ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064492 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◣ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

ROR2
GID4
ATPAF2
SLC7A5
HDGF
SSBP3
FGF17
SMARCD3
CEP55
TSKU
PMEPA1
PITX2
ELAPOR2
AGFG2
USP2
APC
PLK3
MINDY3
ZNF792
EPG5
LEFTY1
FXYD6-FXYD2
FXYD6
SLC36A2
ARMC7
EPSTI1
GPR183
KCNF1
ACSS3
LRTM1
ETFB
MYOM1
BCL11B
LEFTY2
CER1
SLC1A1
DACT2
NODAL
ACOX3
WDR54
C2orf81
UQCRHL
CFLAR
C2orf74
TOMM20
ID3
CSRNP1
ZNF664-RFLNA
ZNF664
CCDC92
ALOX5AP
IGF1R
ID1
LAPTM4B
NEURL1B
MTRNR2L8
AKAP13
RAB33A
ARHGEF4
SPOCK3
RAB17
SLC5A3
MRPS6
MTRNR2L2
MSH3
DHFR
NPFFR2
TMEM272
TP53TG5
TTC39B
DGAT2
NTN1
ANGPT2
ADGRF2
MYT1
ANKDD1A
ZNF558
MARS1
ARHGAP9
SPDYE14
SPDYE10P
SACM1L
TTF1
CFAP77
CDHR3
MTRNR2L1
HOXD13
EVX2
ZAP70
ATP6V1B2
CST6
RAI1
TMEM185A
SEMA3E
GRSF1
FOXI1
AGPAT3
LBR
COPS8
FOXN4
ZNF296
GEMIN7
CELA3B
GPR19
DECR1
MIXL1
PAX4
NBL1
SLC6A1
PIP5K1B
TDGF1
SMAD3
ALK
DUSP5
ID2
ROR1
ZNF587B
ARF1
PLAGL1
PLPP4
SOX18
TCEA2
H2BW2
GNA13
SLC26A7
UBA1
RXRG
PRR5L
TLE2
FLVCR2
HABP2
DUS2
DPEP2NB
DDX28
DNAJB2
TVP23B
CELA3A
CASTOR2
MRPL22
GEMIN5
RNF19A
CYTH1
ASIC1
CUEDC1
ARID5B
MDN1
APOL3
IL17RA
AASDH
LPGAT1
SMAD2
PKHD1L1
BRD7
TBC1D14
ALG14
PAQR9
CKM
ADPGK
RUNX1T1
HOXA2
ACSM4
CAV1
GCNT1
ZBTB18
RRBP1
SPACA3
DENND2B
VIPR2
WDR25
WARS1
SLC34A2
LGR5
FGF5
CFAP410
FGF1
IL17RD
FBXO34
IRF2BP1
IFIT3
SUOX
HNRNPD
TRMT112
PRND
PRDX5
NANP
CD8A
ADAMTS18
DDR2
S100A10
SMYD3
FGFR4
BDH1
USP53
POU2F3
SLC24A2
MTRNR2L6
TBCA
MECOM
GLT1D1
APOBEC3D
UBAP2
SH3BGR
ITGB6
PBX2
KIT
GPSM3
ARHGAP28
TEN1
BLOC1S6
ACOX1
MSMB
PHLDB2
AIRE
MYCL
CFC1
TRIP10
GPR108
APOBEC3F
RBP5
CLSTN3
AFF3
ZNF540
HNF4A
GPT2
CHL1
CCDC192
ADGB
TBX3
OCLN
PIPOX
DIAPH3
MTRNR2L9
SBF1
ZIC2
CCDC60
TP53INP1
PTAFR
ANKFN1
TMEM14B
NAA60
GSTT2B
GSTT2
DDTL
DDT
PCK2
NRL
PPP1R21
APOBEC3G
ATL2
HRK
SNX18
RPRM
STK40
UNC50
SFXN1
SERINC3
COA5
NPM3
FGF8
GTPBP6
SKAP1
ACHE
IGFBPL1
GPR37
FOXO3
MYC
ZNF732
CHD2
PARL
STK33
SALL4
RADIL
GREM2
GJB5
ABCB11
SLC37A4
IL12B
BAG3
ZSCAN22
STAG1
EHHADH
ANKFY1
ELMO1
VDAC1
BOD1L2
AGPS
NUF2
SMIM8
CCNG1
ERGIC1
CTF1
BCL7C
ABLIM1
KRAS
ZNF610
TNC
SFRP1
PALB2
DCTN5
LIFR
PHC2
ZBTB25
ZBTB1
TMCC3
CELF1
UACA
ACOXL
WIPI1
SOAT1
PTGR1
DTNB
SOWAHC
SEPTIN10
HACD2
GPM6B
COMMD2
CEBPB
TRIM2
LOXL4
GNG10
GBP4
TIAM1
MAGI3
LRIG3
GAS2L1
CROCC2
