ChIP-Atlas: Target genes

Potential target genes for HNF4A

Query protein: HNF4A
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX748425 | HCT 116
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HNF4A's Target genes

◢ HNF4A: Average

◢ SRX026267: Caco-2

◢ SRX026268: Caco-2

◢ SRX6076676: ESO-26

◢ SRX360570: GP5d

◢ SRX360584: GP5d

◢ SRX748420: HCT 116

◣ SRX748425: HCT 116

◢ SRX748426: HCT 116

◢ SRX748433: HCT 116

◢ SRX748434: HCT 116

◢ SRX018625: Hep G2

◢ SRX018626: Hep G2

◢ SRX100505: Hep G2

◢ SRX150698: Hep G2

◢ SRX702025: hESC derived mesendodermal cells

◢ SRX702026: hESC derived mesendodermal cells

◢ SRX702027: hESC derived mesendodermal cells

◢ SRX702028: hESC HUES64

◢ ERX159250: LoVo

◢ ERX159251: LoVo

◢ SRX361882: LoVo

◢ SRX361888: LoVo

◢ HNF4A: STRING

KDM6B
SCRT2
MIA2
CRYBG2
MTRNR2L8
NDUFS1
EEF1B2
PHF12
PPIP5K2
GIN1
RBKS
BABAM2
SKIV2L
NELFE
NEK2
CSTF1
AURKA
ACSL5
DNAJC25-GNG10
DNAJC25
C11orf49
SCAF11
CCDC90B
CCDC107
URGCP-MRPS24
URGCP
LSM1
BAG4
SLC7A5
SFRP5
ATXN7L1
ZFP36
PLEKHG2
POLDIP3
MTRNR2L2
MSH3
DHFR
SLC9A3R1
WDR36
MTRNR2L1
CEP152
RTBDN
MAST1
NR1I3
RABGGTB
KNL1
CD2BP2
ZNF764
EXOC1
ZSWIM3
ACOT8
CDC14B
MTFMT
LASP1
DBP
U2SURP
SNRPA
C19orf54
LOC100509620
FHL2
RPS3A
KIAA2013
IST1
RGPD2
RGPD1
PLEC
YARS1
S100PBP
POLRMT
SEPTIN4
PLK2
IDH1
GFI1B
TSC1
INAVA
CD86
PRR3
GNL1
SH3D19
EIF1AD
BANF1
COL23A1
SPDYE14
SPDYE10P
SPON1
RPL27
RAB17
RPS7
SNRPF
EPS15
PIKFYVE
SASH1
CLCF1
KIF21B
PRKCD
ABHD12B
FBXW5
C8G
METTL7B
PPP1R37
SPAAR
HRCT1
C1QTNF1
ZNF383
ZC3H10
RPL41
EPS8L2
DEAF1
SYT7
LENG8
CCND2
TRIM2
MRPS28
ACY1
PCNX3
MAP3K11
SIAH2
ERICH3
PCBP1
OCIAD2
HDGF
ABLIM1
TBCCD1
DNAJB11
TNFRSF10B
GOLGA4
UROS
BCCIP
B3GNT3
TAOK3
SUDS3
LTB4R
LTB4R2
CIDEB
FCHO2
SAMD1
LARP1
COQ5
NCS1
FBXO46
DSTYK
PTP4A1
SHISA5
C1orf174
OGT
ATP5MC3
KREMEN2
LBX2
PRKCSH
CCDC151
