ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6957485 | HGrC1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◣ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

DUX4
SIRT1
LAPTM4B
TBC1D1
MAN1A2
FRG2C
INSYN2A
VAC14
LURAP1L
DLX3
KLHL31
IL20
TGIF1
RBPJ
DIAPH3
MTRNR2L1
TUBG1
RETREG3
TEX45
F2
LIMS1
RNF103
SLC8A1
PRRG2
NOSIP
MCTP1
TOGARAM1
KLHL28
ZZZ3
CMTM6
SULT1C4
HCAR3
THEM4
RASGRP3
MMP20
FRG2
DISP1
TNIP1
CCPG1
C15orf65
TMEM268
PIWIL4
ANXA8L1
ICAM2
PPP3R1
METTL17
GSDMD
ANKRD34B
CTCF
DERL3
SERPINE2
E2F3
CCDC33
KCNN3
SERPINB8
TNFRSF12A
CLDN6
THOC6
HCFC1R1
IKZF5
ACADSB
AADAT
FAM172A
PLCXD3
LMNA
MMP10
BET1
C15orf39
MIS18BP1
LIMK1
SNX25
GAB1
MYO6
BCL10
TMEM263
FDFT1
ZNF609
RICTOR
ME3
MYADM
ASB8
REV3L
SPATS2L
DNAJB1
TECR
SLC38A9
PPP1R12B
CNOT1
PANK2
FNIP2
ECHDC3
RRM2B
PDLIM7
ABLIM1
CENPA
XRN2
AHCYL1
COPS8
DNAJB4
CASZ1
MBD1
LRRC61
ARHGAP22
STMN3
PHLDB2
KDSR
FLRT2
CPNE2
KTN1
PLXDC2
KMT2A
CDK5RAP2
TGM4
PEDS1-UBE2V1
PEDS1
LOX
RHOBTB2
LAMB3
GAD1
SCD
RILP
IFRD2
GNB2
BRAP
ACAD10
TAGLN2
NDE1
MARF1
SPTBN1
TTYH1
ZNF540
TMTC4
ZNF571
TENM3
DSP
NFKBIL1
ATP6V1G2
SKIL
PLS1
PHF19
ABCC3
LRRC2
ARSI
AMPD1
CTNNB1
C1QTNF7
MACO1
TNRC6B
JCAD
FOXJ3
BIRC7
FMN1
CABP7
AGAP3
GPR63
SEC62
ZNF764
ITPRIP
SERPINE1
FBXO46
TMCO2
WDR36
OTUD7B
PELO
ITGA1
PSKH1
RET
ZNF148
ANK2
NUDT4B
ALDH1B1
COL3A1
PRKAB2
CHD1L
TLR1
HSPH1
FSTL3
YPEL5
RAD23A
CSF2RB
NUP153
NUMB
NOL4L
BPTF
TBC1D7-LOC100130357
TBC1D7
ARHGAP10
EPS15
H2AZ2
PDS5B
RBM27
MOXD1
UBR5
ZNF592
B4GALT7
TRAPPC3L
SPDYE1
ZNF217
MED23
BRIX1
CXADR
CDKN2AIP
KLF11
UBE2F
STPG3
NELFB
CHRNA9
DECR1
LENG8
FAT4
DSTYK
SRSF10
SARAF
SETD6
DOCK9
ASIC1
SLC35F2
TRAM1
EPB41L1
TMEM229B
EPB41
ST3GAL2
STK10
WRNIP1
MACIR
WARS2
FCHSD2
ETAA1
CPT2
H1-2
ZRSR2
PSMD2
HOATZ
BTG4
DYRK2
ITPKC
COQ8B
TRIB1
H4C5
NCAPH
SEC24B
WDR81
TLCD2
CBFB
COL7A1
BCAT1
SLC2A14
NFAT5
KDM6B
VWA5B2
ZNF341
UHRF1
AP1AR
UCKL1
PDGFB
PAX6
CHST3
RNFT1
ID2
GTF2B
TUSC1
USPL1
HMGB1
MEF2D
PEMT
ERCC1
ID1
ZNF575
ETHE1
MTF2
LMO4
SLC25A25
NAIF1
SIAH1
ZNF235
TTC39B
RARA
ARHGDIA
DPYSL3
SMG9
SMNDC1
FAM110D
ARHGAP24
H2AZ1
DNAJB14
SERTAD4
XPO1
TYRP1
EPSTI1
PRSS53
GSDME
ZFR
FN1
PTEN
KLLN
DACH1
SLC2A2
UBAC1
LDHA
MADD
FHL2
TFPI
ZNRF3
SERINC2
IL6
RHOG
PINK1
MTIF2
SLC39A13
ZNF354A
RRM1
NDEL1
PIGX
MT2A
CEP19
TCTEX1D4
BTBD19
CHMP1B
FDXACB1
C11orf1
ZNF296
GEMIN7
