ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX064483 | hESC H9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◣ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

PMEPA1
NODAL
PITX2
ZNF664-RFLNA
ZNF664
CCDC92
SLC7A5
ID2
LEFTY2
NPM3
FGF8
PRKAB2
CHD1L
CAV1
SNX18
STOX2
COPS8
PLAGL1
SKIL
ZNF148
ID1
LEFTY1
SLC6A15
AGO1
SMAD7
POU5F1
FBRS
MTRNR2L2
MSH3
DHFR
CNOT3
NEURL1B
BMPR2
SPACA6
GAS2L1
STAM2
BCL11A
NPFFR2
MDN1
CEMIP
WNT3
EOMES
ALDH7A1
MRI1
MTRNR2L8
SUPT6H
SDF2
FAM20C
ASIC1
OLFM2
KLF10
SMAD3
MUC3A
CHST11
ZSWIM4
PPP2R2A
FAM178B
POU2F3
ETS1
LARS2
SETD1B
BUD13
NPAS4
ZNF853
ZSWIM7
TTC19
DPPA4
NOCT
SREBF1
RNF32
LRRC37A3
KAT6A
NEDD4L
FOXJ3
GALNT9
NOTCH3
MAP7
LDLRAD4
DRAP1
C11orf68
LRP6
GAD1
MTIF2
CALD1
MLLT11
CDC42SE1
FAM184A
MTRNR2L1
MARCHF3
ADAMTS5
OCA2
CD8A
NUF2
GRIK2
MMP9
ATP9B
MARCHF5
CPEB3
HOXB13
CER1
RCBTB2
TAF13
CHD2
GTPBP6
JMJD1C
GAB1
DST
CYB561
DCAF10
EP400
USPL1
HMGB1
MTHFD1L
ESRP1
GNL2
RPRM
CCDC88A
NOTCH2NLC
GNB2
MRPS36
LMLN2
ABLIM1
UTS2B
CCDC50
BAMBI
PTGS2
CD101
PCK2
NRL
TBC1D5
UAP1
RET
WT1
ANKRD46
FRG2
HDGF
SMAP1
NSUN6
MIPOL1
E2F3
SNX14
PMAIP1
NTM
EML1
RAPH1
PCCA
AFF1
TFAP2A
TBX22
PLPPR3
RGPD8
RGPD5
RGPD6
BOD1L1
PNMA1
CGB3
LRRC59
LHB
WWC2
MAML3
ID3
OAZ1
TEAD4
PTPN18
NARF
WDFY1
PCDHAC1
GRM1
GIT1
CYBC1
ANKRD13B
ZNF609
DNAJC6
ARL4A
C3orf52
SLC20A1
SMIM8
ZFYVE16
KANSL1L
VANGL2
COPS7B
ERCC1
DGAT2
RAB23
BAZ2A
ATXN7L2
ZNF521
GPR180
P2RY2
SHISA8
NCOA3
FAM168A
IKZF5
ACADSB
HTR5A
HINT3
FEM1C
USP47
RCAN3
TRDMT1
NFIA
KIF2C
FBXL12
ASCC3
ZC3H7B
RANGAP1
LEMD3
LOC100287896
LIPT2
LSM14A
SRF
MARCHF4
JDP2
FAM162A
CCDC58
C4orf36
RNF213
OR1E3
ROR2
XKR7
SOWAHC
SEPTIN10
SLCO5A1
USP15
POLE3
KHK
C9orf43
AMOTL1
MTRNR2L9
PARL
OCIAD2
XPO5
TSPAN12
POLH
EPN1
PPT1
GTF2H2C_2
GTF2H2
REEP5
C1GALT1C1L
GADD45G
LHX1
FAT1
FDXACB1
C11orf1
SAR1B
MAST4
ZNF775
SLC4A9
REST
PMF1-BGLAP
PMF1
C9orf40
LPCAT3
PRC1
MTDH
KDM5B
BMF
LRP12
SYNJ1
RRP8
MRPL39
ILK
TMEM121B
MFAP3L
FAM227B
DTWD1
TLE1
SMPD4
MZT2B
BCL6
ANKRD18A
RNF103
USP37
TULP4
IFT52
CNOT9
NRSN1
IQSEC3
ERLEC1
ASB3
OR8B3
GGT7
E2F2
ACSS2
ARHGAP28
ZNF839
TLCD5
MMP24OS
MMP24-AS1-EDEM2
MCOLN1
LRAT
IGF2BP3
TTC39B
ZNF341
ZBTB45
TNPO1
PICK1
NMRAL1
HMOX2
FRA10AC1
EIF2B2
CHST13
RFESD
PIGO
NCOA5
MEX3B
CCNH
BAIAP2L2
BCAP31
ABCD1
GLRA3
CDKN2AIPNL
AVPR1B
AQP2