STAT3
HNRNPH1
C11orf86
FAM98B
GOLGA8B
MYRF
ARPIN-AP3S2
ARPIN
RAPGEF1
RBM27
PCGF5
ZBED9
LIPK
ABCC3
ZNF219
OXCT2
ZNF564
RAD50
BORCS7
USP37
CNOT9
GLG1
SH3D21
ADGRA2
RBIS
PDAP1
BUD31
LOC730098
CCL27
PAFAH2
SNRPB
MSL1
FNDC11
DENND5B
MAN2C1
ANXA11
MRPS30
PTPRF
SPATA25
NEURL2
CTSA
KMT5A
TJP3
PRAP1
PDPK1
GUCA2A
HAO1
ADAMTS6
KCNC3
GPX4
INTS12
GSTCD
CREB3L3
KCNMB4
ALG10B
SEC23A
GFM1
ZKSCAN2
PIM3
LPIN1
ADPRHL1
RPL12
LRSAM1
KRTAP5-7
NUDCD1
KLF6
LOXHD1
LSM5
RPL23A
RAB34
MEAK7
SSTR5
ARNT
TMEM181
PSMA5
BAZ1B
KLRC3
EIF4A2
RAB11A
FRG2C
GJB1
CLASP1
CCNI
SH3BP5L
MKRN3
CENPN
SMARCD2
RCAN1
EPS8L3
TDP2
ACOT13
GAL3ST1
ATXN2
FRG2
KDM5A
CCDC77
COBL
HEXIM1
AHSP
SLC27A5
TATDN3
NSL1
GDF15
KPNA7
BBC3
PPP1R13L
POLR1G
RAD51AP1
C12orf4
EPB41L4B
ERBB3
TTI1
RPRD1B
USP16
PAQR4
PPP5D1
CALM3
BIRC2
TPD52
SYNGR4
PYY
NAGS
TRIP12
FBXO36
LHB
ATF7-NPFF
ATF7
SELENOP
SNTB2
CCDC59
RIPK4
RPL34
LAMTOR5
PEMT
SMIM29
TOB2
NFXL1
NUP62
IL4I1
ATF5
PJA2
C2CD2
TRIM15
TRIM10
RPGRIP1L
FTO
PRMT1
CHST11
RPS29
SMG7
HERC5
LGALS1
CALM2
H4C3
H1-6
SRSF11
LRRC40
MYC
USP2
RPS6KA1
MVP
FUT5
PAX2
GAB1
PLA2G2E
AAR2
H4C11
ZBTB48
AFF1
INTS4
PHF14
RBBP5
GALK2
COPS2
PHETA1
IQCN
KATNBL1
MTMR11
WDR90
IER5L
BCL6
SERINC5
EPS8
NUCKS1
C6orf47
PLXDC1
GPANK1
CSNK2B
PHC2
CAMK2G
C2CD2L
SLC41A2
BANP
TRIP10
GPR108
SAXO2
EFL1
GMEB2
MRPL34
DDA1
LAPTM4A
ZNF335
IGSF23
KLRC2
PRRG2
NOSIP
POLG
IL20RB
SLCO2B1
NQO2
ETV4
UBE2R2
HYAL2
TINAGL1
PYCARD
NCSTN
COPA
FBRS
SMAD3
MYL12B
KATNB1
NFATC4
KIF16B
MTFR2
KDM3A
NDRG1
MBD3
NR2F1
PABPN1
CASTOR2
H1-0
GCAT
NRBP2
ZNF165
RARA
RAB11FIP4
VPS54
C1QTNF6
ITGA3
ATF4
ZC3H12D
PLXNB2
LAMP3
PDE4C
COPB1
RGS3
NUP107
PTPRG
FIBP
CCDC85B
ZNF526
DEDD2
SELENOI
ADGRF3
PITX3
GBF1
SLC20A1
MAP4K5
ATL1
GCHFR
GPR137
PDE11A
WDR27
C6orf120
PSD
FBXL15
OPA3
PPP1R12B
TIMMDC1
APBA2
GBA
PARP2
PIPOX
CALML4
SYT12
PRDM10
SHF
NEDD4L
TRUB2
COQ4
BORCS6
TBP