FBXL19
ZBED2
ZCCHC4
LIMK2
UTP18
MBTD1
TEAD4
NEURL4
TADA1
C1orf100
SP4
IGF2BP1
RABEP1
UBE2B
CDKL3
CABLES1
SLC46A3
XAF1
NPC1
SAMD14
PDPR
LOXL3
DOK1
NFIC
IFI35
FEM1A
AURKAIP1
METTL11B
DCAF10
RAPGEF1
SMAD7
BRD7
AGBL2
PUS10
PEX13
ZNF142
MICOS13
HSD11B1L
BCS1L
CENPE
FAM118A
TMED8
SAMD15
USP30
PMEPA1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SPACA6
SLC7A5
FBRS
PITX2
NODAL
ZNF664-RFLNA
ZNF664
CCDC92
OLFM2
ID3
SMYD3
SMAD3
ROR2
CST6
DNAJB5
PPP1R13L
POLR1G
CLDN14
LEFTY2
GIP
STAM2
HDGF
TMEM95
KCTD11
LEFTY1
GID4
ATPAF2
SEC31A
TSKU
SMARCD3
ALOX5AP
EP400
DDAH1
CCN1
SSBP3
CAV1
PLAGL1
CSRNP1
NPM3
FGF8
SREBF1
PLCXD2
IVNS1ABP
B3GNT6
BAMBI
PLK3
FGF17
NEURL1B
JMJD1C
DGAT2
SNX18
MYL10
DHRS3
MS4A10
STOX2
KAT5
AGO1
ALDH18A1
KANK1
PLAU
MRPL2
KLC4
CXCR5
BMF
UAP1
USP2
OAZ1
TRIOBP
VPS28
CGB5
CGB1
CEP55
CCDC88A
WBP1L
GLIPR1L1
CAPS2
ANKLE2
NPFFR2
HOPX
KLHL5
PSD3
DVL1
GADD45B
ZBTB4
SLC35G6
POLR2A
CLIP3
MYBPH
TMPRSS11D
BEST3
INPP4B
UPK3BL2
FST
ARHGEF18
LTBP1
BMPR2
CGB8
ACOX3
CER1
CLTB
MTHFD1L
CLCF1
DENND2B
ELAPOR2
LAMC2
CDCA4
MFNG
AGFG2
H2BC11
H2AC11
FPR3
ILKAP
BACE1
OSGIN2
SLAIN1
MDN1
LRRC37A3
MTNR1A
HAUS7
PTPRB
KLF10
C11orf42
RFTN1
CALM1
H2BC21
H2AC21
H2AC20
DRAP1
C11orf68
PLEK2
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
MYOZ2
OCA2
APC
NSMCE1
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LEMD3
AGPS
LOC100287896
LIPT2
GAS2L1
CHST11
RHOD
ANXA8
SLC6A15
KLRD1
LOC389199
LPCAT3
VDAC1
WDR54
C2orf81
SPON2
RUNX1
SOWAHC
SEPTIN10
GATAD1
TBXAS1
KAT6A
SRSF6
MINDY3
B4GALT6
RNF223
ZNF792
PGK1
CDKN1A
POU5F1
SHISAL1
ASB2
ZNF655
MARCHF5
CPEB3
AXL
ABTB2
SLC39A7
RXRB
RING1
HSD17B8
CKAP2
POU2F3
EPG5
PHC2
NOS1AP
CTPS1
NPAS4
MAP2K3
PRMT5
OBSCN
GTPBP6
MCM7
AP4M1
WDR74
IL17B
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
FXYD6-FXYD2
FXYD6
SLC36A2
ARMC7
GADD45G
FSCN1
RAB17
FGF1
DUSP1
POLD4
S100A2
NEDD9
KRT80
C5orf46
SMIM35
PPP6R1
SIK3
GPR183
OSM
PIK3CD
BAIAP2
AMPD3
FAM184A
PPP1CB
NOTCH3
AKIRIN2
STX1A
KCNF1
GOLGA6D
MYOM3
WWC2
VOPP1
CD8A
ACSS3
BLOC1S2
LRTM1
NARF
BHLHE40
ETFB
VDAC2
LBH
CCN2
ZNF460
AMHR2
MYOM1
NSMCE4A
KRTAP21-3
BCL11B
CLTC
MAP3K2
LRP12
PRRT2
PAQR9
PAGR1
MAZ
MATN2
KCNK9
HS3ST2
HNRNPA2B1
GLIS3
CBX3
CALD1
KANK4
UQCRB
HSP90AB1
ZNF720
NOCT
MAPK13
GPR37L1
LRP6
AFF1
POU2F2
PALD1
MARCHF10
MAP3K9
UPK3BL1
FBXL7
