ChIP-Atlas: Target genes

Potential target genes for CHD4

Query protein: CHD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2741419 | SCC-9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD4's Target genes

◢ CHD4: Average

◢ SRX5167213: Acute myeloid leukemia

◢ SRX5167215: Acute myeloid leukemia

◢ SRX5167211: Bone marrow nuclear cells

◢ SRX377962: Glioblastoma

◢ SRX377963: Glioblastoma

◢ SRX116431: K-562

◢ SRX186706: K-562

◢ SRX1181994: LNCAP

◢ SRX6763471: Macrophages

◢ SRX6763472: Macrophages

◢ SRX5167217: Nuclear cells

◢ SRX3460919: Pre-B cells

◢ SRX2741418: SCC-9

◣ SRX2741419: SCC-9

◢ SRX2741420: SCC-9

◢ SRX2741422: SCC-9

◢ SRX2741423: SCC-9

◢ SRX2741424: SCC-9

◢ SRX5260950: U-937

◢ SRX5260952: U-937

◢ CHD4: STRING

GTF2H4
WDR74
MTRNR2L8
VPS37D
CCDC107
ZNF335
PSMB6
PTPRF
CYRIB
MRPL45
TBC1D4
ZMAT2
NEURL4
NUDT9
HLA-E
ENGASE
MTRNR2L2
PRMT1
RNF24
RNF216
PIH1D1
ALDH16A1
ADRM1
SMU1
KXD1
ZDHHC12
CTNNBL1
NLRX1
AHCY
TESK1
UBFD1
EARS2
SLC31A1
FKBP15
NCOA5
SP2
MELK
MED23
MRFAP1L1
OSCAR
NDUFA3
TOMM7
TOR1A
RGPD2
RGPD1
UBE2V2
WDR59
ATP5PD
WDR43
SMCO4
PIGO
NR6A1
C19orf25
XKR8
STOML2
CLTA
CNOT11
SLC29A3
DPH5
CIAO3
TCTN3
TLN1
CREB3
FBXW5
C8G
CDK12
CLPB
RBM39
MCC
GRSF1
PREB
RIN2
RPS14
MRFAP1
PHKB
ITFG1
CWF19L2
NUP85
CHMP6
EI24
LTO1
EPRS1
TIA1
SCFD1
FXN
MATR3
UBOX5
FASTKD5
DYM
AARS2
SRRD
HPS4
ZCCHC14
SGSM1
KDM3B
EED
TRMT1
CABLES2
UBE2L3
ELP3
PAXBP1
CACTIN
DRG2
AP2S1
UTP25
CLPP
ZCCHC4
NPR2
TACO1
LSM14B
EMC8
COX4I1
ZNF131
ICMT
MTRNR2L9
SMARCD2
PRPSAP1
RFX1
SLC25A20
PTPN1
SOGA1
DNAJC19
HRCT1
LOC730098
MTOR
SYNJ2
SPAG8
ZDHHC24
ACTN3
TDRD7
MLLT1
GABARAPL1
DLAT
ARHGEF39
ZNHIT6
TENT2
UTP3
FANCG
SIRT5
SLC25A16
RCN1
TAF1C
RIF1
MTBP
MRPL13
OSGIN1
UNC93B1
CDK8
ANKRD46
TKT
GPCPD1
COASY
SYMPK
FOXA3
RAB5B
RBM4B
ARNT
RPL6
GGCX
EPS15
UIMC1
DMAP1
CRLS1
MAPK14
PEX3
ADAT2
STX16
