ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748434 | HCT 116
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◣ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
MIA2
SEPTIN4
MTRNR2L8
CRYBG2
ACSL5
URGCP-MRPS24
URGCP
SKIV2L
NELFE
LENG8
CCDC107
PHF12
NEK2
EPS8L2
DEAF1
NCS1
NR1I3
ATXN7L1
C2CD2L
ADAMTS6
CLCF1
LTB4R
LTB4R2
CIDEB
NDUFS1
EEF1B2
CDHR2
C11orf86
GPX4
C19orf33
CSTF1
AURKA
PCNX3
MAP3K11
HDGF
SLC20A1
CYP17A1
CHST11
SIAH2
SEC13
SPON1
KDM6B
SLC27A5
SPAAR
HRCT1
SLC9A3R1
PLXNB2
ERICH3
MTRNR2L2
MSH3
DHFR
TIGD3
RAPGEF1
ABCC3
EXOC1
SLC41A2
SNTB2
CFL1
FCHO2
RGS3
SFRP5
AP1AR
IRX4
CAMK2G
LOC100509620
CREB3L3
S100A16
KPNA7
INAVA
FHL2
SCARB1
KIAA2013
PEMT
ITGA3
PTP4A1
ANKRD66
RAB17
TDP2
ACOT13
ERBB3
PLA2G2E
B3GNT3
GNAL
SERINC2
INTS4
CCDC90B
ACY1
ABHD12B
ROCK2
BMP1
SYT12
ZFP36
PLEKHG2
POLD4
SPG7
TOB2
CDC14B
LASP1
IL20RB
KIF4B
PCBP1
FUT5
PRKCD
C19orf12
PEX11G
RCOR2
SMIM29
CITED2
ZNF764
TJP3
ADRA1B
USP37
CNOT9
ENDOD1
ERBB2
SMAD3
RBKS
BABAM2
ARHGAP27
MTFMT
C1QTNF1
DHRS3
TNFRSF10B
ABLIM1
ATP5F1D
MIDN
PAX2
PIM3
DNAJC25-GNG10
DNAJC25
DYRK1A
TINAGL1
PLIN1
ACAA2
TMEM214
ROMO1
NFS1
TLCD4-RWDD3
TLCD4
BAAT
SLC38A10
SHTN1
INPP5J
TAB2
OXCT2
UBE2R2
ZC3H12D
SH3D21
GUCA2A
ARNT
KMT5A
PPP1R12B
PLK2
RAD50
DOCK5
MBD3
CD86
CA9
ARHGEF39
USP2
IST1
SECTM1
SH3D19
RPS3A
MAP4K5
ATL1
SMIM19
SLC20A2
ZFAND3
GPR171
SPTBN4
BLVRB
MEAK7
PHOSPHO1
GAB1
PTPRF
STAP2
MPND
ALDH2
ALDH3A1
ZNF696
GOLGA4
PRMT2
CENPVL2
CENPVL1
KRTAP5-7
RASSF5
CCL20
NGRN
KNL1
CEP152
GNB1
MTRNR2L1
TOGARAM1
KLHL28
SLC39A6
RIPK4
EDEM1
ERCC6L
ZNF219
MTMR4
TRIM55
NQO2
AFF1
PABPN1
GJB1
LHB
LBX2
MYD88
ACAA1
C2CD2
SESTD1
IGF2BP3
RASSF2
ELL
ZNF564
RNF217
METTL7B
DENND5B
CTSO
SH2D5
ZSWIM7
TTC19
C10orf90
SEC23A
RARA
PLCXD2
TMEM171
TMEM169
PECR
PHETA1
PRDM10
MPI
TBC1D10A
SH3BP5L
CORO1C
PLEKHG3
FBXO46
MLLT10
TTC31
CCDC142
RBP2
PRUNE1
MINDY1
CREBRF
DIS3L
ALDH3A2
PPP1R27
MCRIP1
ARPIN-AP3S2
ARPIN
SDC1
VGLL4
IQGAP2
SPDYE14
SPDYE10P
MVP
UBTF
OCIAD2
SGO1
PCYT1A
DENND1B
SPINT2
RGPD2
RGPD1
SELENOP
SLC19A3
TRIM2
SLC7A5
PDE11A
MTMR11
COPZ1
MYOG
VTN
SARM1
PDGFB
MGST2
PYY
NAGS
PRAP1
MIA3
MRPS11
MRPL46
SF1
TRAPPC4
RPS25
CHCHD2
CERS2
TACR2
IGSF23
BIRC2
NRCAM
WDR27
C6orf120
GSTM5
MMACHC
CCDC163
MLF2
RCOR1
PRR7
BAZ1B
LAMP3
ADI1
MAFG
NR1D1
IQCN
DCLK1
SHISA5
SERPINB1