AGO3
RNF11
PTBP2
CRBN
BPTF
TMEM250
SHF
LTF
CEMIP2
SLC1A1
HEXB
CDH15
MOB4
PXK
MNAT1
CPVL
CHN2
TNFRSF12A
CLDN6
UGT1A3
TCEAL8
NAV2
LOC728392
TMEM215
RTN4
RNF6
ERMP1
CXCR5
SLC44A1
DCP1A
NCOR2
SCOC
ACSL3
RWDD1
PCBP1
MRGPRG
LRCH1
KLHL18
KIF9
GRID2
EXD1
CPNE4
CHP1
CTNNB1
TBPL1
GARS1
DDIT4
CASP3
MYO6
WBP1L
USP42
UBE2D2
TPI1
ZNF395
ZNF197
SPSB2
EXOC2
ERI1
COL26A1
CBWD5
CBWD3
CAMSAP2
TMEM132A
STX16
PDE1C
LAYN
GRM2
CCNL1
SPATA18
POLR3E
KIAA1841
BCR
MRPL2
KLC4
SOCS2
OXTR
AK3
BRIX1
FGF1
ROR1
USP53
RPGR
PPIH
PDE4B
OPRM1
MANEA
FOSL2
TCF7L1
FXR1
ERBIN
CECR2
ARHGAP26
TUBB
MDC1
ZDHHC23
ZCWPW2
SMIM10L1
RFX4
PRH1-TAS2R14
NUDT2
FNBP1L
AZI2
VPS28
GLIPR1L1
CAPS2
HSP90AB1
ELMO1
XYLB
SEC22A
OAZ3
HTR1E
CERCAM
LAMC2
HMGN2
ZNHIT3
NTSR2
NPIPB9
NFE2L3
KLF17
BICD1
ZNF641
NDRG2
OSBP2
HECTD1
GTF2H2C
GDF7
ARHGEF40
AAR2
UBA1
PIK3R3
MRPL38
VCAN
GABRG3
HEXIM2
TMEM170A
TFAP2D
SLC24A1
NGFR
MRM3
ITGB1
INTS14
GLOD4
AKAP12
GADD45B
ZNF354A
KBTBD2
ST6GAL1
PDE8A
NMNAT2
HDAC2
EYA3
CFAP161
C12orf73
DESI2
FABP6
NPIPB6
NCBP3
MAP2K1
LIG4
HEY2
EIF4G1
CDC42EP3
B3GLCT
ATP23
ABHD13
BHLHE40
EFHD1
CPLX2
PRDX1
TTC9
HERPUD2
ZNF385A
ZFHX3
ULK2
NANOG
MSRB2
MEIG1
MAPK15
KATNA1
IFNGR1
HABP4
FAM120B
ELK4
DNAJC10
DLL1
CCPG1
C15orf65
ZNF654
WNT5A
KSR1
GNAI2
CGGBP1
PRMT5
UCHL1
PRMT9
PHIP
NUDCD3
NIT2
KIFC3
FCHO2
VDAC1
ATAD2
SOX12
PLEKHM3
PDE8B
NXPE3
NLGN1
NAALAD2
MLLT6
KCNH5
GGH
FYN
CCDC107
CBWD6
AMFR
MCM7
AP4M1
ZNF165
SEC62
TMX3
OR6J1
METTL2A
FGF19
CCDC102B
C12orf42
AKAP9
LIMK2
MED23
USP22
TUT7
SDHA
RIPK4
PRDM8
PET117
MTARC2
KAT14
DHRS13
CYP2R1
CHIC2
CDK6
CCDC127
C16orf92
DHRS3
ARL6IP1
THAP4
GNAS
IQCH
EPCAM
BTC
ATG4B
AAGAB
UBE2B
CDKL3
TRIM9
SLC35E2B
RUSC2
RMDN2
NOTCH2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MTF2
ZC3H6
GTF3C3
SETD7
MDFIC
L1TD1
HIVEP2
CYP26B1
BAIAP2
CLTC
ZNF860
ZNF419
XRRA1
TGFA
SPCS2
PRUNE2
PRKAA1
OSBPL10
MKX
FAM151B
EXOC6B
ANKK1
CCNI
RUBCN
LRRC37B
FYTTD1
DMRTA1
AMPH
CDC37L1
SLC39A6
SLC34A3
SALL2
RNF224
GPC6
CYSRT1
GATAD2B
UCHL5
TEKT3
RO60
MBOAT2
INKA1
CDHR4
TMEM242
FAM222B
ZNF48
SYN2
TOR2A
RTKN2
PROSER1
PPARGC1A
PHTF1
PABPC5
NHLRC3
ANKRD12
TEFM
TBL1XR1
STX18
RIMBP2
PLCH1
NRSN2
FAM177A1
COL23A1
ATP5MPL
GNAL
TRIAP1
RBM15B
PDE4DIP
MMP2
PLK3
DSTYK
PARK7
TPD52
SKA3
RPTOR
MRPL57
KLHL23
FGFBP3
DNAJC3
IL20
RAD54L2