ST6GALNAC4
SLC38A10
GHITM
PKD1L2
EEF1AKMT1
KCTD18
ARHGEF1
RAC1
TTC38
PDE4A
SLC35A4
APBB3
UBXN4
PSMD4
METTL14
TRABD
CDC25B
CEP164
FKTN
SARS2
MRPS12
RFX7
RAB14
GSN
VPS13B
SF3A3
SLC25A25
NAIF1
CLCF1
CDAN1
DAGLB
TCF3
IL1RAP
TIPIN
NDUFS7
ADNP
DPY19L4
CLK3
AKIRIN2
CLUAP1
DMAC2
ZFAND1
FOXK2
PSMB3
SYT11
GON4L
LMTK3
C6orf226
RPL36
NUCKS1
HUS1
RAD52
CIZ1
RUSC2
ST6GALNAC6
SSBP1
SMG8
MRPL38
PPP6C
ZFAT
MDFIC
PDCL3
ZNF638
PKD2L2
DPP3
TIMM23B
PARG
ELOVL6
PPIL3
NIF3L1
GSTA4
SRXN1
COX16
ENSA
FAM200B
CFDP1
GORASP2
FLOT1
ADAMTSL5
SLC30A6
GNE
SPATA2
TRIP4
LARP1
GADD45B
ATG4C
RBM45
ELK3
UBE4A
ZC3H15
PAK4
SNU13
POLG2
CDK5RAP1
WDR70
RBM12
CPNE1
EIF3C
GLIPR1L2
LAPTM5
MVB12A
SCAMP4
ADAT3
SEC13
MMS22L
ATG16L1
AP3B1
USP45
PDSS2
ZNF184
NELFCD
DAB2
MEGF9
PITPNA
SIRT4
TGDS
PMM1
RPL37A
COX5A
TSACC
CCT3
CHST15
HAX1
NEDD1
PLEKHG4
TBRG4
MRPL35
FAF1
RPS6
HIBADH
ARFGEF2
CCNC
TRAPPC3
HNRNPD
PPP1R13L
AARSD1
NEMF
TRAPPC9
ZNF764
PCCB
ZSCAN9
NLRP1
KLHL20
CASC3
ACOT9
VKORC1
TRIM45
GRAMD2B
TPM2
RPL10A
TMEM214
MARS1
ARHGAP9
FPR1
SLC44A1
EIF2D
GEMIN6
FAIM
COMMD6
UCHL3
POU2F2
COL18A1
MADCAM1
RPP25L
IL31RA
KIF16B
COX7A2
INO80C
GPSM2
NIPA2
CHERP
EIF3CL
ATF6
BRIX1
ERCC1
SELENOH
RAB11B
EMC4
NICN1
NDUFS5
CCDC42
EEF1G
PDCL
MTF2
ZZEF1
CYB5D2
CDA
DIPK1B
CCNT1
C9orf131
GTF2H5
HPS1
RAB5C
CDC5L
RAN
TPK1
LIMS1
ZNF789
RAB2A
SYNGR2
RBM12B
WDR7
NBN
SLC35B1
IL11RA
DYNC2I1
LPAR2
MAP3K10
MRPS33
SRI
DHX16
RIC8A
BET1L
HMGN4
HPS6
ADPRHL1
PCBD2
TRMT2A
RANBP1
FGFRL1
ZNRF1
SETD1A
PLEKHG2
BRAP
ACAD10
KRBA2
MAD1L1
MANBAL
ICAM1
ECSIT
WIPI2
NKIRAS2
DNAJC7
FKBPL
ZBTB3
ISOC2
ZER1
NDUFAB1
TMEM200B
TOM1L2
DRC3
EIF3F
MEX3C
GRHL3
CPT1A
SLC12A9
EPHB4
HINT2
CARD14
ATP5MC1
RPAP1
CTR9
TMEM41A
LMO7
RPL38
ATXN7L2
ZNF234
DOLPP1
YIF1B
COPS4
DEF8
PFDN4
ZNF93
RABGEF1
H4C6
UBE2Q1
C8orf76
RPN1
REXO5
ERI2
CTC1
ECHDC2
ARHGAP24
UROS
BCCIP
SLC27A4
GSDMD
AP3M2
GNA13
