ChIP-Atlas: Target genes

Potential target genes for SMAD4

Query protein: SMAD4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX366173 | NCI-H441
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SMAD4's Target genes

◢ SMAD4: Average

◢ SRX702096: hESC derived ectodermal cells

◢ SRX064492: hESC derived mesendodermal cells

◢ SRX702093: hESC derived mesendodermal cells

◢ SRX702094: hESC derived mesendodermal cells

◢ SRX702095: hESC derived mesendodermal cells

◢ SRX702097: hESC derived mesendodermal cells

◢ SRX064483: hESC H9

◢ SRX702092: hESC HUES64

◢ SRX6957398: HGrC1

◢ SRX6957399: HGrC1

◢ SRX6957405: HGrC1

◢ SRX6957408: HGrC1

◢ SRX6957409: HGrC1

◢ SRX6957410: HGrC1

◢ SRX6957411: HGrC1

◢ SRX6957485: HGrC1

◢ SRX6957490: HGrC1

◢ SRX6957478: KGN

◢ SRX6957482: KGN

◢ SRX366172: NCI-H441

◣ SRX366173: NCI-H441

◢ SMAD4: STRING

SERPINE1
KDM6B
PMEPA1
COL7A1
GIP
DNAJB5
BIRC7
CST6
ERCC1
SMAD7
MYL10
CGB8
CLTB
CXCR5
LAMB3
B3GNT6
VPS28
PLEK2
TMEM95
KCTD11
RHOD
INPP4B
RNF223
SHISAL1
ASB2
TNIP1
DVL1
LAMC2
ARHGEF18
UPK3BL2
S100A2
SMIM35
CGB5
CGB1
OSM
PIK3CD
MYOM3
CLDN14
BLOC1S2
DHRS3
AMHR2
KCNK9
GLIS3
PALD1
UPK3BL1
SFT2D3
GJB4
MYBPH
CLCF1
MAP2K3
PPP1R13L
POLR1G
AQP3
TRIB1
GOLGA6C
PLEC
GOLGA6A
PITPNM3
MTMR11
ID1
PLEKHA7
LAPTM5
SLC25A45
FRMD8
TTLL2
TNFRSF12A
CLDN6
THOC6
HCFC1R1
GOLGA6D
ZFAND2A
NDUFS8
MTRNR2L8
KCNK3
TTLL8
TCF7
STX1A
FLNC
ANXA8
F13A1
LOC100509620
KPNA7
TAGLN2
INAVA
C5orf46
PIEZO1
HS3ST2
MAPK13
FHL2
NIBAN2
B4GALT2
ATP6V0B
MARCHF10
RRAD
DENR
ITGAE
ANAPC11
ALYREF
TRIM55
PTPRE
LAMA5
ABR
LOC100130520
CD300H
RND1
KANK4
RIMBP3C
RIMBP3B
FZR1
OLFM2
CRCP
ITGA5
ANXA8L1
LBH
H2AW
BMP8B
IL17B
COL16A1
ABCC3
EIF4E
EXT1
NAPRT
MROH6
MLXIP
BEST3
RUNX1
FPR3
EPB41
CTNNA1
QPCT
GOLGA6B
IVL
YOD1
S100P
PFKFB2
NRCAM
SPRR1B
CSF1R
C11orf86
ANKLE2
BCAR1
LOC102724265
LTBP3
TTC6
FOXA1
GRAMD4
CD151