PIKFYVE
DBP
PRR3
GNL1
SCAF11
NR6A1
HOXA3
BEND7
KDM4B
AHCY
CLASP1
PLAAT3
NEDD4L
NUDCD1
PNPLA1
ATG16L1
BORCS7
METTL27
ARHGDIA
KRT86
LIPK
MIIP
IFRD1
SRSF11
LRRC40
TRMT11
DOT1L
ANO1
GPR137
C11orf24
TDRD1
CCDC186
CD2BP2
FAM3C
OAF
IL32
POLRMT
CTSE
DHRS7B
EPS8L3
MBLAC1
RFFL
KLF6
APOA1
SPTBN1
SF3A2
PLEKHJ1
RPL23A
RAB34
APBA2
HERC5
EEPD1
RBIS
MXD3
TTI2
GFM1
ALDH3B1
FAM185A
TMEM120A
PLAA
IFT74
COPS4
MBNL2
PLEC
CPLX2
PERP
BLVRA
SH3BGRL2
MOV10L1
TIRAP
MTFR2
DNAJC22
RAB43
ALDH4A1
PYCARD
DKK4
SHPK
CTNS
VWA7
EMP1
AHSP
KLRC3
GNPDA1
MSLN
NIBAN2
SMYD5
CRPPA
C10orf105
PTS
LY75-CD302
LY75
SOD2
SLC25A28
SMARCA4
PPP1R9B
PPM1D
CDC42EP4
C2orf88
TMEM71
PHF20L1
PYGL
ASB2
MYBPH
MFAP4
GLTP
PDXP
UNK
H3-3B
PTPN23
RABGGTB
IRF2BP2
GADD45A
BEST3
FHDC1
ARHGAP32
IDH1
KRT18
IRAK2
INTS9
HMBOX1
YARS1
S100PBP
APOL4
TEAD4
TBC1D23
GLRX
TKFC
DDB1
UBR4
C1orf174
SPATA18
ROM1
EML3
PANK1
TRIM14
DKK1
AMN1
TPD52
CDK11A
PPP1R15B
BLCAP
SMARCD2
SLCO2B1
PGLYRP2
PACSIN2
NOSTRIN
ZC3H10
RPL41
SQSTM1
MGAT4B
ARTN
CPHXL
ASAP2
CDC6
TUBAL3
CBY3
RCAN1
SFXN3
PDZD7
TECTB
HPS5
GTF2H1
COQ5
PHC2
CEBPG
SOS1
PLXDC1
NCSTN
COPA
PEPD
PTK7
PRSS8
CLRN3
CIBAR2
TNFRSF1A
ISL2
MRPS30
LSM1
BAG4
WDR81
APOBEC1
ANXA11
ERICH4
DMAC2
FIGNL1
RPL34
GPT
UGDH
TBP
PSMB1
ZDHHC8
IRAG1
NECTIN1
CSNK1A1
TTI1
RPRD1B
KIF21B
TCTEX1D4
BTBD19
EGLN1
GABARAPL1
TTC36
TMEM25
ZNF512B
UFL1
KRT19
HNMT
PPIP5K2
GIN1
MSH5
CLIC1
CDKN1A
AFAP1
LOC389199
ENTPD2
U2SURP
KIAA1549L
SSTR5
PNPLA2
CIDEC
INF2
SEMA3B
WDR77
ATP5PB
LRRC1
HMOX1
PITPNM1
PRMT1
POMGNT1
LURAP1
PDGFRL
LRP1
SELENOI
ADGRF3
ETV4
CMPK1
EREG
ARSA
RPL13
HSPE1-MOB4
HSPE1
HSPD1
TMEM254
SPAG8
HINT2
CDC25A
YAP1
SFR1
PHACTR4
RNF5
AGPAT1
ADGRB1
MRPL2
KLC4
PRKAR1A
GRAMD4
TBCA
HCN3
CLK2
ACOX2
CASTOR2
CHMP4B
ACSL1
ZNF326
AWAT1
PMVK
CNOT2
KLRC2
MYRF
RSPH3
ARHGAP29
LINS1
ASB7
IDNK
PARP4
BLOC1S5
BRCA1
CAPN2
IER5L
TMEM120B
NAE1
RHOC
HKDC1
STN1
NFXL1
JUND
C6orf132
FDXACB1
C11orf1
HDHD5
CCND2
RPS15
LAMB2
CLNS1A
ARHGAP45
PSPN
ALKBH7
GATAD1
RAB30
RUNDC3A
FRG2
BEGAIN
ZBTB47
GCLC
TIMMDC1
NFIB
SLF1
KIAA0825
MAPK8
MICAL1
MLXIPL
SLC38A3
NFE2L1
CYP26B1
PPIH
SLC2A9
USH1G
ABCC2
ACIN1
C14orf119
GAL3ST1
HPCAL1
KIF16B
ZP3
SRSF4
LPIN1
TAGLN2
P2RY4
TRIM6-TRIM34
TRIM6
VPS54
H1-0
GCAT
FGF23
PPP2R5B
TMEM17
CLDN4
PJA2
SIVA1
RAB5IF
RPGRIP1L
FTO
PDPK1
OVOL1
STX18
PTK6
