ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2268291 | Mesenchymal stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◣ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

SELENOT
FRG2C
KRT8
CDCA7L
INO80D
NOL8
CENPP
ZNF219
TMEM253
ZC3H7B
RANGAP1
KCNAB2
PRCC
PAXIP1
FRG2
SLC35E2A
C21orf91
MYL12A
MYL12B
PIK3R3
TIGD5
EEF1D
SETD2
CMC2
CENPN
NEMF
MARK2
FOS
GALNT10
SMIM41
ATG101
SLC35E2B
POR
DGAT2
KRT19
KRT15
PSIP1
SLC5A1
SRI
HDAC2
TJP2
YY1AP1
DAP3
FZR1
DOHH
HBD
HBB
FLCN
ZWILCH
RPL4
SNAPC5
PTDSS1
MTERF3
FBXW4
NAA10
ARHGAP4
PHC2
RITA1
DDX54
RNF169
CCDC22
CACNA1F
FRAT1
GSTP1
FKBP5
AGRN
ISG15
OOEP
UROS
BCCIP
RPN2
MROH8
UPF1
GIT2
ANKRD13A
TMSB10
MED26
TTPAL
ZMYND11
FBXO33
IQCH
AAGAB
MIA2
FRAT2
RPS29
PTX3
NSD3
LETM2
BAG2
PROX2
WDR26
DSE
TSPYL4
LAMC1
CEBPD
TCP11L2
ITGB1
PRPF40A
ARL6IP6
SS18
DCBLD2
SLTM
EBF1
ADAMTS1
CEBPB
TM2D2
ADAM9
HMGA2
ZNF639
ERRFI1
CHMP3
ASAH1
FSTL1
PARK7
HYAL1
TUSC2
HYAL2
BTG1
SERINC4
SERF2
HYPK
RPS19
CD79A
HEXIM2
NFKBIZ
UBE2L3
NRIP1
ZFP36L2
PHLDB2
SELENOW
CNOT4
STK17B
CENPE
HSPB1
UBE2J1
DUX4
COL23A1
PLSCR1
EPC1
TRAPPC3
MAP7D1
TOP2B
FKBP3
FANCM
CITED2
PPIB
ITPRIP
TMEM260
RPLP1
CPEB2
HIF1A
PCBP2
C11orf94
ETS1
PLPP3
MYO9B
HAUS8
NT5E
FN1
UBE2S
RPS3
TNPO1
NDFIP1
DUSP6
PLXNA2
NPC1
SRXN1
STC2
ASPH
AHR
FAM53C
CDC25C
KCMF1
GAPDH
AFF1
LEPROT
LEPR
SERBP1
FHL2
USP25
UHRF2
HOXB2
VGLL3
DUSP1
MACIR
TGFBR2
HOXD8
PRDM10
NAA25
KDM3B
FBXO30
EPHB2
BAG3
UBAP2L
C1orf43
SMIM3
KLF6
DPYSL3
FBXO11
PHLDA1
WEE1
HECTD1
HNRNPU
GADD45A
TBX3
NIPBL
POLG
TARDBP
SOD2
WTAP
RND3
SHC1
PYGO2
PBXIP1
LOC101928120
PSMD3
STRIP2
FTL
ZC3H12C
INAVA
RNASEK
C17orf49
L3HYPDH
JKAMP
NUDT4
MAP4K4
UNK
H3-3B
PPP1CB
LSM14A
MCL1
MIF
CDKN1B
APOLD1
CDC42EP3
TGFBR3
CSNK1A1
MAML1
KRT81
MARCHF7
FBN1
NUDT4B
IER5
RBBP6
RNF24
H4-16
H2AJ
RFX8
WDR38
RPL35
ARPC5L
SOCS3
FTH1
BEST1
CD44
FOXC2
FOXL1
CXCL3
CAMK2N1
IRF2BP2
ZFP36
PLEKHG2
FAM110A
ACSL3
MAP4K5
ATL1
PEAK1
HMG20A
ARHGAP29
DNMT1
TP53RK
SLC13A3
CSF1
LPAR1
HMGA1
IQCE
BRAT1
SOCS5
SLC20A1
MT2A
VEGFC
KRT18
NSMAF
SCAND1
DUT
POLR2M
TBC1D8
TTLL7
RORA
TPRA1
MCM2
VIM
PKIA
SEC23B
RBBP9
S100A13
S100A1
CHTOP
CLIC4
OSMR
GDI2
FAM160B1
STXBP5
ELL2
TOP1
OXR1
PPM1B
SKP1
ELK3
PAPPA
PABPC4
PRKCI
GADD45B
RTN4
IFI27
MSL2
SPRY2
ZFHX4