PSMB1
PPP1R9B
MITD1
MEF2D
MMADHC
C19orf33
MBLAC1
PTPN6
C12orf57
STK35
H4C12
VTA1
NMBR
TTI2
POT1
SGO1
LFNG
MPI
RPF2
NR1D1
NME1-NME2
NME1
ALDH2
ARHGAP32
S100A16
IL32
ITFG2
FBXO33
PKP4
CCDC148
HNF1A
CNNM3
HAAO
CERS2
VIL1
VTN
SARM1
TMEM169
PECR
SEBOX
TACR2
SLC7A7
SEC13
PDXP
ORC2
LRRC1
PINK1
GET1
KIF21A
PCYT2
PANK1
NUMB
ARHGAP27
CLIP2
DOCK6
AHCY
MACC1
ZNF567
GPR171
ERBB2
CDK3
SERPINB1
SMPDL3A
HADHB
HADHA
ACOX2
GGT1
NRL
DCAF11
GPR35
ABCC6
USP18
CPLX2
LY75-CD302
LY75
AP1AR
MGST2
FGFR3
F10
AQP11
CARHSP1
RAB37
DENND2B
AP1M1
ACY3
GCLC
PLEKHG6
AGMAT
SLC19A3
SUCLA2
SMG5
GLMP
NCOA4
HNMT
DNAJC22
B4GAT1
EDEM1
AJUBA
IQANK1
FAM83H
PRUNE1
MINDY1
ZNF232
USP6
PPIL2
VAMP5
GUCD1
RHEX
DOCK5
NDUFA6
DHRS3
CYP17A1
CDR2
AHSG
POLD4
WEE1
C2orf88
MYD88
ACAA1
PUS10
PEX13
COPS4
NR0B2
MMACHC
CCDC163
FBXO31
GDI2
SFXN3
PDZD7
CDHR2
SDCBP2
IGF2BP3
CA9
ARHGEF39
LURAP1L
TRAF7
DIDO1
TIGD3
PDF
GTF2I
SPATA2
GLRX
NQO1
PCGF1
APOB
XYLB
SCARB1
TMEM177
APOA1
TTC31
ANKS4B
KIF1C
INCA1
AFP
SLC45A4
BCAR1
TBC1D22A
TK1
BLOC1S5
FYB2
CORO1C
TCIRG1
MRPL2
KLC4
GSDMD
LOC100129484
RAB5IF
CTDSP1
TMBIM1
ATP7B
KLHDC2
PERP
SMARCD1
PPP1R27
MCRIP1
HGD
IQGAP2
MAN1A1
PTDSS2
ANO9
MLXIPL
CBY3
CPPED1
ZNF827
PLEKHB2
CYB5R3
FASTKD1
C11orf24
CCDC142
ADAP1
SPPL2B
LSM7
CPNE7
APOC3
IFNGR1
LRP1
DOK4
NEK4
ITIH1
WNK4
MBNL2
EPHX2
SOS1
KDELR2
NID1
TKFC
DDB1
SRMS
NIBAN2
PSPN
GNG4
ALKBH7
HSPE1-MOB4
HSPE1
HSPD1
COL13A1
MSH5
CLIC1
F7
SMAGP
GNAL
UBR4
PALM3
PEPD
PPP4C
TRIM47
PTK7
STK24
RAB43
HINT1
VWCE
SPG7
LTV1
PAK4
SEPTIN9
IL1R1
NHSL1
PROCR
TNFSF15
ZNF214
NLRP14
ABCD3
SMIM19
SLC20A2
PRSS8
IRF2BPL
MGAT1
CFB
CDKN2AIP
GIP
UCKL1
BCL9L
ATP5F1D
AGT
PHACTR4
C9orf64
DNMT3A
TRIM14
TECTB
CA5A
PDGFB
WDR81
MBL2
QPRT
C1GALT1
MIDN
RUVBL1
EEFSEC
TRAF4
ALG11
NCR3LG1
RASA4
TCAF1
PRXL2A
PLA2G4C
EGLN1
ZFAND2A
ATXN7
ENDOD1
ZNF184
ANXA9
SH3BGRL2
ADGRG1
KANK1
TADA1
SH3YL1
ACP1
