ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX361882 | LoVo
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◣ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

TMEM177
ECHS1
PPIL2
ORC2
SLC35A3
KIF21A
ATXN7L1
HNF1A
ERBB3
SLC7A7
MIA2
GSTK1
GPR35
OR9Q2
RAMP1
ETFA
AFF1
LURAP1L
TACR2
SELENOP
CCDC90B
INAVA
PRKCSH
CCDC151
CDC14B
ZFAND3
TMEM45B
CLIP2
PRSS3
HMGCS1
LTB4R
LTB4R2
CIDEB
IST1
RASA4
YEATS4
SKIV2L
NELFE
MYRF
NADK2
STK24
MAMDC2
SHISA5
DNAJC22
DENND5B
KNL1
PHACTR4
PCNX3
MAP3K11
GCHFR
RBKS
BABAM2
DNAJC25-GNG10
DNAJC25
SERPINB1
TSPAN3
LBX2
VIL1
PCGF1
SMAGP
AQP11
MYL12B
MYO1A
NPTN
DYRK2
ZNF384
TATDN3
NSL1
BIRC2
RASA4B
RAB17
LOC100129484
PAK4
RAB43
SPPL2B
LSM7
MAN2C1
GAB2
TTC31
CCDC142
C9orf64
CNNM3
ADAP1
SPON1
ACY1
MARK2
LTV1
MNAT1
LAMTOR5
GGT1
LRRC1
MAGI3
OSBP
ACY3
PHETA1
TCAF1
BNIP5
KIAA0100
CLRN3
ZNF564
PTPA
CRAT
TNIP2
METTL7B
MMACHC
CCDC163
TYMP
SCO2
TMCO1
COL23A1
RAD54L
ADAMTS6
TNS3
SLCO2B1
CPPED1
REG4
GOLPH3
DOCK6
CACNB2
WDR97
MAF1
ATXN2
POLRMT
BAIAP2L2
CDK5RAP3
SPATA25
NEURL2
CTSA
RAB37
AGMAT
CYB5R3
KLHDC8A
ARMH3
KDM6B
LRIG3
TECR
DNAJB1
TPCN1
COBL
ZNF827
HOXA3
LINS1
ASB7
ARHGAP27
C1GALT1
PAAF1
COA4
B4GAT1
SEC16B
WDFY2
HEPH
C1QTNF1
GIPC2
FNIP1
LTBP1
METTL8
DCAF17
BTNL8
EPS8L3
PAK1
SLC17A5
PCDH1
MAP4K5
ATL1
DMXL2
LARP1
ASAP2
CLDN7
PTGDR2
RUNX1
C1orf210
CRYBG2
CDC34
ZNF219
TMEM253
PLEKHG5
THBS4
MTX3
SUPT7L
SLC4A1AP
NCR3LG1
KRTAP5-7
MBNL2
BCL3
LSM5
PERP
C3orf85
ABLIM1
ZNF408
ARHGAP1
COQ5
MPV17L2
LRP6
XPR1
PPIP5K1
CKMT1B
CDK3
TNFSF15
ADD3
GRTP1
PEX16
LARGE2
TFDP2
NUMB
C2orf88
C1orf174
NUDCD1
TANK
HNF4A
KDM3A
TSEN2
ISCA1
TRIM15
TRIM10
PPP4C
PDZK1IP1
LMO7
UBC
ABCB1
SOS1
CDKN2AIP
XPC
LSM3
TSPAN14
PROCR
HSD17B11
CLDN4
TP53I3
MYO7B
RAPGEF1
PDGFB
NDUFA6
PTK2B
TRIM35
FOXJ3
CAMK2G
HSPE1-MOB4
HSPE1
HSPD1
L3HYPDH
JKAMP
NR1D1
SRSF11
LRRC40
SPATS2L
TMIGD1
CENPS-CORT
CENPS
SENP1
PFKM
SASH1
RHOC
IL20RB
RSBN1L
CTXN3
PEX11G
SPATA18
UHRF1BP1L
DTX2
MTRNR2L2
MSH3
DHFR
PINK1
KLHDC2
MLEC
TMEM89
RPL35
ARPC5L
TCF12
FGFR3
IGSF23
CD2BP2
IGF2BP3
ANKRD40CL
PTBP1
PHF7
BAP1
EPS8
IGF2BP2
CALCOCO1
KRT15
SCARB1
PKP2
TPRG1L
MGST2
PICALM
ZFP36
PLEKHG2
CHST13
DGKZ
VTA1
NMBR
IDH1
GNAL
SDHAF1
TMEM54
MIIP
TNPO3
AJUBA
ZNF764
SMYD5
HGD
GAL3ST1
MRPL40
HIRA
SEMA3C
PDXP
ANK3
ARL14
