ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748433 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◣ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

SCRT2
MIA2
ACSL5
CRYBG2
SKIV2L
NELFE
CCDC107
LENG8
SIAH2
SEPTIN4
URGCP-MRPS24
URGCP
EPS8L2
DEAF1
NR1I3
SPAAR
HRCT1
LTB4R
LTB4R2
CIDEB
ATXN7L1
CDHR2
PHF12
ADAMTS6
KDM6B
CYP17A1
MTRNR2L8
AP1AR
NDUFS1
EEF1B2
PLXNB2
CSTF1
AURKA
EXOC1
SFRP5
PCNX3
MAP3K11
SLC20A1
SEC13
ABCC3
C19orf33
B3GNT3
LASP1
SPON1
C11orf86
CAMK2G
SNTB2
DNAJC25-GNG10
DNAJC25
NCS1
KIAA2013
ROCK2
TIGD3
ALDH2
ERICH3
RAB17
RCOR1
SCARB1
CFL1
CLCF1
SLC9A3R1
HDGF
ACY1
NEK2
SLC27A5
FUT5
PPP1R12B
PTP4A1
ATP5F1D
MIDN
INPP5J
INAVA
RIPK4
SERINC2
C2CD2L
RCOR2
S100A16
CHST11
CREB3L3
RAD50
RGS3
VGLL4
ZC3H12D
MEAK7
IST1
CSNK1A1
ARHGAP27
GJB1
GNAL
IRX4
CTSE
GPX4
LOC100509620
PRUNE1
MINDY1
SLC41A2
SHTN1
LBX2
MTRNR2L2
MSH3
DHFR
RAPGEF1
MYD88
ACAA1
PCGF1
SMIM29
SH3D19
MPI
PAX2
NGRN
ENDOD1
EDEM1
BLVRA
PEMT
CD86
C10orf105
ZFP36
PLEKHG2
CCDC90B
C19orf12
TLCD4-RWDD3
TLCD4
PLA2G2E
SPTBN4
BLVRB
MTMR11
C1QTNF1
PEX11G
FHL2
UBTF
MYRF
C1orf174
SH3D21
ZNF764
PLAAT3
PRKCD
SCAF11
ANXA11
SPG7
RTL10
GNB1L
STAP2
MPND
ROMO1
NFS1
SFXN3
PDZD7
USP37
CNOT9
RBKS
BABAM2
GAB1
KIAA1549L
MIIP
TJP3
TTC31
TNFRSF10B
INTS4
TRIM55
ANKRD66
ITGA3
PRMT2
SELENOP
PTPRF
ADRA1B
CA9
ARHGEF39
GUCA2A
PIM3
KNL1
TDP2
ACOT13
PGLYRP2
GNB1
ERBB3
TINAGL1
ACAA2
DCLK1
CERS2
CCDC142
SEC23A
KRTAP5-7
OXCT2
YARS1
S100PBP
APOA1
ARNT
AFF1
SPATA18
ERCC6L
NR6A1
USP2
KDM4B
PLK2
PTS
CLRN3
NR1D1
MAP4K5
ATL1
ATG16L1
UBE2R2
TCTEX1D4
BTBD19
INTS9
HMBOX1
MTFMT
POLD4
DNAJC22
PEPD
ERBB2
PRKCSH
CCDC151
C10orf90
RASSF1
SERPINB1
CDC14B
PCBP1
TOB2
ZFAND3
PTDSS2
ANO9
RFFL
CITED2
EEPD1
SECTM1
KPNA7
PRDM10
PRR3
GNL1
NOSTRIN
C11orf24
CCL20
SMAD3
MIA3
KIF4B
CEP152
CBY3
CPLX2
IDH1
PPIP5K2
GIN1
RBP2
BRCA1
TECTB
SF1
DKK1
LGALS1
CORO1C
CENPVL2
CENPVL1
CTSO
AWAT1
C2orf88
MBD3
USH1G
C2CD2
DHRS3
PCYT1A
GSTM5
ABHD12B
ALDH3B1
RGPD2
RGPD1
SLC19A3
GPR137
ELL
ARHGDIA
RNF217
MSH5
CLIC1
PPP1R37
PDPK1
TMCO1
PHOSPHO1
CEMP1
RBIS
SLC7A5
MMACHC
CCDC163
HERC5
TOGARAM1
KLHL28
ZNF696
CDKN1A
SMARCD2
MVP
MBLAC1
TNFRSF1A
LSM1
BAG4
TMEM82
HCAR3
PABPN1
GLRX
MYOG
EIF4E
ABLIM1
TAB2
NRCAM
SPTBN1
RARA
SFT2D3
DENND1B
RPS3A
TLN2
SH3BGRL2
MLLT10
SLC39A6
DOT1L
ARPIN-AP3S2
