ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957411 | HGrC1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◣ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

LURAP1L
LAPTM4B
SERPINE2
TEX45
KLHL31
MMP20
MAN1A2
LIMS1
TBC1D1
DISP1
TUBG1
RETREG3
AGAP3
VAC14
TMEM268
IL20
SULT1C4
LMNA
TGIF1
DIAPH3
F2
LRRC61
MYO6
TNIP1
RASGRP3
SIRT1
EPB41L1
CASZ1
GSDMD
ECHDC3
C15orf39
PAX6
RBPJ
ANKRD34B
AADAT
DLX3
DACH1
BRD7
PPP3R1
CDK5RAP2
TYRP1
MIS18BP1
ME3
MYADM
SLC8A1
NDE1
MARF1
HCAR3
LIMK1
ALDH18A1
GAD1
PHLDB2
TRIB1
BCAT1
EPS15
TMEM229B
BIRC7
AMPD1
PEDS1-UBE2V1
PEDS1
PSD3
FMN1
CLIP3
FNIP2
CCDC33
ARHGAP22
TMPRSS11D
BCL10
RNF103
TTC39B
FST
ICAM2
PLCXD3
LTBP1
ANK2
GPR63
PLAU
H4C5
PELO
ITGA1
XRN2
ILKAP
BACE1
MCTP1
SPATS2L
MOXD1
SLAIN1
RBM27
YPEL5
TGM4
RILP
HOPX
CMTM6
RFTN1
PLS1
SLC2A2
SCD
TNRC6B
PPP1R12B
CHRNA9
P3H2
ALDH1B1
PSMD2
GAB1
MYOZ2
LRRC2
HOATZ
BTG4
LUC7L2
FMC1-LUC7L2
FMC1
MINPP1
TMCO2
KLHL5
KLRD1
LAMB3
SEC31A
CTCF
UBR5
UTP18
MBTD1
GATAD1
OTUD7B
CHST3
TBXAS1
STMN3
WARS2
B4GALT6
NUDT4B
ZFR
METTL17
PRSS53
ARSI
CABP7
FAM118A
ABTB2
IKZF5
ACADSB
NOS1AP
FLRT2
CTPS1
PTPRB
DDAH1
CCN1
OBSCN
SERTAD4
SLC35F2
PIWIL4
KCNN3
MS4A10
SRSF10
FDFT1
SLC1A4
KIFAP3
ZNRF3
IVNS1ABP
PDGFB
TOGARAM1
KLHL28
NUP153
OSGIN2
MTNR1A
VWA5B2
SIK3
AMPD3
KTN1
PPP1CB
DENND2B
RARA
SMAD3
MACO1
ABLIM1
SERINC2
C1orf100
PSKH1
DSP
NSMCE4A
KRTAP21-3
C11orf42
NUMB
MATN2
ZNF720
GPR37L1
BEST3
CKAP2
POU2F2
SERPINE1
TMTC4
NFIC
TMED8
SAMD15
ITPKC
COQ8B
AHCYL1
ZNF540
PLCXD2
ZNF571
C1QTNF7
RRNAD1
ISG20L2
CSF2RB
SMYD3
ALOX5AP
SPON2
SGK1
TFPI
PXN
SCG2
RRM1
IFI35
MBD1
KRTAP4-2
KRTAP4-1
CMYA5
MFNG
IL34
CPD
PRDM1
SKIL
LOC389199
SCNN1A
LTBR
CXCR4
ANK3
BEGAIN
WDR36
ZBED2
SHKBP1
PRDM10
CSGALNACT2
ATF7-NPFF
ATF7
RGPD8
RGPD5
DUX4
CABLES1
TADA1
TMEM263
PRMT5
MCM7
AP4M1
SIAH1
TXK
ZNF575
ETHE1
CCT5
ATPSCKMT
PRICKLE1
THEM4
PALM2AKAP2
HRG
ARHGAP24
MMP10
FHL2
TLR1
UHRF1
ABHD17C
SLC7A2
PIM1
ENOX1
CENPA
SLC25A25
NAIF1
COMMD1
OR4F3
OR4F29
OR4F16
TNFAIP3
TRAPPC3L
COL7A1
AKIRIN2
PDLIM7
PHF19
RAB27A
ASCL3
DGLUCY
AGPS
FBXL7
C3orf20
SLC4A8
GALNT6
SLC46A3
SLC51B
SERPINB8
MARCHF7
NDEL1
RICTOR
FAM172A
NR2C2
SPDYE1
RPL23
CXADR
DERL3
DYRK2
CCPG1
C15orf65
GRSF1
MAP3K2
SPTBN1
MAST2
CDCA4
ETAA1
TMEM40
USP30
PRRT2
PAGR1
MAZ
TTC32
OR9I1
NINJ1
MRPL2
KLC4
TMOD1