GBA
SNX16
CCDC200
GOLM2
TFB1M
NPAS4
LUC7L2
TJP3
SPHK2
RPL18
FMC1-LUC7L2
AP2A2
DNM2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SPATC1L
SH2B1
RBBP5
CHST12
TERF2
UBE2F
PPP5D1
CALM3
MTRNR2L10
ZNF77
RPS7
TMEM242
RPL27
GTF3C3
SLC9A1
ZBTB40
NAE1
LGR6
EIF3E
NUF2
PTK2B
KDM1A
EFR3A
KANSL3
LDLRAP1
MRPL44
TBX6
RMND1
MRPL54
ARMT1
APBA3
PDLIM7
ILF2
MEGF8
WASF2
SRPK1
STAT3
SPC24
ZSCAN25
DDX18
RGP1
GBA2
REXO4
RAB4B
RNF213
MKNK2
SWSAP1
CCDC22
INTS12
GSTCD
SPAG4
TGFB1I1
PSMD9
HPD
LRRC37A3
GRK1
COMMD2
KLHDC9
RPL37
CBX4
ALG10B
PANK3
ZNF555
TIGD1
EIF4E2
TIMM10
TARS2
RNF187
ZNF606
TRIM26
ATR
SORBS1
MRPL39
HIBCH
VPS37C
USP35
NCBP3
KCTD21
NACC1
MRI1
ZNF551
ERCC6L2
POLR1H
PGK1
TSEN54
CASKIN2
CIC
C8orf37
ATP5MC3
SMG5
RCC1
NOL11
MRPL12
GADD45GIP1
TBPL1
ZBTB45
AURKAIP1
DCT
GK5
ANXA2
PAFAH2
PPP6R1
ZDHHC5
SEMA4B
RECK
MRPS14
ADAM19
DHX15
C17orf64
TBC1D19
DENR
KTN1
GRPEL2
SYT7
VCP
YTHDF2
GABPB2
SBDS
ASXL1
TIMM9
KIAA0586
SLC35E2B
AMZ2
KDSR
DSTYK
RNF114
PPEF1
MTMR14
ABRAXAS2
LEO1
EIF3D
SNRPC
PLEKHM3
CYB5R4
BEGAIN
GALNT10
PDE4DIP
ASF1B
KIF2C
GTF2H2
NFE2L2
MDGA1
RIOX1
PRRG2
NOSIP
SDAD1
TFPT
PRPF31
FAM168B
MTERF1
FAM8A1
STXBP3
SMARCC2
MFSD4B
AKT2
TMEM161A
ZNF687
TSC1
GFI1B
FBXL19
EIF4A2
LPP
H6PD
DPY19L1
SHFL
PRELID2
NOTCH2
SSBP2
INKA2
DDX20
LZTS3
ARL14EP
ZBTB43
SPOCD1
POLR3E
GAMT
SCML1
NME1
MRPL58
MARCHF7
CYLD
PTPRA
HEXB
TRIM32
ASTN2
LAMP3
OPA3
PTPN4
SLC25A44
DRAM2
CEPT1
CCDC117
YEATS2
UQCR11
MTR
C16orf70
PRUNE1
MINDY1
PRDX1
TIMM23
TCIRG1
RPS29
PRKAB2
CHD1L
ZNF572
XKR7
MCM7
AP4M1
AGBL3
OPA1
NMRK1
FAM133B
CERCAM
BNIP1
MRPS15
ZSWIM3
SP1
ACOT8
S1PR4
TTC21B
DOT1L
TMEM18
RPL24
EIF5A
MAD2L1BP
INTS5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TRIM59
TDP2
NEK6
ACOT13
ZNF554
VTA1
NMBR
GPR160
EHD2
AP1G1
TSSC4
RCAN1
MED18
LRRC59
ZMPSTE24
DCP1A
RRP15
ZNF582
PSMF1
OSBP
ZNF408
ARHGAP1
SH2D5
MRPL3
TATDN1
OMA1
