ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748426 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◢ SRX748425: HCT 116

◣ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
SCRT2
KNL1
SKIV2L
NELFE
NDUFS1
EEF1B2
MTRNR2L8
MTRNR2L2
MSH3
DHFR
MIA2
NEK2
PHF12
CRYBG2
WDR36
KIAA2013
DNAJC25-GNG10
DNAJC25
ACSL5
RGPD2
RGPD1
ZFP36
PLEKHG2
ZSWIM3
ACOT8
ERICH3
SFRP5
DBP
SPON1
SEPTIN4
CSTF1
AURKA
MTRNR2L1
EXOC1
GPX4
SNRPA
C19orf54
PPIP5K2
GIN1
SLC41A2
LASP1
SH3D21
NR1I3
POLDIP3
SIAH2
RPS3A
LSM1
BAG4
ADAMTS6
MPI
ERBB3
PRR3
GNL1
NCS1
INAVA
CPLX2
LBX2
ATP5MC3
KDM3A
NDRG1
RPL34
PTPRF
LTB4R
LTB4R2
CIDEB
CHST11
PRKCSH
CCDC151
HDGF
SMG8
URGCP-MRPS24
URGCP
OCIAD2
MTMR11
C11orf49
PAX2
MTFMT
ZBED9
ARNT
TTC31
FUT5
LOC100509620
SASH1
UBE2R2
ABLIM1
C2CD2L
LENG8
B3GNT3
PCBP1
TRIM2
ZC3H10
RPL41
UROS
BCCIP
NLRX1
TAOK3
SUDS3
MVP
CCNI
YARS1
S100PBP
RPL27
RBBP5
RABGGTB
PJA2
RAPGEF1
SLC7A5
SCARB1
TPD52
PRKCI
VAC14
PPP5D1
CALM3
SH3D19
PTK7
SNRPF
PSMA5
SLC27A5
NR2F2
S100A16
PRDM10
SELENOI
ADGRF3
LIPK
CD86
ZNF696
KCNMB4
NRCAM
IDH1
CAMK2G
TJP3
PHACTR4
PYCARD
BORCS7
RTBDN
MAST1
MMACHC
CCDC163
MYRF
CCDC90B
SFXN3
PDZD7
IQCN
PHF14
CCND2
RAB17
OXCT2
CHCHD2
PTP4A1
ACY1
IL20RB
C19orf33
CD2BP2
RNF121
LOC100133315
ARID1A
RIPK4
CERS4
TRIP12
FBXO36
PEX11G
TMEM71
PHF20L1
CSNK1A1
SERINC2
EIF4A2
ATXN7L1
RAD51AP1
C12orf4
U2SURP
USP37
CNOT9
ZC3H12D
FBXO46
HOXA3
TNFRSF1A
LUC7L2
FMC1-LUC7L2
FMC1
SAXO2
EFL1
CCDC107
SLC20A1
C1QTNF1
SLC25A5
IGF2BP3
PWP1
COX16
TMEM169
PECR
MIDN
ARPIN-AP3S2
ARPIN
ABHD2
TMED4
SHISA5
CREB3L3
VPS54
FHL2
CTSO
NIBAN2
BCAR3
SERINC5
MLF2
PLA2G4C
SCNM1
LYSMD1
NDUFAB1
FIBCD1
C6orf47
GPANK1
CSNK2B
SAMD1
FBXW5
C8G
PRKCD
ALG14
METTL24
RCAN1
CPHXL
MAP4K5
ATL1
KPNA7
MSL1
ALDH3A2
LSM5
RPS26
DIDO1
TKFC
DDB1
RAD50
SCP2
VPS26B
NCAPD3
FCHO2
COMTD1
LOC730098
CCL27
IGSF23
KRTAP5-7
ANKRD66
RBP2
PHC2
ZFAND3
SPTBN4
BLVRB
KATNB1
KREMEN2
BORCS6
MGST2
CITED2
ADGRB1
NPTN
ZBTB8OS
RBBP4
NEK6
CSDC2
TRIP10
GPR108
SLC9A3R1
METTL7B
CYP17A1
SPAG8
HINT2
MBD3
SPHK2
PAK4
PPP1R9B
RDH5
BLOC1S1
CTSE
USP2
CORO1C
TMCO1
DKK1
EIF3F
EIF1AD
BANF1
RGS3
PLAAT3
ZNF165
ROMO1
NFS1
SNTB2
PDPK1
ITGA3
RNF114
CERS2
SPAAR
VWCE
HRCT1
SWSAP1
SH2D5
RAB11A
RARA
TYSND1
ERBB2
RPS6KA1
ADPRHL1
PPP1R37
FDXACB1
C11orf1
NCOA4
TDP2
ACOT13
TOB2
TTI2
CASTOR1