STAT5B
GTF2A1
ADCY10
SNX25
PXT1
KCTD20
AGBL2
SETD6
LOX
JCAD
MTRNR2L1
SHCBP1
BET1
CREB5
CHN1
CDKN1A
NDST2
ELN
C1R
SMG9
MAD2L2
DRAXIN
RUNX1
CPNE2
UQCRC1
NKX6-3
NSMCE1
NTMT1
PSRC1
BRIX1
EIF2S3B
VOPP1
GPATCH1
STK10
DIP2B
FRG2
TES
C5orf63
PGGT1B
DNAJC28
BRAP
ACAD10
PANK2
TNFSF4
RGPD3
LONRF1
NEK6
SELENBP1
PTH2
GFY
CDKN2AIP
ZNF576
TM6SF1
IRGQ
EMID1
SP4
C2CD2
ESM1
EPB42
ECE1
LRP5
CYP3A5
KDM6B
ANXA8L1
TNFRSF12A
CLDN6
THOC6
HCFC1R1
ARHGDIA
STC2
PSMD10
ATG4A
FCHSD2
PPP4R4
INSYN2A
NPC1
LONP2
ABCC11
ZMIZ1
TENM3
NDUFAB1
C7orf65
ATP6V0D2
FSTL3
TRAK1
UQCRB
NUP214
DAB2
SNRPB
ANKLE2
OTUD1
HEXB
PCSK1
GNRH1
FRRS1
ERCC1
DOCK9
ABCC3
H2AZ1
DNAJB14
NCAPH
GSDME
BPIFC
NEDD9
SPACA6
PGM1
MEF2D
SAMD14
ZBTB5
PAXBP1
GNPNAT1
SEC24B
METTL11B
TMEM217
TBC1D22B
RAPGEF2
DDN
UBXN8
MCAM
FAT4
SYTL2
PTBP1
PLEKHA5
UPK3BL2
MACIR
SH2D7
SPDYE2B
SPDYE2
DENND2A
CELF2
IL6
SLC12A2
MLH1
EPM2AIP1
PRKAB2
CHD1L
LENG8
SERPINB6
RHOJ
DKC1
SMAD7
SARAF
DDI2
SLAMF1
EPB41L2
TRMU
SEPTIN8
NRP2
COL3A1
CCDC9B
SNX30
DMXL2
DNAJB1
TECR
SH3D19
MYL12A
KRBA1
TUSC1
LIMS2
IGF2BP1
GPR179
COPS8
PTHLH
SHQ1
SLC2A14
RPS15A
ITPRIP
RHOG
TGFB2
NEDD4
MTFP1
GRIA4
CYP19A1
CYP2S1
CDH11
GNAT3
CENPE
DEPP1
NODAL
VPS50
LONRF2
HEPACAM2
EPB41
GTF2B
ZFPM2
UBL3
SYNPO
FGGY
ANXA6
TRAM1
MYL9
KDM5C
ATP5F1E
KANSL1L
TMEM183B
XPO1
ZFAND2B
MYLK
CXCL6
TUBA1C
PADI1
XAF1
MPHOSPH6
EFHB
COL8A2
BCAR3
CNOT1
TMC7
PLEKHA8
ZNF592
THAP12
GVQW3
NOL4L
CPT2
GTF3C3
EFR3A
UNKL
RGS4
KLHL21
EGFR
PHC2
GNG11
KDSR
RNF212
PPP1R13L
POLR1G
FOXS1
CDC37L1
GAB2
CRPPA
ABCC10
CDHR2
SULT2B1
RNF44
CLDN14
ZNF460
SYT14
TMEM106B
RBMS2
DAZAP1
SPATA31C1
PRSS23
DNAJB4
LYZL1
GADD45A
FAM160B1
CGA
AHI1
ITLN2
IPO13
RNASE9
ZBTB20
H2AZ2
AP1AR
MUSK
ARID1A
TRUB2
TRIM32
COQ4
ASTN2
ARHGDIB
ZZZ3
RAB17
WIPF1
COL12A1
EPSTI1
ZNF225
FUCA1
SFXN2
PCBP4
ARL3
ABHD14B
ABHD14A-ACY1
ABHD14A
TRABD2A
ZBTB2
ZNF821
PRKACB
ST3GAL2
VMAC
PGAP4
NDUFA11
CALD1
TMEM245
STMP1
PTPRD
ZDHHC22
STX1B
CHMP2B
ID3
ZBTB38
HINFP
KAT5
TMCC1
TBL1X
DACT1
PPP6R1
FAM187A
RCAN3
TAS2R10
NCKAP5
LPIN2
ACE2
SPATA6L
PLPP6
GRAMD2B
FAM104A
ADGRL2
IGF1
RNFT1
SMIM4
SLC41A2
NT5DC2
PMEPA1
HAUS7
WBP1L
SOX30
PRRC2B
CCDC30
BDNF
SCD5
FAM222B
PGR
PCIF1
CCDC88A
KIAA1217
ITM2C
CWC22
DUSP1
ASB8
DPYSL3
GRHL3
PBXIP1
PAPSS2
NKD1
LOC101928120
CES4A
CAPNS2
E2F3
SLC39A13
RHOBTB2