BCL11A
CGB3
KLF4
CALM2
SFT2D3
NUF2
GJB4
COL16A1
CHD2
MLLT11
CDC42SE1
OVCA2
RRNAD1
NTMT1
ISG20L2
EPB42
DACT2
CCDC200
ROR1
SGK1
PXN
SCG2
RPRM
UQCRHL
NEDD4L
CEMIP
WNT3
TEX46
KRTAP4-2
KRTAP4-1
EOMES
CMYA5
CFLAR
ALDH7A1
TES
C2orf74
IL34
MRI1
HEXB
CDHR2
TOMM20
PCK2
NRL
CPD
PAWR
AQP3
PLEC
KANSL1L
GOLGA6A
UBA1
STK40
PITPNM3
TMEM107
INPP5A
MTMR11
DST
SCNN1A
PCIF1
NUP214
LTBR
FOXS1
MTFP1
EIF4E
CXCR4
CDH15
SUPT6H
SDF2
FAM20C
ANK3
BEGAIN
PURA
PLEKHA7
TUBB
SHKBP1
MDC1
PRDM10
IGF1R
CSGALNACT2
GCNT1
ATF7-NPFF
ATF7
MAMDC2
PRDX1
ERRFI1
SLC25A45
FRMD8
EXT1
C5orf63
MUC3A
TXK
TTLL2
BCAR1
RNF11
H2AX
CCT5
ATPSCKMT
PRICKLE1
KCNJ16
CCNI
PALM2AKAP2
ZSWIM4
ZNF641
HRG
ZFAND2A
RRBP1
H4C11
PPP2R2A
NDUFS8
IGF1
UQCRC1
DAB2
SRSF7
SMIM8
GRAMD4
ZC3H6
KCNK3
ABHD17C
TTLL8
SLC7A2
MTRNR2L9
MIXL1
TCF7
PRC1
ARHGAP28
LONP2
FLNC
FAM178B
ABCC11
LRP5
H4C12
CTNNA1
AGXT2
POLDIP3
PIM1
RHOB
FAP
ENOX1
SETD5
COMMD1
SNX14
OR4F3
OR4F29
OR4F16
F13A1
ATXN7L2
TNFAIP3
RCAN3
PARL
LOC100509620
USP53
USP42
RCC1
AKAP13
TTC9
RAB33A
ETS1
BCAP31
ARHGEF4
ABCD1
UGT1A3
LARS2
HEXIM2
UBE2D2
SPOCK3
RAB27A
GRIA4
SETD1B
P2RY2
KPNA7
BUD13
ASCL3
SLCO5A1
PAFAH1B1
DGLUCY
SLC5A3
MRPS6
CSKMT
C3orf20
C11orf98
INAVA
ADGRG1
SLC4A8
S100A10
ITLN2
GALNT6
ZBTB45
SLC51B
SH2D7
PIEZO1
TRPC1
MARCHF7
FEM1C
ZNF853
TMEM272
IGFBP3
PTHLH
NR2C2
NIBAN2
C2CD2
B4GALT2
ATP6V0B
ARL6IP1
TRDMT1
TP53TG5
SLC44A1
RPL23
IL17RA
LIMS2
ISG15
HEXIM1
AGRN
RRAD
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
UBAP2
NTN1
CSRNP2
C12orf65
ANGPT2
ZNF165
SOX18
DENR
ADGRF2
ZSWIM7
TTC19
SLC20A1
RNF213
MYT1
GNAL
ITGAE
KRT19
ANKDD1A
SRSF2
MFSD11
GTF3C3
ANAPC11
ALYREF
ZNF558
TRIM55
PTPRE
MARS1
LAMA5
DPPA4
ARHGAP9
ABR
SRSF5
SPDYE14
SPDYE10P
LOC100130520
CD300H
TIPARP
KMT5B
ZNF143
MTHFD2
THAP4
VIM
SACM1L
RND1
NOS3
MAST2
FAM83A
RIMBP3C
RIMBP3B
KMT2E
CDC37L1
SKP1
RNF32
FZR1
ADAM19
USP22
TTF1
TMEM40
SBF1
ELMO1
CFAP77
ATAD2
MIPOL1
GUCA2A
CRCP
TTC32
OR9I1
NINJ1
ITGA5
HNRNPD
RAD54L2
CDHR3
HOXD13
EVX2
TMOD1
IKZF3
H2AW
DNAJA1
APTX
ADAMTS18
ZAP70
TUBA1C
STAT5B
TPI1
TINAGL1
GNAS
GALNT9
ATP6V1B2
MAP7
LDLRAD4
TNPO1
RAI1
BMP8B
VGLL3
TRABD2A
TMEM185A
SEMA3E
SCOC
LHX1
DDI2
CAMSAP2
NUDT15
ADCY10
ACSL3
VANGL2
SLC38A2
PXT1
KCTD20
IL21R
R3HDML
FOXI1
VAMP1
NAPRT
MROH6
MLXIP
AGPAT3
MECOM
LSM14A
LBR
MCL1
HERPUD2
BTG1
RBMS1
CCL20
SNX16
PIK3R3