHC3
VAT1
GALNT11
USP42
MRPS33
H4C3
SNRPE
MTHFSD
E2F6
ATXN7L2
CTC1
BANP
PNPLA6
ARFGEF2
ANKRD13C
COL6A1
AMOTL1
MOSPD3
GTF3C5
RPS20
COL18A1
INTS2
GALT
TFAM
STX18
PLEKHG4
POLG
FUT10
SNUPN
GRK6
PRCD
FLVCR1
PARP2
MRPL48
ABCB8
ADAR
SMIM8
SH3GLB2
EPOP
TBL3
SLC66A3
COQ3
RPAP1
SAAL1
MYO1C
MAP11
SEC62
TPP2
PRRT3
FRA10AC1
KIF3B
ST6GALNAC6
RBIS
LSG1
STARD3NL
RIPOR3
UBE3B
TCERG1
TADA1
KCTD10
TRIB1
TIMM22
PYCR1
SNRPB
MELTF
SUGCT
MPLKIP
KDELR2
CDK11B
CDK11A
MAPK1IP1L
FAAP20
SELENOH
WDR36
HTR5A
HEATR1
EIF5A2
RPL26
C1orf127
ZNF443
ETFDH
C4orf46
CCDC42
ZNF609
FAIM
DIPK1B
SPAG16
MBD4
IFT122
MMS22L
MRPS10
KCNIP3
ATF2
OLFM2
POLI
TTC14
POFUT1
PLAGL2
NES
UPP1
POLR2J
RPL13
PRKAR1B
NSUN4
ZC3H6
TTC26
SCAND1
RGL2
LITAF
GRHL3
POLR1F
KDM3A
INTS9
HMBOX1
FUCA2
CELSR3
RARS1
ARHGEF16
RNFT1
DECR1
TRIM41
UQCC1
PPP6R3
MRPS17
C20orf27
POLR2J3
HERC5
CGGBP1
C3orf38
PIGBOS1
PIGB
FAM135A
CYREN
SNAP47
JMJD4
HSPA6
YIF1B
PIP5KL1
TIMM17A
PKN3
FBXW9
FCHO1
DDX1
FAM98B
COPS7A
ALG10
TMEM170A
BCAS3
COQ7
SNX8
TBRG4
PTK6
GTF2H2C_2
GTF2H2C
TBL1X
SERPINB6
PPP4R3B
KCTD3
HIF1AN
DTD1
ZNF165
VARS1
CPPED1
MRPS28
MAIP1
ZNF764
PIH1D2
NKAPD1
EFHD1
B4GAT1
ARPC3
ABT1
RBL1
NDUFS3
KBTBD4
ARL4A
TRABD
TIPARP
RBM28
ZNF577
ZNF181
WDR31
LY96
DNMT1
CIPC
METTL25
IPO13
DUS1L
CHCHD2
CCDC59
ID1
BCAR3
NDUFAF4
KLHL32
TUBGCP3
PRDM8
LIMS1
KLHL12
CDK20
DAB2
GALK1
CDC42
SDHAF3
SNRPB2
SIGMAR1
KPTN
KIAA0895
ZNF655
TRAF6
THEM4
RAG1
MUC1
CCZ1B
UBE2S
SEPTIN7
CYP51A1
UNC13B
TNPO3
ZRANB2
ZDHHC6
WDR38
VTI1A
PFDN4
CORO1C
ZNF713
PEAK3
DIS3
ZKSCAN2
TMTC3
TCP11L1
CEP290
ZNF391