PHACTR2
FILIP1L
TMEM267
SPEF2
SFRP2
NDUFS3
KBTBD4
IQCF2
HES1
FAM153B
DCP1B
ADAMTS3
RBPJ
TAF12
SPAST
SLC44A2
SLC30A5
NLE1
DNAJC19
CYP2U1
CCDC71L
ANKRD50
UROD
HECTD3
SPOP
SLC35A3
NOTCH2NLA
MTMR6
METTL9
LLPH
FAM98B
DYRK3
C8orf37
TMEM263
SUMF2
SOWAHA
FAM221A
EXD2
EPHA1
EEF1AKMT1
EBAG9
CALB1
ASAP3
AFF4
DUX4
KTN1
STMN3
SNAPC5
SIK2
RTEL1
NKX1-1
NFKBIA
MAP3K4
FAM107A
BORCS6
ADNP
PURA
TIPARP
HNRNPR
HCN1
GALNT15
BLMH
AMN1
KDM6B
CALM2
TMEM37
STEAP3
PAK1
NAA40
KANSL3
HTR7
GNG3
FUT1
FGF21
FER1L5
CRYBG1
CNTN4
CDKN2A
CCDC69
BSCL2
ATAD2B
AFG3L2
ARIH1
SST
SLC2A9
SEPSECS
NAT8L
KRT82
KCNQ3
DDHD1
PAWR
RBMS1
MND1
FUT8
TGIF1
PPP1R13L
POLR1G
AMOTL2
NR1H3
ACP2
MUC12
LYRM1
KCNH1
DLX6
DCUN1D3
C15orf40
RCOR2
INTS12
HIPK1
GSTCD
GAREM1
FKBP5
CTSL
CRYAA
CRYAA2
ARMC12
VDAC2
CCN2
SERPING1
RNF166
CTU2
AIFM3
LONP2
ABCC11
RCL1
SNTG1
SEMA6A
PLCL2
PLAAT1
PAFAH1B2
NOTCH2NLB
METTL2B
FAM83B
ARID2
TSKU
VGLL3
SSBP2
STK17A
VPS18
TPTEP2-CSNK1E
TPK1
TJP3
THOC2
SYDE2
SEC11A
MRPL40
HIRA
GEMIN4
GAD2
CCKBR
BEST4
B3GALT1
AS3MT
HNRNPA2B1
CBX3
SLC35E1
TTC14
POT1
MEF2A
MAP2
KCNN2
FBXO10
EIF3A
CHST15
BAZ2B
HS3ST2
MRTFA
STK32C
LRRC27
FOXN3
CNTNAP3
CACHD1
AP3B1
CALM1
HNRNPD
UBN2
PKN2
IL11
MAT2A
ZBTB2
UAP1L1
TAP1
SPAG1
PSMB9
NCKAP1
MPHOSPH8
CCDC59
CABIN1
ADAMTS18
ADRA1B
ELF2
ZNF846
ZDHHC1
TTC23L
TRMT6
TCF12
RBP1
RBM47
PTPN4
MCM8
FERMT2
ASB13
ARL5A
TMTC4
SYT14
ACOT7
TTLL7
TCTE3
PDLIM5
LSM5
GCLM
FOSL1
ERMARD
BHLHE41
AVL9
IPO13
PSMF1
NSUN7
HES6
DHRS4L2
DHRS4
CARNMT1
SNX25
RRM1
TFPI
MECOM
NUAK1
SMPDL3A
RB1
RANBP2
FBXO22
DTD2
ATXN2L
ARHGEF1
PCID2
CUL4A
USP3
STXBP5L
HBS1L
FRMPD1
CD99L2
CKAP2
LDHA
VPS36
SNTG2
RWDD2A
RAB11FIP3
PGM3
OR2T1
MB21D2
MAP4K5
KANSL1
FZD1
ATL1
USP30
AGPS
POLD4
THRB
TATDN2
SPRYD7
LDLRAD1
GPHN
C8orf88
IFRD2
ACOXL
SPATC1L
KIF21A
HECTD2
FBP1
IL17RA
TCF4
RBIS
CORO2A
BARD1
IKZF3
ZPBP2
TRAPPC11
SLC35G4
RWDD4
MMUT
FGF9
COMMD8
CENPQ
JAM2
SOX14
ELAVL2
OTUD7B
ZSCAN22
SUGCT
ORC5
MPLKIP
LOC101928764
KCTD18
LIMS1
GBA
LOC107986453
ZCCHC18
SSH2
PRLHR
PIK3C2B
PATZ1
EFCAB5
SRSF7
YARS1
TLCD4-RWDD3
TLCD4
S100PBP
PSIP1
PIGH
OTUD4
FAM174B
DUSP6
NUP153
UQCRC1
SRSF5
ZNF280C
WTAP
SUPV3L1
SOD2
SDE2
KATNIP
GTF3C1
GALNT3
EFCAB14
COG2
ZNF594
MKS1
IPP
FGD4
DENND4B
TIMP4
PRSS16
NCR3LG1
LNPEP
KRBA2
FEZ2
ATR
ASAH1
NOS3
FGFR4
URB2
TAF5L
SIDT2
GPR88