MIOS
SNRPD2
QPCTL
H3C13
H2BC18
ID1
AMD1
ATP2A2
CCN2
TSPAN4
POLR2L
CD151
RPL10
DNASE1L1
AKR1B1
SOCS6
FAM227A
CBY1
SIRT4
KLF9
FAM20C
SHB
SPRED1
UIMC1
CITED4
CUL3
ULK4
STK35
MAP2K4
NAA16
MTRF1
STX1A
NOTCH2NLC
STK24
ZFP36L1
ACTN1
ANP32E
PPP4R3A
LMNA
CRPPA
HINT1
PTPN9
RHBDD3
EWSR1
ATG16L2
HERC4
NOTCH2NLA
KCTD9
CDCA2
NIPAL2
RBPJ
SMC4
IFT80
FOSL1
CCDC85B
MARK3
FIBP
FAM126A
RPS6KA2
TTF1
CFAP77
CSTB
SYTL3
DYNLT1
TANK
LRRK2
IER5L
SPATA9
RHOBTB3
CNOT6
TMEM131
SIX1
SH3BP4
PPP1R9B
ASH1L
ABL1
RGL1
ARPC5
SKI
NME2
GOLGA3
APBB2
UBL3
EIF3B
SERPINE2
MAT2A
ATAD2B
TST
MPST
WDFY2
KCTD12
SCD
PKNOX1
PMVK
EIF4A2
TRAK2
STRADB
H2BC21
H2AC21
H2AC20
XPO1
SNTB2
TEAD1
PABPC1
ITFG2
FAM120AOS
FAM120A
FKBP4
SLC25A37
DUSP5
LANCL2
HTRA1
ARMS2
BICC1
TERT
NDST2
NTM
SERINC2
DCBLD1
SNAP29
PI4KA
PTK2
EEF1A1
ASF1A
RALY
SASH1
FLVCR2
LHFPL2
RRAS2
PKM
KDELR1
GRIN2D
RPS20
PTP4A1
TNKS
CUL2
IGFBP7
PFDN4
PSMD14
FJX1
HDGFL3
MBNL1
JAG1
PTEN
KLLN
PRKD1
H2BC5
H1-4
PPP1R13L
POLR1G
PMAIP1
PRKDC
MCM4
PITPNC1
DLC1
TWIST2
TRA2B
DVL3
HNRNPC
PTOV1
MTCH1
AKIRIN2
UFD1
CDC45
NOCT
VEGFA
RAB14
GSN
GNAI1
RBPMS
PIGL
NCOR1
LPIN1
EIF4A1
CD68
LOC100996842
MPDU1
WNK1
OGFRL1
SVEP1
TNFRSF21
TRIB1
C1GALT1
FBXL5
CLCF1
RARB
HNRNPUL1
ADAMTS5
MTDH
B2M
DENND1B
PHF3
PIK3R1
UBE2B
CDKL3
SYNCRIP
ZNF326
DCAF5
EIF4G2
ATP9B
RUNX1
NOTCH2
NDUFS5
SEC61A1
MORF4L1
ZEB1
ADNP
GOLPH3
PTPN14
GNG11
EMC8
COX4I1
SPCS3
PPP1R12A
FOSL2
C6orf62
DHRS2
UQCRQ
LEAP2
GDF9
CAVIN1
S100A6
S100A5
MAP3K20
SS18L1
PSMA7
PAK2
METTL9
IGFBP4
RPL13
TMEM242
ZC3H10
RPL41
PHLDA3
ARF6
TRPS1
PDIK1L
HNRNPLL
EIF4EBP2
CREB3L2
HAS2
RPS15A
HMGB2
DDX17
YTHDC1
DYNC1H1
CDC42EP1
ZFAND5
BNC2
FRMD6
CXCL2
DYRK1A
TLK2
LTBP2
TUBA1B
ACYP2
UBP1
LY6E
RAF1
FNBP4
ZNF286A
LATS1
PRDX2
RPS16
JUNB
EFNB2
FOXQ1
PXDC1
PPIA
TPM4
PRDM2
ZCCHC3
C20orf96
TLE4
IGF2BP3
SLC39A10
PPP3CC
ATF7-NPFF
ATF7
MTRNR2L1
USP15
RAD23A
CALR
PPM1L
ITSN1
CRYZL1
PKD2
CBLB
HEXIM1
DCUN1D1
COQ10A
ANKRD52
RAC1
USP47
MYL6B
MYL6
DDAH1
CCN1
SPSB2
NFYC
TPI1
PIK3CA
UBL4A
LAGE3
CDON
PPP2CA
ADM
CUL1
HNRNPM
VAPA
FAIM
CDO1
CTSL
IFITM3
IFITM1
SLC25A3
TMEM158
HNRNPA0
ZFHX3
GNB2
UGCG
GCLM
PLXNA3
FAM50A
SUCLG2
FAM193A
SFN
DPYSL2
TSPAN5
CAPZA2
CEP85L
PITX1
ANXA5
TRIP10
GPR108
NDUFB1
CPSF2
DOT1L
CDK17
ITGA3
EID1
KLK9
