ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702097 | hESC derived mesendodermal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◣ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◢ SRX366173: NCI-H441

◢ SMAD4: STRING

WDR74
ZBTB4
SLC35G6
POLR2A
TMEM107
POLDIP3
TRPC1
HEXIM1
C12orf65
ZNF143
GTF2A1
DNAJA1
APTX
NUDT15
SLC38A2
MCL1
BTG1
HSP90AB1
KDM4A
PARP2
H4C3
H1-6
RPLP0
SRSF7
EIF4G2
PCIF1
ID4
EIF2AK3
DNAJB1
C6orf62
RPL5
FUS
NARF
SRSF3
PABPC1
GLUL
LRCH4
HERPUD1
FBXO24
ZBTB37
STX10
IER2
GSK3B
H4C11
TGOLN2
HNRNPH1
SPTAN1
CIRBP
PRDX1
H3C6
H1-2
CSRNP2
CALM1
KANSL2
CSKMT
C11orf98
MRPL35
IMMT
CCN2
TRA2B
CLSPN
PNRC2
SRSF5
TRAF7
RPL3
TMBIM6
UBE2S
SIRT4
KNTC1
OAZ1
HNRNPA2B1
CBX3
MKNK2
MYLIP
FOS
ARL15
SNRNP70
VCL
AFF1
FSCN1
NAGK
JUNB
ARF4
ANKRD17
DDAH1
CCN1
SETD5
RPL13A
DUSP1
SESN2
MICU2
ZFAND5
VPS26C
SECISBP2
RPS12
POLR3D
HSPA5
TTI2
FAM168B
RPL12
PRKRA
PJVK
LRSAM1
JPT1
HSPA1B
CYTH2
SRSF6
DENND6A
DDX5
IER5L
FAM53C
CDC25C
KDSR
MTHFD2
H2AX
SRSF2
MFSD11
UNK
H3-3B
TOB1
SFPQ
HEATR5A
CSE1L
ADAMTS1
UBE2Z
ZNFX1
UBC
PFKFB3
NXF1
ZNF529
TUFT1
ACTL6A
IER5
FARSA
CALR
HEXIM2
SOCS1
ARL6IP1
SKP1
TRA2A
MAT2B
NDRG1
DDX59
COQ10B
ID2
VAMP1
ZCWPW1
RPLP1
MEPCE
DNAJC25-GNG10
DNAJC25
CTNNB1
JUND
TAF8
MRPS18B
CCND3
TMEM18
H2AZ1
DNAJB14
USP42
SREK1
NUDCD1
KRT19
UBR4
TMEM258
PTPN6
NASP
FEN1
C12orf57
KMT2E
L3HYPDH
JKAMP
S100A13
CHTOP
H4C12
RPS2
RNF151
MAK16
EEF1A1
DDX1
SIRT1
KLF7
TNFAIP1
IFT20
HNRNPC
BRD2
ARRDC3
UBB
TJP1
SDCBP
KAT7
EEF2
ZNF207
TAF1D
TAF15
MDP1
CHMP4A
C11orf54
OAT
MAPK1IP1L
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CLTC
LUC7L
DHPS
CALM2
SLC39A10
NABP1
MBD6
JUN
IFRD1
DDIT3
AMD1
USPL1
HMGB1
MORF4L1
KIF27
KANK1
GADD45B
RHOB
MAT2A
UBE2D3
HDAC4
RBM14-RBM4
RBM14
ZNF524
TM2D1
PDIA3
LGMN
FIZ1
TMSB4X
ZSCAN31
PGAP2
RPS20
EIF4A2
WDR1
TAX1BP3
EMC6
EMSY
FAM3C
BAIAP2
WSB1
LBH
GNAS
ZNF248
PPIA
POR
PITRM1
RRBP1
SLC3A2
SEPTIN2
INTS6
HDLBP
H3C12
H2BC17
H2AC17
H1-10
CENPBD1
BAMBI
H2BC21
H2AC21
H2AC20
FTL
ING1
CYP20A1
RPS27
RAB13
C5orf24
USP48
PPIL3
NIF3L1
CENPC
ATF4
MEX3D
HSPA8
FER
DNAJB5
PARK7
SMIM14
GPR89B
STK17A
LIMS1
GADD45G
TMEM242
RBM7
CREBZF
C11orf71
ACTB
FN1
GAPDH
PCNA
YWHAQ
TUBB4B
SERTAD2
H2BC15
H2AC15
SLC35C2
PLAG1
CHCHD7
TNRC6B
ARIH1
AMOTL2
YTHDC1
PLK2
H4C2
H3C2
H2AC4
GTPBP8
EIF5
ARSD
RBM12
LUZP1
CPNE1
BBC3
SARAF
UBAP2
CBX5
WAC