PLK2
AHSP
PRX
POLD4
GNAL
ABHD12B
SEPSECS
WBP1
INO80B
H4C3
H1-6
ADI1
CLASP1
WDR74
GAB1
MBLAC1
LAMP3
NR1D1
BTBD16
PLXDC1
STAT6
GPR137
WDPCP
MDH1
UFSP1
PDXP
ABCC3
SPTBN1
GTF3A
MED20
BYSL
SEC13
SELENOP
PKP4
CCDC148
HNF1A
CNNM3
HAAO
VIL1
SCAF11
VTN
SARM1
RBKS
BABAM2
SEBOX
TACR2
SLC7A7
ORC2
LRRC1
PINK1
PCNX3
MAP3K11
GET1
SLCO2B1
KIF21A
PCYT2
PANK1
NUMB
SPATA25
NEURL2
CTSA
PABPN1
ARHGAP27
IST1
CLIP2
DOCK6
TATDN3
NSL1
AHCY
MACC1
ZNF567
GPR171
ZBTB48
CDK3
SERPINB1
SMPDL3A
EPS8L2
DEAF1
PHETA1
MMADHC
HADHB
HADHA
ACOX2
AFF1
CDC14B
GGT1
NRL
DCAF11
GPR35
ABCC6
USP18
SEC23A
LY75-CD302
LY75
AP1AR
FGFR3
F10
AQP11
CARHSP1
RAB37
DENND2B
AP1M1
EPS8L3
ACY3
GCLC
PLEKHG6
AGMAT
SLC19A3
SUCLA2
SMG5
GLMP
HNMT
DNAJC22
B4GAT1
EDEM1
AJUBA
IQANK1
FAM83H
PRUNE1
NQO2
MINDY1
ZNF232
USP6
PPIL2
VAMP5
GUCD1
DENND5B
RHEX
DOCK5
NDUFA6
ZNF219
DHRS3
CDR2
AHSG
SRSF11
LRRC40
WEE1
C2orf88
MYD88
ACAA1
PUS10
PEX13
COPS4
NR0B2
FBXO31
GDI2
CDHR2
SDCBP2
CA9
ARHGEF39
LURAP1L
TRAF7
TIGD3
PDF
GTF2I
TRIM15
TRIM10
SPATA2
GLRX
NQO1
PCGF1
APOB
XYLB
TMEM177
APOA1
ANKS4B
KIF1C
INCA1
AFP
SLC45A4
BCAR1
TBC1D22A
TK1
BLOC1S5
FYB2
LARP1
TCIRG1
MRPL2
KLC4
GSDMD
LOC100129484
RAB5IF
CTDSP1
MAN2C1
ZNF764
TMBIM1
ATP7B
KLHDC2
PLXNB2
IL32
PERP
SMARCD1
PPP1R27
MCRIP1
HGD
IQGAP2
GJB1
MAN1A1
PTDSS2
ANO9
MLXIPL
CBY3
CPPED1
ZNF827
PLEKHB2
CYB5R3
FASTKD1
SMAD3
C11orf24
CCDC142
ADAP1
SPPL2B
LSM7
CPNE7
APOC3
IFNGR1
LRP1
DOK4
NEK4
ITIH1
WNK4
MBNL2
EPHX2
SOS1
KDELR2
NID1
PRAP1
SRMS
PSPN
GNG4
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
CLIC1
F7
GAL3ST1
SMAGP
UBR4
PALM3
PEPD
PPP4C
TRIM47
STK24
PDE11A
RAB43
HINT1
TNFRSF10B
SPG7
LTV1
SPDYE14
SPDYE10P
PCGF5
SEPTIN9
IL1R1
NHSL1
PROCR
C1orf174
TNFSF15
ZNF214
NLRP14
ABCD3
SMIM19
SLC20A2
PRSS8
IRF2BPL
MGAT1
CFB
CDKN2AIP
GIP
UCKL1
OPA3
BCL9L
ATP5F1D
AGT
PRMT1
C9orf64
DNMT3A
TRIM14
TECTB
CA5A
PDGFB
WDR81
MBL2
QPRT
C1GALT1
RUVBL1
EEFSEC
TRAF4
ALG11
NCR3LG1
RASA4
TCAF1
PRXL2A
EGLN1
ZFAND2A
ATXN7
ENDOD1
ZNF184
C11orf86
ANXA9
SH3BGRL2
ADGRG1
KANK1
BIRC2
TADA1
SH3YL1
ACP1
C3
ZNF564
DMAP1
KHNYN
INHBE
CBLN3
MST1
NEU4
MMP15
KIF5B
CDIP1
HAGH
FAHD1
DIP2C-AS1
PEMT
UBA5
MIA3
SCN9A
RAMP1
SEC16B
VEGFA
SMYD5
AKAP1
GLYCTK
PAAF1
COA4
SIN3A
HCAR3
STX16
NUDCD1
UBA6
MYL12B
GPRC5C
ZNF710
LRP5L
HSD17B11
TUBG1
RETREG3
CACNB2
MTIF2