ARPIN
TEAD4
SYT12
NAE1
PLIN1
IGF2BP3
KMT5A
COPS4
LRP1
GAL3ST1
ABCG2
GIP
RCAN1
KLF6
MSLN
HOXA3
METTL27
TMEM171
PLAA
IFT74
DOCK5
POLRMT
ACOX2
METTL7B
TYSND1
KLRC2
IQCN
PDXP
IL20RB
SLC38A10
PDGFRL
SHPK
CTNS
PCGF5
OCIAD2
TRMT11
AHSP
DKK4
CD2BP2
SQSTM1
MGAT4B
PPP1R27
MCRIP1
GADD45A
FCHO2
DENND1A
CALML4
FBXO46
AMN1
BIRC2
RUNDC3A
YAP1
CPHXL
PHETA1
TMEM183A
SAXO1
RRAGA
FASTKD1
MAP2K3
SF3A2
PLEKHJ1
CDC6
NQO2
NFKBIB
SIRT2
TMEM214
LIPK
SGO1
SPAG8
HINT2
TTI2
HSD17B4
MBNL2
JUND
IRAK2
WDR81
UBA5
C1QTNF6
LOC100129484
DENND5B
TRIM2
SLF1
KIAA0825
IQGAP2
GAPDH
SH2D5
TES
FXR1
RASSF2
PNPLA1
PANK1
GPR171
NFIB
UNK
H3-3B
FAM3C
IZUMO3
PNOC
AHCY
TACR2
CIDEC
PIKFYVE
ASB2
PHACTR4
PLCXD2
FAM110C
DHRS7B
ROM1
EML3
ADI1
VTN
SARM1
UBA6
PMVK
COPZ1
SDC1
GOLGA4
EREG
CAPN2
PACSIN2
BEST3
NCOA4
CLASP1
IRAG1
DYRK1A
MTRNR2L1
CCND2
ARHGAP32
IFRD1
TAGLN2
STX18
NFE2L1
ZMYND8
RPL23A
RAB34
TRAPPC4
RPS25
LY75-CD302
LY75
MLF2
PYGL
PITPNM1
LAMP3
ABHD2
SNRPF
PYCARD
TRIOBP
CRK
WDR27
C6orf120
PPID
PPP1CC
PRXL2A
SEC16B
MLPH
MRPS11
MRPL46
PJA2
PFN1
ENO3
RNF167
SEH1L
TMOD1
CERS4
COQ5
SLC25A24
LAMB2
IL32
OCIAD1
ZSWIM7
TTC19
SHISA5
CARD19
MFAP4
MXD3
FBXW5
C8G
GNPDA1
SENP6
STK24
PMEPA1
TAOK3
SUDS3
MRPS28
KRT86
NECTIN1
CIBAR2
LHB
KCNQ4
BLCAP
SPDYE14
SPDYE10P
TMEM120A
CREBRF
PLXDC1
TKFC
DDB1
RRAGD
ZNF367
PPIH
HASPIN
SESTD1
SOS1
ZNF207
PYY
NAGS
WDR77
ATP5PB
PRAP1
TUBAL3
CHCHD2
RAD18
PRDX6
SEMA3B
CRPPA
AQP1
KRT18
PRR7
MRGPRF
TBP
PSMB1
RPL27
MAPK8
SH3BP5L
PLEKHG3
IRF2BP2
TDRD1
CCDC186
RPL10L
DAPP1
NLRP3
SHFL
NAV2
BEGAIN
IQSEC2
ATXN7L3
LYPD2
SHF
KREMEN2
PAQR4
ALDH3A1
KRT19
GLO1
SHC2
TRIM29
BORCS7
RHOC
SPINT2
SMIM19
SLC20A2
MTMR4
IBTK
TTC36
TMEM25
FAM185A
ADM
SLC25A28
P2RY4
FLVCR2
RPP25L
GUCA2B
DENND2B
TMC1
SRSF4
CEBPG
RNF113B
TMEM169
PECR
ADGRG1
ALDH3A2
ACADM
CA7
SERINC5
STK11IP
TMEM120B
CD200R1L
GDPD1
PPM1D
COMT
SMYD5
GATAD1
EPS8L3
PGAP3
SPTBN2
GCLC
IRF2BPL
ASAP2
STN1
C9orf85
ABHD17B
ANXA2
NAT2
UTP14A
RABGGTB
SLC2A9
SELENOI
ADGRF3
PMS2
AIMP2
SLC26A6
GUCD1
TBC1D22A
UBC
ARHGAP29
ANGPTL4
NUP107
C1orf105
TIRAP
ARTN
GPD2
ZC3H10
RPL41
SLC16A4
PPP1R2
ARHGAP12
GPT
PPP2R5B
CNOT6
INF2
KDM2A
PPP1R3G
GLTP
IGSF23
ZNF225
DBP
SF3B5
POLDIP3
ZP3
FGF23
RAB37
SMAGP
PHF5A
ACO2
DAD1
HPCAL1
POT1
CYP26B1
AQP3
TMEM121B
AMT
ARSB
ARSG
MBIP
ARPP19
RENBP