SERPIND1
TBC1D7-LOC100130357
TBC1D7
SOWAHC
SEPTIN10
AGAP11
ADIRF
ZNF76
PCP4L1
ANXA8
ZFAND3
ACE
FDXACB1
C11orf1
USP9X
SCX
NUGGC
ELP3
SCMH1
CSN3
OSBPL6
BUB1
ARPP19
TRIM69
SUN3
ST3GAL6
FAM110A
TMEM95
KCTD11
TEX46
KDM1A
VDAC2
TANK
CLCN3
MED21
USPL1
HMGB1
WWC2
RIPK1
CCL20
MNX1
MGST1
IFNK
TTYH1
MTHFD1L
METTL21C
LIMK2
NDUFS5
SGMS2
DENND5B
VGLL4
TMEM126B
DLG2
ID2
EP400
MYLK3
KMT2A
RNF214
PCSK7
CLDN2
KANK1
RPL24
MTRNR2L2
MSH3
DHFR
FRG2C
MTRNR2L8
ID1
SLC7A5
FBRS
PITX2
ZNF664-RFLNA
ZNF664
CCDC92
ZNF148
OLFM2
PRRG2
NOSIP
ROR2
CST6
MTIF2
DNAJB5
LEFTY2
GIP
STAM2
HDGF
LEFTY1
NFKBIL1
ATP6V1G2
GID4
ATPAF2
TSKU
SMARCD3
GNB2
SSBP3
ZNF341
CAV1
PLAGL1
CSRNP1
NPM3
FGF8
ASIC1
SREBF1
B3GNT6
BAMBI
PLK3
FGF17
NEURL1B
JMJD1C
DGAT2
SNX18
MYL10
DHRS3
STOX2
AGO1
TAGLN2
CXCR5
BMF
UAP1
USP2
OAZ1
TRIOBP
VPS28
CGB5
CGB1
CEP55
GLIPR1L1
CAPS2
NPFFR2
DVL1
GADD45B
ZBTB4
SLC35G6
POLR2A
MYBPH
INPP4B
ARHGEF18
BMPR2
CGB8
ACOX3
CER1
CLTB
CLCF1
ELAPOR2
LAMC2
DCAF10
AGFG2
H2BC11
H2AC11
FPR3
MDN1
LRRC37A3
KLF10
CTNNB1
CALM1
H2BC21
H2AC21
H2AC20
DRAP1
C11orf68
PLEK2
ZNF609
DECR1
OCA2
APC
SLC1A1
LEMD3
LOC100287896
LIPT2
GAS2L1
CHST11
RHOD
SLC6A15
LPCAT3
VDAC1
WDR54
C2orf81
KAT6A
SRSF6
MINDY3
RNF223
ZNF792
PGK1
POU5F1
SHISAL1
ASB2
ZNF655
MARCHF5
CPEB3
AXL
SLC39A7
RXRB
RING1
HSD17B8
POU2F3
EPG5
NPAS4
MAP2K3
GTPBP6
UBE2B
CDKL3
WDR74
IL17B
CNOT3
LAPTM5
GOLGA6C
FXYD6-FXYD2
FXYD6
SLC36A2
ARMC7
GADD45G
FSCN1
FGF1
POLD4
S100A2
KRT80
C5orf46
SMIM35
GPR183
OSM
PIK3CD
BAIAP2
FAM184A
NOTCH3
STX1A
KCNF1
GOLGA6D
MYOM3
CD8A
ACSS3
FOXJ3
BLOC1S2
LRTM1
NARF
BHLHE40
ETFB
LBH
CCN2
AMHR2
MYOM1
BCL11B
CLTC
LRP12
PAQR9
KCNK9
HS3ST2
HNRNPA2B1
GLIS3
CBX3
PLXDC2
KANK4
HSP90AB1
NOCT
MAPK13
LRP6
AFF1
PALD1
MARCHF10
MAP3K9
UPK3BL1
BCL11A
CGB3
KLF4
CALM2
SFT2D3
NUF2
GJB4
COL16A1
CHD2
MLLT11
CDC42SE1
OVCA2
IFRD2
DACT2
CCDC200
ROR1
REV3L
RPRM
UQCRHL
NEDD4L
CEMIP
WNT3
EOMES
CFLAR
ALDH7A1
C2orf74
MRI1
TOMM20
PCK2
NRL
RET
PAWR
AQP3
PLEC
GOLGA6A
UBA1
STK40
PITPNM3
TMEM107
INPP5A
MTMR11
DST
EIF4E
CDH15
SUPT6H
SDF2
FAM20C
PURA
PLEKHA7
TUBB
SLC38A9
MDC1
IGF1R
GCNT1
ZNF354A
MAMDC2
PRDX1
ERRFI1
SLC25A45
FRMD8
EXT1
MUC3A
MED23
TTLL2
BCAR1
ZNF296
GEMIN7
RNF11
H2AX
KCNJ16
CCNI
ZSWIM4
ZNF641
ZFAND2A
RRBP1
H4C11
PPP2R2A
NDUFS8
SRSF7
SMIM8
MTF2
H1-2
GRAMD4
ZC3H6
KCNK3
DSTYK