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If a database is inadequate in terms of its description, unclear with respect to the terms of use, or is not downloadable, it may not be fully used, cited or rightly acknowledged by the (research) communities. This is even true for databases with high-quality datasets.

The Life Science Database Archive maintains and stores the datasets generated by life scientists in Japan in a long-term and stable state as national public goods. The Archive makes it easier for many people to search datasets by metadata (description of datasets) in a unified format, and to access and download the datasets with clear terms of use (see here for detailed descriptions).

In addition, the Archive provides datasets in forms friendly to different types of users in public and private institutions, and thereby supports further contribution of each research to life science.

データベースアーカイブ説明図
Archived Databases
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Showing 26 to 30 of 89 entries
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Database name Maintenance site Principal creator Database classification Organism Summary License
The Institute of Medical Science, The University of Tokyoopen_in_new Toshihisa Takagi Metabolic and Signaling Pathways Model species (Homo sapiens, Mus musculus, Rattus norvegicus) etc.

The database is a highly structured, manually curated database of signal transduction pathways.

CC BY-SA
Detail
Kazusa DNA Research Institute open_in_new Satoshi Tabata Plant Genome Plant, Algae, Green algae

The database of general information, DNA markers, QTLs, DB links and genome analysis methods of plants including model plants.

CC BY-SA
Detail
National Institute of Industrial Science and Technology (AIST), Tokyo Waterfront open_in_new Suwa Makiko Protein Sequence Bacteria, Archaea, Eukaryota
The database in which protein coding regions in genomes are assigned to three-dimensional structures.
CC BY-SA
Detail
National Institute of Industrial Science and Technology (AIST), Tokyo Waterfront open_in_new Wataru Nemoto Protein Structure human
The database provides information about GPCR oligomerization.
CC BY-SA
Detail
National Institute of Technologyopen_in_new Ken Kurokawa Genome Information Archaea, Bacteria, Fungi

The database is integrating various microbiological knowledge centered on genome information.

CC BY-SA
Detail
Database name Maintenance site Principal creator Database classification Organism Summary License