CPE
ATF3
CRYGB
IVNS1ABP
SYNPO2L
ADM
ZSWIM3
TVP23C
FGFR2
ACOT8
DST
TMEM14A
MACC1
HYI
FDXACB1
C11orf1
NEDD9
SNTB1
PKP4
FZD8
DICER1
CCDC148
ZNF148
METTL11B
SCOC
TPM1
GSC
ENPEP
GUCA2A
UROD
HECTD3
SELENOT
RTL10
PLCG2
GNB1L
FBRS
C5orf63
MYO16
CLTA
CCDC182
XPA
CFC1B
TFRC
ADAMTS8
SUCLG1
PELI1
EPHB3
ENTPD4
LOC107986453
MCCC1
GSTA1
PGPEP1
PRDM1
HNRNPA2B1
CBX3
NDUFB7
SPACA6
MSX2
PRAG1
NDST4
DDX58
DAAM1
ZBTB8A
RNF130
MATN3
JAM2
FAM83F
RDH13
ZSWIM6
RNF208
KLHL4
TRIB1
NEDD4L
PDK1
LHX1
SPAAR
CHIA
CDH8
TIPARP
ZNF76
ZNF438
EYA2
SGK3
MYBPH
RAD54L2
SLITRK2
CYP2A6
PLAUR
SETBP1
CRTAM
PTPRD
WDR6
SLC25A51
GRM3
BMP7
RASGRP3
BAMBI
RASSF10
CLVS2
DUX4
SKIL
SMAD7
PRKAB2
CHD1L
SIRT1
TBC1D1
FRG2C
BIRC7
FRG2
LURAP1L
SERPINE1
MAN1A2
TGIF1
RBPJ
TUBG1
RETREG3
IL20
KLHL31
MMP20
LIMS1
F2
TEX45
ERCC1
TNIP1
DLX3
RNF103
COL7A1
SULT1C4
KDM6B
PDLIM7
SERPINE2
VAC14
AGAP3
TMEM268
LMNA
OLFM2
GAD1
GSDMD
DISP1
LRRC61
LAMB3
TNFRSF12A
CLDN6
GAB1
ANKRD34B
FSTL3
MYO6
CASZ1
MIS18BP1
NDE1
MARF1
THOC6
HCFC1R1
OTUD7B
ARHGAP22
SLC8A1
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ME3
CDK5RAP2
ANXA8L1
PPP3R1
MTIF2
HCAR3
THEM4
PPP1R12B
DNAJB5
PPP1R13L
POLR1G
ECHDC3
CLDN14
ICAM2
GIP
C15orf39
BCL10
INSYN2A
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
FNIP2
AADAT
TMEM95
KCTD11
METTL17
SMG9
RICTOR
KTN1
CCPG1
C15orf65
TMEM263
KDSR
TYRP1
PAX6
GPR63
FAM172A
NFKBIL1
ATP6V1G2
MYADM
TGM4
LIMK1
FMN1
DNAJB1
SEC31A
SNX25
RARA
STMN3
DACH1
EP400
BCAT1
MCTP1
H4C5
TMEM229B
ANK2
MMP10
CCDC33
PSMD2
CENPA
CTCF
PDGFB
PEDS1-UBE2V1
PEDS1
FHL2
DSP
PLCXD3
PIWIL4
GNB2
RBM27
SCD
ALDH1B1
PELO
ITGA1
DDAH1
CCN1
AMPD1
TNRC6B
EPB41
ZNF341
EPS15
SREBF1
CHRNA9
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
TMTC4
XRN2
B3GNT6
E2F3
JMJD1C
FLRT2
MYL10
ZNF571
DHRS3
MS4A10
RILP
LIMK2
STOX2
KAT5
DERL3
AGO1
ALDH18A1
KANK1
TAGLN2
ITPKC
COQ8B
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CXCR5
BMF
ABCC3
UAP1
SRSF10
OAZ1
MACO1
LRRC2
TRIOBP
RRM1
VPS28
CGB5
CGB1
CCDC88A
WBP1L
GLIPR1L1
CAPS2
ANKLE2
HOPX
KLHL5
FDFT1
PSD3
NUP153
DVL1
TMCO2
GADD45B
ZBTB4
SLC35G6
POLR2A
CLIP3
TMPRSS11D
SLC2A2
BRAP
ACAD10
BEST3
SLC25A25
NAIF1
INPP4B
HOATZ
BTG4
ARSI
UPK3BL2
FST
CABP7
UBR5
ARHGEF18
LTBP1
BMPR2
CGB8
SERTAD4
SARAF
WDR36
CLTB
MTHFD1L
BET1
SIAH1
NFIC
CLCF1
WARS2
CHST3
LAMC2