RHOF
ZBTB7B
TFF1
SMAD3
MAP3K9
PDE4C
ACTBL2
NLRX1
CPA4
MYEOV
BMP8A
AGAP1
RBPJ
CDKN1A
ZC3H12A
APOBEC3A_B
APOBEC3A
INPP5A
CCDC197
ZSWIM1
SPATA25
SH3BP4
BOK
OR2AT4
OPRL1
LKAAEAR1
KCNG2
PDLIM7
NECTIN4
MSANTD3
AHNAK2
SHCBP1L
SLC19A2
SCT
FERMT1
CDHR5
PSMD2
NOL4L
ADGRG1
CXXC5
TNFRSF1A
C1QTNF6
TM4SF19
SPINK1
PALLD
SLC49A3
ATXN1
SREBF1
FAP
HTR1D
TMIE
MEAK7
FBLN2
ALS2CL
SMG9
STK40
ADAM19
RABL2B
SREK1IP1
CWC27
CLSTN1
CDC34
CDHR2
CCNI
VGF
MMP10
PAQR9
SYT12
LDOC1
KRT16
ITPRIP
KRT17
HPCAL1
MET
LAMA3
IRF2BP2
CCDC57
ALOX5AP
POU4F2
TIMP2
ATG16L1
FAM131A
NSMCE1
ASB5
SLC39A7
RXRB
RING1
HSD17B8
SLC7A6
HRH1
LOC100287896
LIPT2
FOXS1
NOS3
UPP1
RAB26
PRDM12
CCDC88B
RELA
PITPNM2
CPNE5
IL13RA1
BCL9L
SPACA6
PVR
PHC2
RABL2A
CD248
VASN
POU3F2
GEM
CHST11
UBL4A
SLC10A3
ID2
CGB3
SFTPB
PSG5
ADSS1
TEX46
RCC1
PDE2A
LINGO3
DMPK
CHRM4
VIM
PLA2G2E
PPP1R14B
LOC114841035
FKBP2
ANO1
IL21R
NDST1
MEIOB
MDFI
BCAN
IKZF3
R3HDML
PDE9A
NR1D1
CMIP
C19orf33
ARAP2
KRTAP2-4
DLC1
DRAP1
C11orf68
PIK3IP1
MTFP1
TTC9
SPAG9
GPR68
NPAS4
TRIM29
PCDHGC5
PCDHGC4
GSTA4
CEBPE
IGSF9B
AGXT2
MAMDC2
NYAP1
POLD4
FSCN1
FAM184A
VIP
TRAPPC3
LARP1
C1orf105
ALDH3B1
HSF5
GNAL
USP2
BAIAP2
PROC
MFSD12
KCNQ4
FAM102A
PAWR
CSRNP1
CYP27C1
CACNA1I
GADD45B
FAM180A
CCL20
KRT7
GSN
CLDN4
ATP2A2
VGLL3
SYNRG
GUCA2A
MTRNR2L2
MSH3
DHFR
ZNF165
SLC4A2
PPCDC
CDK5
NOX4
JPT2
ENKUR
ECSCR
PLEKHG3
MICALCL
PRKAB2
CHD1L
RPL24
SRI
MELTF
ITLN2
THAP4
MTMR1
CORO6
KRT79
KCNMA1
CDCA4
GPR31
FAM83A
KIAA0930
TNFRSF11A
RNF126
PSCA
GFRA4
GADD45G
GZF1
LPIN1
EIF1AD
BANF1
RAB24
PRELID1
FURIN
DUSP1
ASCC2
PHYHIP
NPB
RBM27
SLC1A7
MTHFR
EMP2
CLCN6
TSKU
KANK1
MRPL2
KLC4
WDR54
C2orf81
MYH9
SVIL
OR2A42
LEP
KRT80
MEFV
CPEB2
TES
SEPTIN9
CHRNA9
LOC388282
ASAP1
ANKRD1
SCN4A
AQP1
AKR1C2
HGS
ARL16
ANK1
AMZ1
ARHGAP22
TFAP2C
SP140
SP110
GPR39
GLIS2
FAM89B
EHBP1L1
TCTEX1D4
BTBD19
OSBPL7
LSP1
JMJD1C
S100A10
IGFBP3
OR10H5