MAFG
PRKAR1A
PRX
SLC7A8
RNF212B
KLK6
CMPK1
APOBEC1
SLC25A5
HSPA5
BCL2L13
ATP6V1E1
MINDY4B
DIS3L
HKDC1
ERICH4
DMAC2
KRT7
CLU
PPP1R9B
PTPN23
RASAL3
ENTPD7
SNRPA
C19orf54
TMEM254
PNPLA2
POLR2H
CLCN2
MRPS30
STARD3
BCL9L
VPS54
H1-0
GCAT
PWP1
NEDD4L
RSPH3
HMOX1
SLC36A1
MXRA7
FIBP
CCDC85B
MYBPH
SRSF5
SRSF11
LRRC40
KDM3A
FAM160A2
KCTD14
MRPS7
GGA3
ATXN2
APOL4
NFXL1
TOMM70
LNP1
ADGRB1
ALDH4A1
FLVCR1
IL1R1
FAM102A
PTGR2
HNRNPH1
JOSD1
GTPBP1
CTTNBP2NL
ARL6IP5
ZNF565
ZNF146
ELFN2
NPB
ETV4
CDC25A
LINS1
ASB7
BCAR3
EMP1
ATP5MF-PTCD1
ATP5MF
CEP128
B2M
SLC2A14
FAM20A
GPR84
PDE11A
CDC42BPA
U2SURP
ZMAT1
SLC6A9
CALCB
PCMTD1
ZNF564
KIF16B
PRSS12
ZNF512B
RASSF5
BAZ1B
SMCHD1
PPP2R5C
TRIM15
TRIM10
DGKD
CORO2A
RAB30
C8orf58
MED20
BYSL
LOXHD1
BPHL
TRIP10
GPR108
NOP9
DHRS1
RAB3D
TMEM205
CCDC159
RTN4
FHDC1
TBX1
PTTG1IP
KRT8
GRAMD4
AP3S2
LRP5
ORAI1
TRIM14
SLC26A1
NEK6
SLC38A3
SSTR5
G6PC2
CLCNKB
HOXA10
VMP1
PTRH2
SRGAP1
AP1M1
KIF21B
CEP135
PPP5D1
CALM3
ETFA
FZD5
DLX2
GNA12
ARMC12
ZFP36L2
ANO1
KIFC3
BAIAP2
PLGLB2
PLGLB1
SP2
MYBL2
DIDO1
PRMT1
PSMA5
PHF14
IFI35
ARHGAP45
RDH5
BLOC1S1
LSM5
INVS
ERP44
MIGA1
MTHFD1L
OGA
TOMM20
EHD2
PTK7
DOLPP1
RNF5
AGPAT1
USP16
MEF2C
GOLGA8B
ACTG2
CYB5R3
EFNA1
TLN1
CREB3
HDHD5
NPC2
ISCA2
TOMM40
GSDMD
AMACR
CLNS1A
SESN1
CEP57L1
SH3RF2
NQO1
VTA1
NMBR
BAAT
SAXO2
EFL1
NCSTN
COPA
ID3
PLIN3
TBCA
EFR3A
MMADHC
NUDCD1
HPGDS
NMT1
DCAKD
TUBG2
LOC730098
CCL27
NSD2
SPRED3
GGN
GBGT1
RFT1
PINK1
VAMP5
RAB43
PDGFB
SERPINA1
RPL35
ARPC5L
WDR38
PET117
KAT14
NRL
DCAF11
MGST2
EGLN1
DCLRE1C
MTFR2
MEIG1
XAGE5
NIBAN2
ASAH1
RNF121
LOC100133315
RBM8A
ISCA1
NR2E1
RNPEP
GPCPD1
FGGY
GRAMD1C
PERP
NAP1L4
MTA1
ZNF708
ASF1B
CLDN4
ZBTB7B
LRIG2
IFNAR2
C6orf47
GPANK1
CSNK2B
BHLHA15
ADGRA3
KLRC3
FDXACB1
C11orf1
RTKN
UCMA
TMEM63A
ZDHHC8
IDNK
CISD3
LEFTY1
OGFOD2
MAN2C1
ENTPD2
RIPK3
NPTN
TTI1
RPRD1B
DOCK6
LPP
HDHD3
MAP1LC3B2
PDE4C
PLAU
OAF
ATF3
RNF113A
LRRC1
SLC50A1
PLIN4
ADPRHL1
AURKB
SFR1
CLPP
KCNMA1
SEBOX
CASTOR2
SENP1
PFKM
MAP3K14
CLDN14
TSNARE1
ATP8A1
ACY3
TPT1
CNIH3
PPP1R15B
TXN
APOA2
TOMM40L
TNFRSF10C
ELK4
GATAD2A
EML6
SLC35A2
VPS37D
TMEM94
XBP1
PACS1
NCR3LG1
UCK2
LEKR1
MYC
PSPN
ALKBH7
ST3GAL6
TTYH3
GPR107
TACC2
SBSN
C3orf52
TMEM270
KIF21A
IER5L
IL13RA1
PC
ADAR
SEPTIN9
CMIP
ZNF230
ABL2
LDHA
RPLP2
PIDD1
LURAP1L