DCAF10
CDCA4
MFNG
H2BC11
H2AC11
FPR3
SLC35F2
ILKAP
BACE1
UTP18
MBTD1
ZFR
PRSS53
USPL1
HMGB1
USP30
OSGIN2
KMT2A
AHCYL1
SLAIN1
SLC39A13
LRRC37A3
MTNR1A
ZNF592
HAUS7
PTPRB
KLF10
CTNNB1
CPNE2
C11orf42
RFTN1
CALM1
TFPI
PSKH1
MBD1
FAM118A
H2BC21
H2AC21
H2AC20
VWA5B2
ZNRF3
DRAP1
C11orf68
PLEK2
GTF2A1
RGPD8
RGPD5
P3H2
MYOZ2
ZNF609
NUMB
C1QTNF7
OCA2
SERPINB8
ITPRIP
NSMCE1
LUC7L2
FMC1-LUC7L2
FMC1
MINPP1
LEMD3
NOL4L
LOC100287896
LIPT2
DNAJB4
CHST11
RHOD
CSF2RB
ANXA8
SLC6A15
PANK2
KLRD1
LOC389199
SERINC2
LPCAT3
BRIX1
CNOT1
SPON2
MACIR
RUNX1
GATAD1
SLC46A3
TBXAS1
KAT6A
C1orf100
SRSF6
B4GALT6
RNF223
CDKN2AIP
SP4
PGK1
CDKN1A
POU5F1
NDEL1
SHISAL1
CPT2
ASB2
ZNF655
MARCHF5
CPEB3
AXL
ABTB2
SLC39A7
RXRB
RING1
HSD17B8
CKAP2
NOS1AP
CTPS1
ARHGDIA
NPAS4
MAP2K3
PRMT5
ST3GAL2
OBSCN
MCM7
AP4M1
PHF19
UBE2B
H2AZ1
DNAJB14
CDKL3
WDR74
IL17B
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
LENG8
TMED8
SAMD15
ZZZ3
SPTBN1
GADD45G
FSCN1
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
IFI35
DUSP1
ASB8
POLD4
S100A2
KRT80
LOX
C5orf46
SMIM35
PPP6R1
SIK3
ZNF575
ETHE1
OSM
UHRF1
PIK3CD
BAIAP2
AMPD3
ZBED2
FAM184A
PPP1CB
NOTCH3
AKIRIN2
STX1A
GOLGA6D
FCHSD2
SPDYE1
MYOM3
ARHGAP24
WWC2
VOPP1
TADA1
CABLES1
FOXJ3
CXADR
BLOC1S2
NARF
JCAD
BHLHE40
VDAC2
LBH
CCN2
ZNF460
AMHR2
DYRK2
NSMCE4A
KRTAP21-3
CLTC
MAP3K2
LRP12
SLC2A14
PRRT2
PAGR1
MAZ
MATN2
KCNK9
HS3ST2
GLIS3
CALD1
PLXDC2
KANK4
FAT4
UQCRB
HSP90AB1
ETAA1
GTF2B
ZNF720
NOCT
MAPK13
IL6
GPR37L1
LRP6
AFF1
POU2F2
PALD1
MARCHF10
MAP3K9
UPK3BL1
FBXL7
BCL11A
CGB3
KLF4
CALM2
SFT2D3
GJB4
COL16A1
TENM3
SETD6
MLLT11
CDC42SE1
OVCA2
RRNAD1
NTMT1
ISG20L2
IFRD2
EPB42
TUSC1
CCDC200
SGK1
REV3L
PXN
SCG2
CEMIP
WNT3
TEX46
KRTAP4-2
KRTAP4-1
EOMES
CMYA5
ALDH7A1
TES
IL34
MRI1
HEXB
CDHR2
CPD
RET
PAWR
AQP3
PLEC
KANSL1L
GOLGA6A
PITPNM3
TMEM107
INPP5A
MTMR11
SCNN1A
PCIF1
NUP214
LTBR
FOXS1
STK10
MTFP1
EIF4E
CXCR4
CDH15
SUPT6H
SDF2
FAM20C
ANK3
BEGAIN
PURA
PLEKHA7
TUBB
SLC38A9
SHKBP1
MDC1
PRDM10
CSGALNACT2
ATF7-NPFF
ATF7
ZNF354A
MAMDC2
PRDX1
ERRFI1
SLC25A45
FRMD8
EXT1
MUC3A
MED23
TXK
TTLL2
BCAR1
RNF11
AGBL2
H2AX
CCT5
ATPSCKMT
PRICKLE1
KCNJ16
CCNI
PALM2AKAP2
ZSWIM4
ZNF641
HRG
ZFAND2A
DOCK9
COL3A1
H4C11
PPP2R2A
NDUFS8
IGF1
UQCRC1
DAB2
SRSF7
MTF2
H1-2
GRAMD4
ZC3H6
KCNK3
DSTYK
ABHD17C
TTLL8
SLC7A2
TCF7
PRC1
LONP2