CITED2
SLCO5A1
XCR1
TMIGD3
SH3BP5L
RAB37
APP
SBF1
PTK2
NPTN
MUC4
KIF5A
DCTN2
CD109
RIN1
FAM107B
MIDEAS
TMEM184A
SMIM29
ITPKC
COQ8B
ACOT7
RALGDS
FSCN3
KRT19
MUC20
FGF1
INF2
SLC35E2A
PCYT2
DLX4
FBRS
MLLT11
CDC42SE1
ROBO4
MUC5AC
ENTPD8
ELFN2
CD55
P2RY2
PRDM11
MT1X
IL6R
ZNF354A
STAM2
IVNS1ABP
AXL
PDZK1IP1
BMF
KRT78
EPS8L2
EMP1
DEAF1
CDV3
PLAU
LIMS2
GPR17
MVP
CFAP65
COPS8
RNF213
LY6K
DYNLT1
ZBTB38
RAPGEF1
PERM1
KDM7A
CEACAM18
ALDH1A3
RAP2B
PKP3
CACNA1B
KRT8
ZNF710
XAGE1B
XAGE1A
TMCC1
FOXP1
VSX1
IGF1
SFN
DCST2
DCST1
MAP3K14
VDR
NPR2
EPPK1
TF
CD63
TPD52
HOXA3
AGAP3
BHLHE40
LRP5
FABP6
ADRA1B
METRNL
PSG2
TUBB6
RASSF5
DBNL
DAGLA
CROCC2
IL15
ARAP1
LPAR3
ADAM8
TRIM62
SPATA12
FNIP2
KLF7
NRARP
LAD1
GTPBP6
SPAAR
SPSB1
DUSP22
CCR7
TRIM2
TMEM145
GLIPR1L1
CAPS2
DDI2
FTL
C2CD2
SMIM32
OCIAD2
SOX18
DUX4
MTRNR2L1
SKIL
LAPTM4B
SIRT1
TBC1D1
FRG2C
FRG2
LURAP1L
MAN1A2
TGIF1
TUBG1
RETREG3
IL20
KLHL31
MMP20
LIMS1
F2
TEX45
DLX3
RNF103
SULT1C4
SLC7A5
SERPINE2
VAC14
PITX2
NODAL
TMEM268
ZNF664-RFLNA
ZNF664
CCDC92
LMNA
ZNF148
DIAPH3
GAD1
GSDMD
DISP1
ID3
LRRC61
GAB1
PHLDB2
SMYD3
ANKRD34B
FSTL3
TTC39B
MYO6
RASGRP3
CASZ1
MIS18BP1
NDE1
MARF1
OTUD7B
SLC8A1
FDXACB1
CMTM6
C11orf1
IKZF5
ACADSB
PRRG2
NOSIP
ROR2
ME3
CDK5RAP2
PPP3R1
MTIF2
HCAR3
THEM4
PPP1R12B
ECHDC3
LEFTY2
ICAM2
C15orf39
BCL10
INSYN2A
BRD7
YPEL5
EPB41L1
TOGARAM1
KLHL28
HDGF
ABLIM1
AADAT
METTL17
RICTOR
KTN1
CCPG1
C15orf65
TMEM263
KDSR
TYRP1
PAX6
GPR63
LEFTY1
FAM172A
NFKBIL1
ATP6V1G2
MYADM
GID4
ATPAF2
TGM4
LIMK1
FMN1
DNAJB1
SEC31A
SNX25
RARA
STMN3
SMARCD3
ZNF540
DACH1
EP400
BCAT1
MCTP1
H4C5
TMEM229B
ANK2
CCDC33
CENPA
CTCF
PDGFB
PEDS1-UBE2V1
PEDS1
DSP
PLCXD3
PIWIL4
GNB2
SCD
ALDH1B1
PELO
ITGA1
DDAH1
CCN1
AMPD1
TNRC6B
SSBP3
ZNF341
CAV1
PLAGL1
EPS15
NPM3
FGF8
ASIC1
PLCXD2
NUDT4B
KCNN3
TLR1
SPATS2L
TMTC4
XRN2
BAMBI
PLK3
E2F3
FGF17
NEURL1B
FLRT2
DGAT2
SNX18
ZNF571
MS4A10
RILP