PPP1R15A
PLEKHA4
HNRNPA1
ARHGEF7
ZNF326
STMN1
LUC7L3
ISCA1
EIF1
ATXN7L2
TSC22D1
THAP5
P4HA1
HNRNPAB
DNAJB9
AKIRIN2
RCC1
IL6ST
H2BC8
H2AC8
JMJD1C
TSPYL2
TMEM263
MAP3K2
RUSF1
SLC7A5
ERRFI1
TPI1
SDHAF2
CPSF7
ARHGAP35
UAP1
UHRF1BP1L
CAMSAP2
PIK3R3
ZNF24
SLC16A1
RBM25
MPP5
FRS2
FAM200B
EHD1
DDX50
FDXACB1
C11orf1
ZC3H10
TP53BP2
RPL41
NREP
FEM1C
PTPN14
POMZP3
KIF5B
DAB2
ACSL3
HNRNPA0
CELSR3
NFKBIZ
CCNG1
SPTSSA
PAIP2
GPATCH3
ARHGAP19
H2BC11
H2AC11
S100A1
CNN3
H4C4
H2BC12
H2AC12
CDK12
CCT2
DESI2
USO1
CCNT2
C19orf48
MMADHC
H2BC5
H1-4
IVNS1ABP
TUBA1C
USP40
DUX4
POLR2J3
PDCD4
AZIN1
MRTFA
HMGA1
ZC3H6
NBEAL1
MATR3
CCNB2
NDEL1
ATL2
HMGN2
SLX1B
SLX1A
NFYC
ETNK1
BOLA2-SMG1P6
BOLA2B
BOLA2
ZNF766
PIK3C2A
KLHDC2
ABI2
TXNRD1
TMSB10
SFR1
SLC36A4
SLTM
H4C5
SLC20A1
TSC22D2
VIM
PHACTR2
TPT1
HNRNPDL
ENOPH1
ID1
SDCBP2
MKLN1
CLU
KRT8
XBP1
RPS6
EXT1
LSM14A
ZNF518A
RPN1
RNF220
ITFG2
ELMOD2
MTRNR2L1
PMEPA1
SKIL
LAPTM4B
SMAD7
PRKAB2
CHD1L
MTRNR2L2
MSH3
DHFR
TBC1D1
FRG2C
COPS8
BIRC7
FRG2
LURAP1L
SERPINE1
MAN1A2
TGIF1
RBPJ
TUBG1
RETREG3
IL20
MTRNR2L8
KLHL31
MMP20
F2
TEX45
ERCC1
TNIP1
DLX3
RNF103
COL7A1
SPACA6
SULT1C4
KDM6B
PDLIM7
SERPINE2
FBRS
VAC14
PITX2
NODAL
AGAP3
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
LMNA
ZNF148
DIAPH3
OLFM2
GAD1
GSDMD
DISP1
ID3
LRRC61
LAMB3
TNFRSF12A
CLDN6
GAB1
TRIB1
PHLDB2
SMYD3
ANKRD34B
FSTL3
TTC39B
MYO6
RASGRP3
CASZ1
MIS18BP1
NDE1
MARF1
THOC6
HCFC1R1
OTUD7B
SMAD3
ARHGAP22
SLC8A1
CMTM6
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
CST6
CDK5RAP2
ANXA8L1
PPP3R1
MTIF2
HCAR3
THEM4
PPP1R12B
PPP1R13L
POLR1G
ECHDC3
CLDN14
LEFTY2
ICAM2
GIP
C15orf39
BCL10
INSYN2A
BRD7
YPEL5
EPB41L1
STAM2
TOGARAM1
KLHL28
FNIP2
HDGF
ABLIM1
AADAT
TMEM95
KCTD11
METTL17
SMG9
RICTOR
KTN1
CCPG1
C15orf65
TYRP1
PAX6
GPR63
LEFTY1
FAM172A
NFKBIL1
ATP6V1G2
MYADM
GID4
ATPAF2
TGM4
LIMK1
FMN1
SEC31A
SNX25
RARA
TSKU
STMN3
SMARCD3
ALOX5AP
ZNF540
DACH1
EP400
BCAT1
MCTP1
TMEM229B
ANK2
MMP10
CCDC33
PSMD2
CENPA
CTCF
PDGFB
PEDS1-UBE2V1
PEDS1
FHL2
DSP
PLCXD3
PIWIL4
GNB2
RBM27
SCD
ALDH1B1
PELO
ITGA1
AMPD1
EPB41
SSBP3
ZNF341
CAV1
PLAGL1
EPS15
CSRNP1
NPM3
FGF8
ASIC1
SREBF1
CHRNA9
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
TMTC4
XRN2
B3GNT6
PLK3
E2F3
FGF17
NEURL1B
FLRT2
DGAT2
SNX18
MYL10
ZNF571
DHRS3
MS4A10
RILP
LIMK2
STOX2
KAT5
DERL3
AGO1
ALDH18A1