CALM2
PKP4
CCDC148
PRUNE1
MINDY1
HADHB
HADHA
OPA3
CSNK1A1
TNRC18
ZDHHC3
EXOSC7
PSMA5
TMBIM1
TTI1
RPRD1B
TIA1
HAUS4
SPRY2
TPD52
ZNF687
NAPRT
TM4SF5
DOLPP1
AHCY
CDR2
NAPEPLD
TMPRSS4
PGF
ABR
PFDN5
MYG1
ASB4
WT1
SLC16A14
TES
PIWIL1
MEGF9
MMADHC
ENGASE
TSHZ1
NDUFS1
EEF1B2
RBIS
FRG2
SFRP4
EPDR1
C4BPB
RSPRY1
PSME3IP1
VANGL1
DTX4
TCAF2
PPP5D1
CALM3
PEPD
TMEM150A
PEF1
PROS1
PDE8A
FEM1A
SECISBP2
ZNF775
USF3
MGAT5
GTF2IRD2B
POLD4
TINAGL1
SDSL
URGCP-MRPS24
URGCP
ATP5IF1
RIPK4
SEC23A
TJP3
ZNF214
NLRP14
OCIAD2
NHSL1
CRPPA
CSTF1
AURKA
UBA5
ACAD11
AMN
CCDC59
NPNT
JPH2
SPTBN2
YAE1
SEPSECS
AK3
SYNGR4
MPP5
PRKCD
PITX3
GBF1
RRN3
OR10H5
PITPNM3
EIF2AK2
CARHSP1
GDPGP1
CIB1
PPM1D
MLST8
BRICD5
TLE3
PTP4A1
GRB7
MDM2
FITM2
HDAC7
NADK
VPS41
SMPDL3A
CLASP1
SLC35D1
SDC1
RAD51AP1
C12orf4
DOCK5
GLI4
CLIC5
CCND2
CDHR2
CPNE8
SUCLA2
CEP43
RBM33
SSTR1
PLAAT3
FOXL3
SEL1L3
ERF
ZNF747
BCL9L
ODC1
RPS26
NEK2
MUC13
PYM1
DGKA
MYD88
ACAA1
PYGL
NFIB
CCDC42
ECM2
PCYT2
TNFAIP8L1
CKMT1A
HSD17B2
EFNA1
CCDC93
SUOX
LRP2
NCOA2
RAPGEF2
SLC11A2
C15orf40
SIN3A
GUCA2A
CCNI
PMM1
SOX30
C5orf52
TOMM5
GABPB1
ZC3H12D
ZFYVE27
TMEM181
STARD4
RIN3
KATNB1
GUCY2C
SNRNP35
LGALS4
UBE3B
PDE5A
AMACR
ACADM
AXL
DUSP18
LAMA3
INSIG2
RHEX
UBE2R2
MRPL24
GAS6
FAM102A
ZFAND6
GSAP
GPX4
PRR3
GNL1
TRIM2
C1orf74
TARBP2
MAP3K12
C19orf33
SELENON
SLC7A5
DHRS3
GSTM4
RNF43
WFIKKN1
RSAD1
METTL26
PXN
RAB5A
EFHB
KDSR
HOXA7
HOXA6
PHF12
KDELR2
NR1H3
ACP2
TMEM63A
CDX1
TMIGD3
BRI3BP
ADORA3
ZNF232
USP6
IFNGR1
UGT1A1
LRIG2
GGCX
KIAA1549L
DDC
NIPAL1
CNGA1
DDAH1
ATF4
TSC22D4
NYAP1
MGAT1
FOXQ1
LEKR1
LIPK
CHMP4B
PYROXD1
EMX1
LEXM
ZNF195
ABCC6
CPLX2
CEACAM16
PUSL1
ACAP3
OVOL1
CGN
TRIM31
SEC22B
PRKCA
APOL4
ITPRID2
VILL
JMJD1C
SLC25A16
RPL36AL
MGAT2
NT5DC1
TIMP4
CERKL
VAC14
IQGAP3
ABCB4
SH3BGRL3
SH2D3A
CEP170B
RAB24
PRELID1
LASP1
OTOG
ZSWIM3
ACOT8
USH1C
EFNA2
STX18
SPO11
NRP1
MACC1
SLC20A1
LOC102723360
TNFSF4
BCL7B
ZNF789
ITGB3BP
EFCAB7
RARRES1
PANK1
RARA
TLCD2
PPFIBP2
CDC14A
HLA-A
GBA
PPP1R27
MCRIP1
ZNF57
CCDC71
CYCS
RELL1
KLHDC8B
RASSF9
CTTNBP2NL
MS4A8
ZBTB48
GAB1
S100A16
PDE11A
LZTS3
ABAT
HRH1
PRDM10
STARD7
TOB2
CDC6
SAXO2
EFL1
LSM14A
MYO1E
UAP1
DECR2
NME4
B4GALT4
EML6
PALB2
DCTN5
DENND2B
AP1M1
XYLB
UBA6
RREB1
SNX7
C6orf132
EXD2
SART3
ISCU
CLCN3
LSM2