NUTM1
NOP10
NDUFB9
DAB1
CDK9
ITGB3BP
EFCAB7
ATAD2
ASB6
MAP2K6
EVI5L
NCOA7
GNG7
ADA
PGBD2
HM13
NUDT8
MTIF2
KLF5
ROBO3
NDUFC2-KCTD14
NDUFC2
CTPS1
ZFP36L1
MRPL30
MITD1
NIPA1
DST
DNAJC25-GNG10
DNAJC25
BEND6
ALKBH3
EIF1AD
BANF1
IQSEC3
IFT46
IFTAP
ZFAND4
ZCCHC3
VAT1
GALNT11
USP42
H4C3
SNRPE
RABGGTA
MTHFSD
E2F6
C4orf48
BANP
PNPLA6
ANKRD13C
COL6A1
AMOTL1
MOSPD3
GTF3C5
RPS20
INTS2
GALT
TFAM
STX18
POLG
FUT10
SNUPN
GRK6
PRCD
FLVCR1
PARP2
MRPL48
ARSD
ABCB8
ADAR
SMIM8
SH3GLB2
EPOP
TBL3
SLC66A3
COQ3
SAAL1
MYO1C
MAP11
TAF5
SEC62
FAM220A
TPP2
PRRT3
FRA10AC1
KIF3B
RBIS
LSG1
TUFM
STARD3NL
RIPOR3
UBE3B
TCERG1
TADA1
KCTD10
TRIB1
TIMM22
BMS1
PYCR1
SNRPB
MELTF
SUGCT
MPLKIP
KDELR2
CDK11B
CDK11A
MAPK1IP1L
FAAP20
WDR36
TOR1B
HTR5A
HEATR1
EIF5A2
RPL26
C1orf127
ZNF443
ETFDH
C4orf46
ZNF609
ESCO1
SPAG16
MBD4
IFT122
STXBP4
RPS12
MRPS10
KCNIP3
COX11
ATF2
OLFM2
POLI
TTC14
POFUT1
PLAGL2
NES
CCDC43
UPP1
POLR2J
RPL13
PRKAR1B
NSUN4
ZC3H6
TTC26
SCAND1
RGL2
LITAF
POLR1F
KDM3A
INTS9
HMBOX1
FUCA2
CELSR3
RARS1
ARHGEF16
RNFT1
DECR1
TRIM41
UQCC1
PPP6R3
MRPS17
C20orf27
POLR2J3
HERC5
ELAVL1
CGGBP1
C3orf38
PIGBOS1
PIGB
FAM135A
CYREN
SNAP47
SEC14L1
JMJD4
HSPA6
PIP5KL1
TIMM17A
PKN3
FBXW9
FCHO1
DDX1
FAM98B
COPS7A
ALG10
TMEM170A
BCAS3
COQ7
SNX8
PTK6
GTF2H2C_2
GTF2H2C
TBL1X
SERPINB6
PPP4R3B
KCTD3
HIF1AN
DTD1
ZNF165
VARS1
CPPED1
MRPS28
MAIP1
PIH1D2
NKAPD1
EFHD1
B4GAT1
ARPC3
ABT1
RBL1
NDUFS3
KBTBD4
CASP4
ARL4A
TIPARP
RBM28
ZNF577
ZNF181
WDR31
LY96
HIPK3
DNMT1
CIPC
METTL25
IPO13
DUS1L
CHCHD2
CCDC59
ID1
BCAR3
NDUFAF4
KLHL32
TUBGCP3
PRDM8
KLHL12
CDK20
GALK1
CDC42
SDHAF3
SNRPB2
SIGMAR1
KPTN
KIAA0895
ZNF655
TRAF6
THEM4
RAG1
MUC1
CCZ1B
UBE2S
SEPTIN7
CYP51A1
UNC13B
TNPO3
ZRANB2
ZDHHC6
WDR38
VTI1A
CORO1C
ZNF713
PEAK3
DIS3
ZKSCAN2
TRAM1
TMTC3
TCP11L1
FBXO46
CEP290
ZNF391
GLIS2
ZSWIM4
ZNF3
SURF6
METTL18
C1orf112
TAS1R1
RGPD8
RGPD6
RGPD5