ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX360584 | GP5d
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◣ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

ORC2
LTB4R
LTB4R2
CIDEB
RAB17
RGPD2
RGPD1
GPR35
MIA2
ATXN7L1
TACR2
PPIL2
SHISA5
TMEM177
ECHS1
C9orf64
MTRNR2L8
LBX2
PCGF1
HNF1A
ACY3
PCNX3
MAP3K11
GNAL
SLC35A3
EPN1
LOC100129484
KIF21A
AFF1
GTPBP6
ETFA
SKIV2L
NELFE
SUCLA2
LRRC1
SELENOP
EMILIN2
PAK4
FGFR3
LAMTOR5
SLCO2B1
KLHDC8A
DYRK2
DOCK6
TNFSF15
RBKS
BABAM2
HMGCS1
RAMP1
MAMDC2
PAAF1
COA4
WT1
GET1
ECE1
GAL3ST2
NUMB
GPX4
GPR137
TMEM54
ASAP2
CDC14B
CCDC90B
MGST2
VIL1
GRTP1
MTRNR2L2
MSH3
DHFR
TRAF7
BIRC2
CPPED1
CLIP2
GGT1
MTRNR2L1
SPATS2L
CARHSP1
EPS8L3
IST1
PRKCSH
CCDC151
ARL14
MBNL2
SEL1L3
ERVW-1
INAVA
SDSL
PKP4
CCDC148
DUSP18
ABLIM1
CPLX2
MYL12B
RER1
MORN1
TATDN3
NSL1
ACY1
SERPINB1
INF2
KNL1
ANK3
C1QTNF1
GOLPH3
PYDC1
DNAJC22
REG4
IL20RB
AQP11
LTBP1
GRM4
ZNF827
SPPL2B
LSM7
HEPH
SCAF11
GAB2
SEC23A
SEPSECS
NRBF2
FEM1A
PDGFB
OSBP
ZNF567
WDFY2
VCPIP1
C8orf44-SGK3
KLHDC2
CRY2
POLRMT
AP1AR
ARHGEF10L
DEGS2
TNFRSF10B
ARHGAP27
LURAP1L
CACNB2
PRSS3
GSTK1
TMBIM1
MMADHC
TECPR1
TYMP
SCO2
NADK2
JMJD1C
MYO1A
ZNF789
OSER1
TSPAN3
COL23A1
STK24
SPON1
DENND2B
WDFY3
CDKN2AIP
SLC7A7
DHRS3
ZFYVE27
RIPK4
ABCC6
DENND5B
ZNF214
NLRP14
CDHR2
PEMT
AHCY
DTX2
HEXB
C1orf74
METTL7B
SOS1
PHACTR4
TIE1
MVP
CYP4F3
CDX1
MUC13
TREH
PPP4C
C1orf174
USP2
CAMK2G
PIWIL1
ZNF764
TP53I3
SH3BGRL2
NPTN
TM4SF5
RPL35
ARPC5L
VTA1
NMBR
TNIP2
C2orf88
RUNX1
TNRC18
CCDC93
OCIAD2
KIF21B
ATAT1
HRH1
HADHB
HADHA
PDE11A
MRPL40
HIRA
IGSF5
CRYBG2
LIF
GPBAR1
WDR97
MAF1
AAMP
HGD
KDM6B
ACOX2
WASF2
NCOA4
LASP1
PPP5D1
CALM3
SLC7A5
ZNF219
ZC3H12D
TPCN1
RIN3
SPAAR
CYB5R3
ALAS1
MLXIPL
RAB43
SCGB1C2
BCL9L
TMEM45B
RHOC
AHCYL2
PTPRF
CA9
ARHGEF39
SMAGP
ENTPD2
ZFAND3
PITX3
GBF1
VPS41
NHSL1
ZSCAN22
TARBP2
MAP3K12
ALDH3A2
C1orf210
PERP
TTC31
TJP3
CCDC142
LSM14A
DECR2
NME4
TANK
DNAJC25-GNG10
DNAJC25
SPO11
ALPI
CRYAA
CRYAA2
GUCA2A
SDC1
TSPAN14
SCT
CDHR5
WDR7
ZFP36
PLEKHG2
ZNF564
MIOX
ADM2
GRHL3
C15orf40
ZNF232
USP6
PGF
AGPAT3
ADD3
CDK3
NR0B2
S100A16
ITGA3
PCGF3
OCIAD1
NCOA2
PICALM
NR1D1
SLC38A10
WDPCP
MDH1
PCYT2
CRYBG1
PTK2B
TRIM35
TREX1
CNNM3
PABPN1
PDZK1IP1
OPA3
TEP1
RPL36AL
MGAT2
EFNA1
DTX4
TBXAS1
HIPK2
MPV17L2
ESRRA