KLK10
SHOC2
BBIP1
H1-2
LDHA
SMURF2
TNFAIP3
SP3
CTSB
FGFR1
PYGB
ATF4
SCYL1
NFU1
RHEBL1
KMT2D
NIBAN2
ATOH8
PPP5D1
CALM3
WASL
KCTD3
WWTR1
CNN3
DST
FAM3C
SLAIN2
ARID1A
CEP350
MRPL52
MMP14
SENP6
HOXC10
QKI
POLK
CERT1
SPSB1
MATR3
CLMP
IVNS1ABP
ZEB2
MAP2K2
SERP1
EIF2A
TGIF1
EP300
PPP4C
ALDOA
YAP1
TNRC18
LOC100129484
LEMD2
GDI1
KDM2A
CHD2
PAFAH1B1
KCNMA1
ETV2
COX6B1
LIN7B
PPFIA3
C19orf73
ZFP14
MANSC4
KLHL42
RASAL2
TUBA1C
BAZ2B
NECTIN3
JOSD1
GTPBP1
PTPRG
UBN1
GLYR1
NT5C3A
GRAMD2A
ZC3H6
ZNHIT2
FAU
TM7SF2
TRIM8
RAB28
CFL2
MYO1B
RAI14
AGO2
ANTXR2
GNAS
SRSF2
MFSD11
RPL39
HSP90AA1
METTL23
JMJD6
MSL1
STIM2
COTL1
BASP1
MTHFD2L
PICALM
LIMS1
ZNF300
PCIF1
CTNNB1
EGLN1
GJC1
THUMPD2
GLUL
TEDDM1
SOWAHC
SEPTIN10
SMIM29
RPL10A
CAPN7
RGMB
SNED1
MKLN1
MFSD14A
LUC7L3
ROMO1
NFS1
PDE4D
TLE1
CHST3
ATXN2L
CHIC2
TCF12
IFFO1
PGP
BRICD5
MLST8
CASKIN1
UBTF
DPF2
AEBP2
SSB
REPS1
KLHL21
BRD2
GALNT2
IER3
FLOT1
FEM1C
TMSB4X
UBXN4
FERMT2
ALDH4A1
SLC1A5
PTPN1
BDNF
QSOX1
UNC119B
FOXO3
FBXL14
LIN7A
FDX1
LUC7L2
FMC1-LUC7L2
FMC1
TTC9C
HNRNPUL2
CDK13
BCL6
BMPR2
ATP1B3
ZNF217
UGDH
RC3H1
UBE2D2
SPATA1
SNX5
MGME1
GNG5
PPP1CC
SACM1L
ELOA
RNF146
EEF1A2
MTCL1
TMEM129
TACC3
SLBP
GTF3C6
AMACR
TCTA
RHOA
BNC1
TGFBI
ARL4C
ZDHHC2
ZNF319
USB1
SH3GLB1
SMNDC1
COL6A3
ERBIN
ZNF517
RPL8
ZNF34
UHMK1
SACS
UQCRH
LRRC41
PDLIM5
TSPAN14
CD59
SLC38A2
ZDHHC20
IGF2R
AK3
ROCK1
JUN
FMN2
STX10
IER2
PSMA4
CDV3
USP3
GNB1
LRIG1
ITM2B
KTN1
GPR176
UBE2E3
UBA3
ARL6IP5
YY1
SNAPC3
ACOT1
APTX
DNAJA1
RNF19A
PHC3
PSPC1
ANO6
BCAR3
RALGPS2
BZW1
KIF13A
SPATS2L
STAT1
TRIOBP
ZFAND3
SKIDA1
MLLT10
NTN4
MIDEAS
SESTD1
NFIB
KLF7
RNF217
SDC4
EDEM1
TSC22D2
H3-3A
COMMD3-BMI1
COMMD3
BMI1
WDR82
GLYCTK
HP1BP3
ATP2B1
HNRNPR
GRAMD1B
PPP2R5A
PCGF5
CNBP
MYH9
TICAM2
SNTB1
IFIT5
C12orf73
RAD21
CD55
SLC26A6
SIK3
PTBP3
TKT
C2CD2
CALM2
OTUD1
COL1A1
PHRF1
COMMD6
UCHL3
SRSF10
CNIH1
RNF170
HOOK3
TMEM50B
LOC102724770
DGCR6
CCNT2
SPEN
RAD23B
RAP2B
PPM1H
ARPP19
SGPP1
LGR4
C9orf85
ABHD17B
GPR173
PREX1
MMP2
MDM2
TWSG1
ANKRD10
CDKN2AIP
FAT4
CRYBG1
ZFYVE9
CPD
CCNI
ARHGEF12
H2BC4
H2AC6
TERF1
RAPH1
NTNG1
TBCA
RAB10
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
POLR1B
CHD9
UTP11
FHL3
HSD17B12
TRAM2
SH2B3
NRF1
NFIX
DHRS3
MRPS24
TPBG
UHRF1BP1L