C3
DMAP1
KHNYN
INHBE
CBLN3
MST1
NEU4
MMP15
KIF5B
CDIP1
HAGH
FAHD1
DIP2C-AS1
UBA5
MIA3
SCN9A
RAMP1
SEC16B
VEGFA
SMYD5
AKAP1
GLYCTK
PAAF1
COA4
SIN3A
HCAR3
STX16
UBA6
GPRC5C
ZNF710
LRP5L
HSD17B11
COMTD1
TUBG1
RETREG3
CACNB2
MTIF2
SARDH
TM4SF5
PLXNB1
CRK
BLCAP
OTOG
SLC2A14
HJV
CSNK1A1
POLR2E
CIDEC
PEX11G
MYADM
BRCA1
TMCO1
ZNF362
TLCD2
LPP
AMACR
TUBG2
PLXNC1
ASL
MTMR4
CCL16
RASA4B
DCBLD1
SLC28A1
SLC2A9
PNOC
RBP5
EFNA1
SPPL2A
CBS
PCGF2
SLC47A1
PTTG1IP
RHBG
FAM20A
LRRC3
TECR
DNAJB1
PRR35
PGF
SERINC2
BAIAP2L2
ZNF512B
ZFAND3
ANKRD40CL
PICALM
OSBP
HEXB
PRSS3
USP54
SERTAD2
GIPC2
CCR6
PMVK
CPHXL
GATA3
AGPAT3
MKKS
CDKN1A
STARD7
TRPM1
OR5B12
CAMKV
JMJD1C
SPATS2L
TMEM45B
SOD2
CAMSAP3
RAB32
CSRNP3
HMGCS1
DDC
PACSIN3
RBMS1
IL17RE
TANK
PAK1
SLC35A3
ZC3H3
ISOC1
SEH1L
USH1C
SECTM1
INF2
HOXA3
SLC17A2
TACO1
BCL2L1
ITPKC
COQ8B
CSRNP1
COMT
ACAD11
TMEM150A
ETFA
PPIAL4F
PPIAL4E
PPIAL4D
ADD3
TMEM140
SYNJ2
MRPS11
MRPL46
STAP2
MPND
ANK3
TMEM127
CIAO1
INTS9
HMBOX1
MOGAT3
KIFC3
ENTPD8
LCAT
KRT8
KIAA1522
ASGR2
NODAL
MSRB1
PLEKHS1
PPIAL4C
MLX
COASY
CAPN2
TMEM89
ZNF839
FZD5
CYP4F3
CEACAM16
MYO1A
APOA4
RENBP
ETFB
SPATA18
CD99
SCP2
CTSO
NEU1
ANKRD39
ODC1
IL17RB
CHDH
ASAP2
CFL1
ZFYVE27
SRC
SMLR1
ROMO1
NFS1
OR9Q2
DNAJB3
SCLY
PIK3R2
DLX2
POLR2H
CLCN2
KDM2A
ALDH3A2
DCDC2
LOC102724265
WT1
IQSEC1
TAF4
C5
OTULIN
HPCAL1
CNOT1
RHOQ
ATP6V1E2
ZNF302
ZBED1
DHRSX
ZNF747
NAPEPLD
LSM14B
SORBS2
CPNE6
TSPAN3
ENTPD2
ABCB6
TOGARAM1
KLHL28
GAMT
AHDC1
UGT1A1
PGLYRP2
GNA11
ADI1
LSM14A
MRPL20
MOV10L1
ANXA2
ADRA1D
PPIAL4H
C2orf42
RHOC
HMOX1
GPT
FEM1C
SLC35D1
FGG
HNF4A
APOE
LCE2D
GPBAR1
PPIAL4A
CDC42BPA
NET1
SLC39A5
ZDHHC19
SLC51A
MYO18A
CDK5RAP3
PACSIN2
PPIAL4G
SPTBN1
GPHA2
AMDHD2
PCDH1
DRG2
SLC9B2
FNIP1
WDR97
MAF1
UGDH
GALT
ORM2
LOC102723360
SLC22A23
SENP1
PFKM
EFNA2
TJAP1
PGPEP1
ZNF444
C1orf210
LTBP4
EIF4G3
SMIM11B
SMIM11A
PLG