SIN3A
MGAT1
GLYCTK
BNIP5
STX18
IL18R1
COBL
SPATA25
NEURL2
CTSA
PHETA1
NIBAN2
ZBTB40
PHF12
CSTF1
AURKA
ERBB3
PTP4A1
HAAO
CERS2
SLC9A3R1
URGCP-MRPS24
URGCP
VTN
SARM1
NEK2
TMEM169
PECR
MYRF
SEBOX
SEC13
PDXP
CCDC107
PINK1
RAPGEF1
PANK1
SCRT2
NCS1
NR1I3
MACC1
GPR171
NDUFS1
EEF1B2
ZBTB48
ERBB2
ACSL5
SMPDL3A
EPS8L2
DEAF1
SLC20A1
CREB3L3
LENG8
NRL
DCAF11
USP18
LY75-CD302
LY75
F10
RAB37
AP1M1
GCLC
SH3D19
PLEKHG6
AGMAT
SLC19A3
FUT5
IDH1
SMG5
GLMP
CCND2
HNMT
B4GAT1
IGSF23
EDEM1
AJUBA
IQANK1
FAM83H
PRUNE1
NQO2
MINDY1
VAMP5
GUCD1
RHEX
DOCK5
NDUFA6
PRKCD
TDP2
ACOT13
CYP17A1
PPIP5K2
GIN1
CDR2
SIAH2
AHSG
SRSF11
LRRC40
POLD4
WEE1
MYD88
ACAA1
PUS10
PEX13
COPS4
MMACHC
CCDC163
FBXO31
GDI2
GAB1
SFXN3
PDZD7
FCHO2
SDCBP2
IGF2BP3
RABGGTB
PSMA5
DIDO1
TIGD3
PDF
GTF2I
EXOC1
TRIM15
TRIM10
SPATA2
GLRX
NQO1
KIAA2013
APOB
DBP
XYLB
RPS3A
SCARB1
APOA1
SEPTIN4
ANKS4B
KIF1C
INCA1
AFP
BORCS7
SLC45A4
BCAR1
C19orf33
TBC1D22A
TK1
BLOC1S5
FYB2
CORO1C
SNRPA
C19orf54
LARP1
TCIRG1
KRTAP5-7
MRPL2
KLC4
GSDMD
RAB5IF
CTDSP1
MAN2C1
ATP7B
RGS3
PLXNB2
IL32
SMARCD1
PPP1R27
MCRIP1
IQGAP2
GJB1
MAN1A1
PTDSS2
ANO9
CBY3
PLEKHB2
FASTKD1
SMAD3
C11orf24
ADAP1
CPNE7
APOC3
IFNGR1
LRP1
DOK4
NEK4
ITIH1
B3GNT3
WNK4
EPHX2
KDELR2
OXCT2
NID1
ERICH3
TKFC
DDB1
PRAP1
ZBED9
SRMS
PSPN
GNG4
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
CLIC1
F7
GAL3ST1
UBR4
PALM3
PEPD
TRIM47
PRDM10
PTK7
HINT1
VWCE
SPG7
LTV1
SPDYE14
SPDYE10P
LIPK
PCGF5
SEPTIN9
IL1R1
H4C3
H1-6
CD2BP2
PDPK1
HDGF
PROCR
RAD50
LSM1
BAG4
ABCD3
SMIM19
SLC20A2
PRSS8
HRCT1
IRF2BPL
CFB
GIP
UCKL1
RCAN1
ATP5F1D
AGT
PRMT1
DNMT3A
TRIM14
TECTB
CA5A
WDR81
MBL2
QPRT
C1GALT1
MIDN
RUVBL1
EEFSEC
CLASP1
TRAF4
ALG11
NCR3LG1
RASA4
TCAF1
PRXL2A
PLA2G4C
EGLN1
ZFAND2A
ATXN7
ENDOD1
ZNF184
C11orf86
IQCN
ANXA9
ADGRG1
KANK1
TADA1
SH3YL1
ACP1
WDR36
C3
C2CD2L
MTMR11
LOC100509620
DMAP1
KHNYN
INHBE
CBLN3
MST1
FBXO46
NEU4
MMP15
KIF5B
TAOK3
SUDS3
CDIP1
HAGH
FAHD1
DIP2C-AS1
SLC27A5
UBA5
MIA3
SCN9A
SEC16B
VEGFA
SMYD5
AKAP1
HCAR3
STX16
NUDCD1
UBA6
GPRC5C
ZNF710
LRP5L
HSD17B11
COMTD1
TUBG1
RETREG3
MTIF2
SERINC5
SARDH
PLXNB1
CRK
BLCAP
OTOG
SLC2A14
HJV
CSNK1A1
POLR2E
ABHD12B
POLDIP3
ADAMTS6
RARA
CIDEC
RBIS
PEX11G
MYADM
BRCA1
TMCO1
ZNF362
TLCD2
LPP
AMACR
TUBG2
PLXNC1
ASL
MTMR4
KMT5A
CCL16
RASA4B
DCBLD1
SLC28A1