TAGLN2
ITPKC
COQ8B
PLS1
TECR
PLAU
MRPL2
MOXD1
KLC4
CXCR5
BMF
ABCC3
USP2
SRSF10
MACO1
LRRC2
TRIOBP
RRM1
VPS28
CGB5
CGB1
CEP55
CCDC88A
WBP1L
GLIPR1L1
CAPS2
ANKLE2
NPFFR2
HOPX
KLHL5
EPSTI1
FDFT1
PSD3
NUP153
DVL1
TMCO2
CLIP3
MYBPH
TMPRSS11D
SLC2A2
BRAP
ACAD10
BEST3
SLC25A25
NAIF1
INPP4B
HOATZ
BTG4
ARSI
UPK3BL2
FST
CABP7
UBR5
ARHGEF18
LTBP1
BMPR2
CGB8
ACOX3
SERTAD4
CER1
WDR36
CLTB
MTHFD1L
BET1
SIAH1
NFIC
CLCF1
DENND2B
WARS2
CHST3
ELAPOR2
LAMC2
DCAF10
CDCA4
MFNG
AGFG2
FPR3
SLC35F2
ILKAP
BACE1
UTP18
MBTD1
ZFR
PRSS53
USP30
OSGIN2
KMT2A
AHCYL1
SLAIN1
MDN1
SLC39A13
LRRC37A3
MTNR1A
ZNF592
HAUS7
PTPRB
KLF10
CPNE2
C11orf42
RFTN1
TFPI
PSKH1
MBD1
FAM118A
VWA5B2
ZNRF3
DRAP1
C11orf68
PLEK2
GRSF1
RGPD8
RGPD5
P3H2
MYOZ2
ZNF609
NUMB
C1QTNF7
DECR1
OCA2
SERPINB8
ITPRIP
APC
NSMCE1
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LEMD3
AGPS
NOL4L
LOC100287896
LIPT2
GAS2L1
DNAJB4
CHST11
RHOD
CSF2RB
ANXA8
SLC6A15
PANK2
KLRD1
LOC389199
SERINC2
LPCAT3
BRIX1
VDAC1
WDR54
C2orf81
CNOT1
SPON2
MACIR
RUNX1
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
KAT6A
C1orf100
METTL11B
MINDY3
B4GALT6
RNF223
CDKN2AIP
ZNF792
SP4
PGK1
CDKN1A
POU5F1
SHISAL1
CPT2
ASB2
ZNF655
MARCHF5
CPEB3
AXL
ABTB2
SLC39A7
RXRB
RING1
HSD17B8
CKAP2
POU2F3
EPG5
PHC2
NOS1AP
CTPS1
ARHGDIA
NPAS4
MAP2K3
PRMT5
ST3GAL2
OBSCN
GTPBP6
MCM7
AP4M1
PHF19
UBE2B
CDKL3
IL17B
CNOT3
LAPTM5
SLC1A4
KIFAP3
GOLGA6C
LENG8
FXYD6-FXYD2
FXYD6
TMED8
SAMD15
ZZZ3
SLC36A2
ARMC7
SPTBN1
RAB17
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
IFI35
FGF1
ASB8
POLD4
S100A2
NEDD9
KRT80
LOX
C5orf46
SMIM35
PPP6R1
SIK3
ZNF575
GPR183
ETHE1
OSM
UHRF1
PIK3CD
AMPD3
ZBED2
FAM184A
PPP1CB
NOTCH3
STX1A
KCNF1
GOLGA6D
FCHSD2
SPDYE1
MYOM3
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
CABLES1
ACSS3
FOXJ3
CXADR
BLOC1S2
LRTM1
JCAD
BHLHE40
ETFB
VDAC2
ZNF460
AMHR2
DYRK2
MYOM1
NSMCE4A
KRTAP21-3
BCL11B
LRP12
SLC2A14
PRRT2
PAQR9
PAGR1
MAZ
MATN2
KCNK9
HS3ST2
GLIS3
CALD1
PLXDC2
KANK4
FAT4
UQCRB
ETAA1
GTF2B
ZNF720
NOCT
MAPK13
IL6
GPR37L1
LRP6
POU2F2
PALD1
MARCHF10
MAP3K9
UPK3BL1
FBXL7
BCL11A
CGB3
KLF4
SFT2D3
NUF2
GJB4
COL16A1
CHD2
TENM3
SETD6
MLLT11
CDC42SE1
OVCA2
RRNAD1
NTMT1
ISG20L2
IFRD2
EPB42
TUSC1
DACT2
CCDC200
ROR1
SGK1
REV3L
PXN
SCG2
RPRM
UQCRHL
NEDD4L
CEMIP
WNT3
TEX46
KRTAP4-2
KRTAP4-1
EOMES
CMYA5
CFLAR
ALDH7A1
TES
C2orf74