LIMK2
STOX2
KAT5
DERL3
AGO1
ALDH18A1
PLS1
TECR
MOXD1
UAP1
SRSF10
OAZ1
MACO1
LRRC2
TRIOBP
RRM1
CEP55
CCDC88A
WBP1L
NPFFR2
HOPX
KLHL5
EPSTI1
FDFT1
PSD3
NUP153
TMCO2
ZBTB4
SLC35G6
POLR2A
CLIP3
TMPRSS11D
SLC2A2
BRAP
ACAD10
SLC25A25
NAIF1
HOATZ
BTG4
ARSI
FST
CABP7
UBR5
LTBP1
BMPR2
ACOX3
SERTAD4
SARAF
CER1
WDR36
MTHFD1L
BET1
SIAH1
NFIC
DENND2B
WARS2
CHST3
ELAPOR2
DCAF10
MFNG
AGFG2
H2BC11
H2AC11
SLC35F2
ILKAP
BACE1
UTP18
MBTD1
ZFR
PRSS53
USPL1
HMGB1
USP30
OSGIN2
KMT2A
AHCYL1
SLAIN1
MDN1
SLC39A13
LRRC37A3
MTNR1A
ZNF592
HAUS7
PTPRB
KLF10
CTNNB1
CPNE2
C11orf42
RFTN1
CALM1
TFPI
PSKH1
MBD1
FAM118A
H2BC21
H2AC21
H2AC20
VWA5B2
ZNRF3
GTF2A1
GRSF1
RGPD8
RGPD5
P3H2
MYOZ2
ZNF609
NUMB
C1QTNF7
DECR1
OCA2
SERPINB8
APC
LUC7L2
FMC1-LUC7L2
FMC1
SLC1A1
PRDM1
MINPP1
LEMD3
AGPS
GAS2L1
DNAJB4
CSF2RB
SLC6A15
PANK2
KLRD1
LOC389199
SERINC2
LPCAT3
BRIX1
VDAC1
CNOT1
SPON2
MACIR
SOWAHC
SEPTIN10
GATAD1
SLC46A3
TBXAS1
KAT6A
C1orf100
SRSF6
METTL11B
MINDY3
B4GALT6
CDKN2AIP
ZNF792
SP4
PGK1
POU5F1
NDEL1
CPT2
ZNF655
MARCHF5
CPEB3
ABTB2
CKAP2
POU2F3
EPG5
NOS1AP
CTPS1
ARHGDIA
PRMT5
ST3GAL2
OBSCN
MCM7
AP4M1
PHF19
UBE2B
H2AZ1
DNAJB14
CDKL3
WDR74
CNOT3
SLC1A4
KIFAP3
LENG8
FXYD6-FXYD2
FXYD6
TMED8
SAMD15
ZZZ3
SLC36A2
ARMC7
SPTBN1
RAB17
TRAPPC3L
TBC1D7-LOC100130357
TBC1D7
IFI35
ASB8
NEDD9
LOX
PPP6R1
SIK3
ZNF575
GPR183
ETHE1
UHRF1
AMPD3
ZBED2
PPP1CB
NOTCH3
AKIRIN2
KCNF1
FCHSD2
SPDYE1
ARHGAP24
WWC2
VOPP1
TADA1
CD8A
CABLES1
ACSS3
FOXJ3
CXADR
LRTM1
NARF
JCAD
ETFB
VDAC2
CCN2
ZNF460
DYRK2
MYOM1
NSMCE4A
KRTAP21-3
BCL11B
CLTC
MAP3K2
LRP12
SLC2A14
PRRT2
PAGR1
MAZ
MATN2
HNRNPA2B1
CBX3
CALD1
PLXDC2
FAT4
UQCRB
HSP90AB1
ETAA1
GTF2B
ZNF720
NOCT
IL6
GPR37L1
LRP6
AFF1
POU2F2
FBXL7
BCL11A
KLF4
CALM2
NUF2
CHD2
TENM3
SETD6
OVCA2
RRNAD1
NTMT1
ISG20L2
IFRD2
EPB42
TUSC1
DACT2
CCDC200
ROR1
SGK1
REV3L
PXN
SCG2
RPRM
UQCRHL
NEDD4L
CEMIP
WNT3
KRTAP4-2
KRTAP4-1
EOMES