SLC2A9
PNOC
RBP5
SPPL2A
MBLAC1
CBS
PCGF2
SLC47A1
PTTG1IP
RHBG
FAM20A
LRRC3
TECR
DNAJB1
PRR35
SERINC2
BAIAP2L2
PRR3
GNL1
ZNF512B
SHF
ANKRD40CL
PAX2
USP54
SERTAD2
GIPC2
CCR6
PMVK
CPHXL
GATA3
MKKS
CDKN1A
STARD7
PLK2
TRPM1
OR5B12
CAMKV
TBCCD1
DNAJB11
TOB2
MAP4K5
ATL1
SOD2
CAMSAP3
RAB32
CSRNP3
DDC
PACSIN3
ZSWIM3
ACOT8
RBMS1
IL17RE
PAK1
ZC3H3
ABCC3
SFRP5
ISOC1
SEH1L
USH1C
RPS7
SECTM1
MPI
HOXA3
SLC17A2
PPP1R12B
RAB11FIP4
TACO1
BCL2L1
ITPKC
COQ8B
CSRNP1
COMT
ACAD11
TMEM150A
PPIAL4F
PPIAL4E
PPIAL4D
TMEM140
SYNJ2
MRPS11
MRPL46
STAP2
MPND
TMEM127
CIAO1
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
KRT8
KIAA1522
ASGR2
NODAL
MSRB1
PLEKHS1
PPIAL4C
MLX
COASY
CAPN2
TMEM89
ZNF839
FZD5
CEACAM16
ATXN2
ARNT
APOA4
RENBP
ETFB
SPATA18
CD99
SCP2
CTSO
NEU1
ANKRD39
ODC1
IL17RB
CHDH
CFL1
SRC
SMLR1
ROMO1
NFS1
OR9Q2
INTS4
DNAJB3
CASTOR2
SCLY
PIK3R2
DLX2
POLR2H
CLCN2
KDM2A
DCDC2
RPL34
LOC102724265
IQSEC1
TAF4
LOXHD1
C5
OTULIN
HPCAL1
CNOT1
RHOQ
ATP6V1E2
ZNF302
ZBED1
DHRSX
ZNF747
NAPEPLD
LSM14B
SORBS2
USP37
CNOT9
GDF15
CPNE6
VPS54
ABCB6
TOGARAM1
KLHL28
GAMT
AHDC1
UGT1A1
APBA2
PGLYRP2
GNA11
ADI1
MRPL20
MOV10L1
ANXA2
ADRA1D
PPIAL4H
C2orf42
HMOX1
GPT
C6orf47
FEM1C
SLC35D1
LAPTM4A
FGG
HNF4A
APOE
LCE2D
PPIAL4A
CDC42BPA
PLEC
NET1
SLC39A5
SLC41A2
ZDHHC19
SLC51A
MYO18A
CDK5RAP3
PACSIN2
PPIAL4G
SPTBN1
GPHA2
AMDHD2
PCDH1
DRG2
SLC9B2
FNIP1
UGDH
MTFMT
GALT
ORM2
LOC102723360
SLC22A23
TMEM181
SENP1
PFKM
EFNA2
TJAP1
PGPEP1
ZNF444
LTBP4
EIF4G3
SMIM11B
SMIM11A
PLG
RNF126
GALM
FETUB
CLDN4
C1QTNF6
TMEM254
PNPLA3
SELENOI
ADGRF3
GALK1
ATG16L1
C16orf70
NIPSNAP1
SOAT2
PUSL1
ACAP3
PHF14
CD86
NRCAM
CHMP4B
SLC12A9
EPHB4
ZFAND2B
GMNN
PJA2
PPP1R9B
CPT1A
EHHADH
SLC39A14
CEP68
ST3GAL6
VPS28
ETV4
CCDC146
OVOL1
KPNA7
CRYGC
RNASE4
CHRNA4
ANG
TLCD4-RWDD3
TLCD4
PALM2AKAP2
C4BPB
PLIN4
C2CD2
ACSF2
ZMYND8
PLTP
NFATC2
SH3D21
PRR5
CHST13
CAPN11
UHRF1BP1L
PDLIM2
ERF
TPT1
APOA2
RCOR2
RIPK3
AP1B1
MAP3K14
TNXB
MINPP1
DPP6
CLDN14
RFPL2
NRSN2
MOGAT2
MARK2
ATP5MC3
FABP1
BCAM
U2SURP
PPP1R37
GSN
PIKFYVE
STARD4
PRR13
UMPS
H1-0
GCAT
CMPK1
CCL20
PIEZO1
RCL1
TTI1
RPS24
RPRD1B
POLR3A
ABR
PRM2
PRM1
FTH1
MPV17L
CLSTN3
YARS1
S100PBP
ZNF696
LIN54
SLC29A3
APOL4
LY6E
CDC42EP4
POLR3H
WFDC3
DNTTIP1
GRB7
MRGPRF
KIDINS220
RNPEP
PGAP3
DDX19B
C2
SOCS5
AKT2