SARDH
TM4SF5
PLXNB1
CRK
BLCAP
OTOG
SLC2A14
HJV
POLR2E
CIDEC
RBIS
MYADM
BRCA1
ZNF362
TLCD2
LPP
AMACR
TUBG2
PLXNC1
ASL
MTMR4
KMT5A
CCL16
RASA4B
DCBLD1
SLC28A1
SLC2A9
PNOC
RBP5
EFNA1
SPPL2A
CBS
PCGF2
SLC47A1
PTTG1IP
RHBG
FAM20A
LRRC3
TECR
DNAJB1
PRR35
PGF
BAIAP2L2
ZNF512B
SHF
ANKRD40CL
PICALM
OSBP
HEXB
PRSS3
VTA1
NMBR
USP54
SERTAD2
GIPC2
CCR6
PMVK
GATA3
AGPAT3
MKKS
CDKN1A
STARD7
TRPM1
OR5B12
CAMKV
JMJD1C
TBCCD1
DNAJB11
SPATS2L
TMEM45B
SOD2
CAMSAP3
RAB32
CSRNP3
HMGCS1
DDC
PACSIN3
RBMS1
COBL
IL17RE
TANK
PAK1
SLC35A3
ZC3H3
ISOC1
SEH1L
USH1C
RPS7
SECTM1
INF2
SLC17A2
PPP1R12B
RAB11FIP4
TACO1
BCL2L1
ITPKC
COQ8B
CSRNP1
COMT
ACAD11
TMEM150A
ETFA
PPIAL4F
PPIAL4E
PPIAL4D
ADD3
TMEM140
SYNJ2
MRPS11
MRPL46
STAP2
MPND
ANK3
TMEM127
CIAO1
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
KRT8
KIAA1522
ASGR2
NODAL
MSRB1
PLEKHS1
PPIAL4C
MLX
COASY
CAPN2
TMEM89
ZNF839
FZD5
CYP4F3
CEACAM16
ATXN2
MYO1A
APOA4
RENBP
ETFB
SPATA18
CD99
NEU1
ANKRD39
ODC1
IL17RB
CHDH
ASAP2
CFL1
ZFYVE27
SRC
SMLR1
OR9Q2
INTS4
DNAJB3
CASTOR2
SCLY
PIK3R2
DLX2
POLR2H
CLCN2
KDM2A
DCDC2
LOC102724265
WT1
IQSEC1
TAF4
LOXHD1
C5
OTULIN
HPCAL1
CNOT1
RHOQ
ATP6V1E2
ZNF302
ZBED1
DHRSX
ZNF747
NAPEPLD
LSM14B
SORBS2
GDF15
CPNE6
TSPAN3
ENTPD2
ABCB6
TOGARAM1
KLHL28
GAMT
AHDC1
UGT1A1
APBA2
PGLYRP2
GNA11
LSM14A
MRPL20
MOV10L1
ANXA2
ADRA1D
PPIAL4H
C2orf42
RHOC
HMOX1
GPT
FEM1C
SLC35D1
LAPTM4A
FGG
HNF4A
APOE
LCE2D
GPBAR1
PPIAL4A
CDC42BPA
PLEC
NET1
SLC39A5
ZDHHC19
SLC51A
MYO18A
CDK5RAP3
PACSIN2
PPIAL4G
GPHA2
AMDHD2
PCDH1
DRG2
SLC9B2
FNIP1
WDR97
MAF1
UGDH
GALT
ORM2
LOC102723360
SLC22A23
TMEM181
SENP1
PFKM
EFNA2
TJAP1
PGPEP1
ZNF444
C1orf210
LTBP4
EIF4G3
SMIM11B
SMIM11A
PLG
RNF126
GALM
FETUB
CLDN4
C1QTNF6
TMEM254
PNPLA3
GALK1
CCDC93
ATG16L1
C16orf70
NIPSNAP1
PDZK1IP1
REG4
SOAT2
PUSL1
ACAP3
AAMP
CHMP4B
SLC12A9
EPHB4
ZFAND2B
GMNN
CPT1A
EHHADH
TPCN1
SLC39A14
MAMDC2
CEP68
ST3GAL6
VPS28
ETV4
CCDC146
OVOL1
PTK2B
CRYGC
RNASE4
CHRNA4
ANG
TLCD4-RWDD3
TLCD4
PALM2AKAP2
C4BPB
PLIN4
C2CD2
ACSF2
ARHGEF10L
ZMYND8
PLTP
NFATC2
PRR5
CHST13
CAPN11
GSTK1
UHRF1BP1L
PDLIM2
ERF
TPT1
APOA2
RCOR2
RIPK3
AP1B1
MAP3K14
TNXB
MINPP1
GUCA2A
DPP6
DTX2
CLDN14
DECR2
RFPL2
GRTP1
NRSN2
MOGAT2
LAMTOR5
MARK2
FABP1
BCAM
GSN
PIKFYVE
STARD4
PRR13
UMPS
H1-0
GCAT
CMPK1
CCL20
PIEZO1
DTX4
RCL1
TTI1