SUSD1
TNFRSF14
CTSO
KIF21B
ALDH3B1
ZBED4
RFLNA
HABP2
SYT17
ZZEF1
CYB5D2
SH3D19
PPIP5K2
GIN1
B3GNT3
HDGF
OCIAD1
OSGIN1
TACC1
SPATA5
NUDT6
CORO1C
OTULIN
NDRG1
ETFDH
C4orf46
OBI1
REXO4
ADAMTS13
AKAP1
CRY2
UFL1
FRMD3
SFXN3
PDZD7
COL13A1
SRC
SLC22A23
RAB6D
NRBF2
TYMSOS
TYMS
NEIL1
GPR68
HAGH
FAHD1
CD177
CYP2C8
FBXO22
XAGE1B
XAGE1A
H4C9
MVP
IRF2BPL
RDH5
BLOC1S1
TEX9
RFX7
BAZ1B
SLC25A45
FRMD8
MAP1LC3B2
KCNK10
STAT6
MTF2
OSBPL3
SPAAR
PSPN
ALKBH7
SMG7
C1orf105
PXMP2
POLE
TAX1BP1
CNBP
UGDH
ATP5MC3
ESRRA
RSPH1
SLC24A1
INTS14
ODF3B
MPRIP
SMARCD1
KRT8
NUB1
NMNAT1
LZIC
OR6B1
RRP9
PARP3
MAT2A
MTCH2
TMEM140
SLC41A2
ANTXR2
NAB2
CA9
ARHGEF39
PMVK
CDKN1A
GAMT
RER1
MORN1
SLC38A10
MRPS30
H4C7
H4C6
NBL1
CREBRF
CTNNB1
HMOX1
RAD18
CBWD5
CBWD3
POM121
SCAF4
ZC3H12A
ASB8
CYP1A1
WNT5B
SNRPA
C19orf54
DIP2C-AS1
PARP4
RIN2
RAB40C
LHB
PANK2
SAMD3
PLCB3
PRDM8
SH3BGRL2
MIA3
KIAA1522
LDAH
USP2
WNK4
KDM2A
PGPEP1
PCBP1
RGL1
ARPC5
SERF2
ELL3
TAF9
RAD17
AK6
USP8
PHGR1
SLC9A3R1
CREB3L3
ZNF362
PJA2
GAL3ST2
MTUS1
HES1
LENG8
MRPL48
RAB5IF
ASL
RCOR2
TOE1
MUTYH
GANAB
SHFL
GATAD2A
TBC1D30
TEX2
GNS
MTLN
SELENOT
IL1R1
SLC22A2
DONSON
TREX1
SOCS5
MEP1A
PEX3
ADAT2
CRYAA
CRYAA2
CXCL2
EVPL
FAM200B
RIC8B
TPM1
TRAF4
ANXA2
FAM185A
NLRP6
ATP5MF-PTCD1
ATP5MF
BTN3A2
TBXAS1
HIPK2
KHNYN
CBLN3
CYP4F3
SMIM14
BAZ2A
DEPTOR
BORCS7
TTC38
PKDREJ
PRR15L
INF2
CD99
ZBED1
DHRSX
NT5C3A
GOLGA4
ELK4
SMARCE1
CORO1A
NUAK2
SCAF11
KANK1
SLC22A3
WDFY3
LHX4
COG7
GPRC5A
AGPAT3
SEMA3B
MIEF1
HNRNPF
MIOX
ADM2
B2M
AGBL4
KIF1C
INCA1
POLDIP3
SLC16A4
CLDN3
MTA1
CRYBG1
RPEL1
TGFA
SCRT2
EXOC1
TREH
ACOX2
ADGRG1
WDPCP
MDH1
NAB1
VDR
PEX10
NOTCH2NLC
ENDOD1
PRR13
THNSL1
SCT
CDHR5
GAS2L3
GET1
HDHD5
TLNRD1
SURF4
VPS50
HEPACAM2
TDP2
ACOT13
TOLLIP
HLA-C
PIGO
GCLC
MTFR1
SULT2B1
CDK18
CBY3
ZNF516
KCTD7
TGM3
GALM
KMT2D
PIGR
CTDSPL2
DOK4
PRR5
WDR90
TUBB4B
SERINC5
TECPR1
PDZD9
ATP6V1FNB
ATP6V1F
TAOK3
SUDS3
GALK1
HNRNPD
LRP4
MRPL4
MICAL2
PRRC1
RALA
CDH11
ANXA11
SPPL3
VPS28
HDHD3
BSDC1
GGNBP2
CACHD1
CTNNBIP1
SMAD3
WDR81
SH3BP5L
PLEKHG1
PLA2G2A
CBLC
IL18R1
TRAF7
IRF2
LGALS3
KBTBD8
NR1I2
HTR1F
CCDC107
PAX2
SEPTIN11
ANKS4B
HMGA2
ABTB2
IQCN
PKN2
P2RY2
FTCDNL1
SIAH2
CCDC146
LSM4
ZNF3
FBXO31
DDX58
ARHGEF18
FCRL2
LGALS2
MLXIPL
PFN3
F2R
IL32
DDX19B
TRIP12
FBXO36
MTRNR2L8