G6PC2
ABHD2
AQP1
MYL12B
ATP5MC3
HSD17B4
DAD1
PRXL2A
DNMBP
ZNF367
SFT2D3
SLC35F4
FAM86B1
GADD45G
SNRPF
TES
ARPP19
PNOC
ASAH1
GBGT1
TLN2
RNF125
CORO2A
HSPA5
KRT7
MTHFS
STK11
DAPP1
SLC26A6
ZMYND8
DTX4
PTGR2
SMARCE1
ACTG2
DIDO1
CRK
FAM102A
RPL26L1
PRKCSH
CCDC151
DCLRE1C
RTL10
GNB1L
C3orf52
IBTK
LRCOL1
TBX1
GDA
RPL27
PHF5A
ACO2
SCARA5
ARHGAP10
DEFB128
TRIM15
TRIM10
CERS4
KATNB1
PFN1
ENO3
KCTD14
RASSF1
MLPH
KIF21A
SLC31A1
FKBP15
USP16
CCNI
MUC5AC
OSGIN1
HAO1
IRF2BPL
FLVCR2
HNRNPH1
OGFOD2
RAB37
ZFAND2A
ZNF184
RENBP
CMIP
MMP20
PELO
ITGA1
TRPC4AP
RFX2
RFT1
SMARCD1
PLIN4
STK40
GOLGA8B
CYFIP1
MTIF2
VPS28
PPP1CC
TRIM29
SUCO
TAOK3
SUDS3
LSM14A
TOMM70
LNP1
FLVCR1
UBA5
B4GALT1
POT1
KREMEN2
PAQR4
TCP1
MRPL18
LRRC6
OGA
SLC6A9
PTDSS2
ANO9
TUBG2
KRT8
KDM2A
PRR5
GATAD2A
SMIM14
SPATA25
NEURL2
CTSA
PWP1
SPO11
CEP128
PRDX6
RBM7
C11orf71
MRPL4
STAT6
NAT2
GPD2
EFNA1
EPS8
PDSS2
POLR2H
CLCN2
C1QTNF6
REG4
CLDN14
MOGAT2
SAXO2
EFL1
ELFN2
NRL
DCAF11
PSMA5
PLA2G4C
SLC26A1
MAP2K3
TOMM40
MRPS28
MUC20
NUB1
CNIH3
PMEPA1
CYB5R3
PCGF5
WWC1
PPP1R2
RNF114
CLIP2
LARP1
LAPTM4A
TLN1
CREB3
CDC14A
RPP25L
TMOD1
ANGPTL4
ARHGEF5
IGSF9B
BCL9L
LOC730098
CCL27
UBC
UGGT2
CISD3
RBM8A
GLIPR1L1
CAPS2
SLC50A1
ZBTB20
ARHGAP12
NUAK2
SEBOX
ATP13A1
NFKBIB
DENND1A
RNF113B
CLPX
ATXN7L3
UBN2
DOCK6
PALM3
POLDIP3
SAXO1
RRAGA
BAIAP2
AP3S2
PPID
MBIP
UCK2
MTRNR2L9
BTBD16
SP2
ISCA1
PRX
GM2A
NR2E1
NQO1
HCAR3
NDRG1
NR2F1
SHBG
SAT2
KATNBL1
USP36
TRAF4
PPP1R37
ACADM
TYSND1
CD200R1L
PLIN3
AQP3
RNF169
MKNK2
TSHZ1
FAM169A
AP1M1
NUP107
FBXW5
C8G
BOLA1
NT5DC1
ADM
LAMA3
SPAG7
PLEKHB2
NOP9
DHRS1
GLI4
FADS2
BCL2L13
ATP6V1E1
FADS1
MAP1LC3C
NCOA4
ZNF230
MEF2C
OTOP3
FAM43A
SLC28A1
KIFC3
CFLAR
AMT
MYBL2
NEDD4
ITGA6
APOBEC3B
ZNF362
FZD5
ZNF747
ZNF207
LMNA
C1orf105
UQCRC2
CA7
EVA1B
TMEM260
RB1CC1
PRSS12
NEIL1
IFNGR1
LTBP3
JOSD1
GTPBP1
ATP8A1
PUS10
PEX13
SECISBP2
MLLT6
SLC7A8
RNF212B
VEZF1
HBEGF
GUCD1
COL13A1
SEPTIN9
SENP1
PFKM
ID3
NIP7
COG8
CCNL1
PPME1
C2CD3
MFSD10
CLU
C6orf47
GAPDH
GPANK1
CSNK2B
LGALS1
ESCO2
FAM184A
SNRPA
C19orf54
MRGPRF
ZSWIM8
CHCHD1
HEPH
ST3GAL4
LDHA
RUVBL1
EEFSEC
CCDC93
CCDC71
KIAA0754
KLHDC8B
PLGLB2
PLGLB1
ANKRD6
CEP85
BCL2L15
ATAD1
SHF
AMDHD2
CRYAB
H4C12
C11orf52
USP3
TMC1
ATP6V0C
ST6GALNAC4
SLC35F3
SGPP1
CCDC88B
PPP5D1
CALM3
NUMB
ZSWIM3
ACOT8