ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186640 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◣ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

UNCX
PRCC
H4C12
H4C11
H2BC14
H2AC14
PMF1-BGLAP
PMF1
CD70
PAX1
H4C3
H1-6
MCM5
SELENOT
ZBTB8OS
RBBP4
H2BC15
H2AC15
H3C6
H4C6
H1-3
H4C7
H3C7
POU3F2
GTF2A1
CDKN2C
H1-2
H3C3
OTP
CNOT3
H3C4
H4C4
H2BC6
DUX4
CNOT4
ZMYND11
H4C8
TNRC6B
IGFL3
HOXB8
HOXB9
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
H2BC8
H2AC8
PAX3
TBX3
SOX17
HSP90AB1
SLC35B2
EOMES
H4C5
H2BC7
H2AC7
XRN2
H2BC5
H1-4
EGR1
PAX9
MRPS18B
ATAT1
H2BS1
RPS3A
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
CSDE1
EBF1
INTS2
SF3B4
MTMR11
H3C13
H2BC18
MAMDC2
H2BC21
H2AC21
H2AC20
ZBTB4
SLC35G6
POLR2A
RBM8A
PEX11B
RPL11
EYA1
FLNA
EMD
BCLAF1
USP11
ZC3H10
RPL41
TMEM229A
EPC1
TEX50
ZGRF1
LARP7
RPS15A
IL22RA1
H4C13
H3C11
H2AC16
H1-5
NR2F2
CELSR3
MTREX
DHX29
CTNND1
NUDT8
HNRNPA3
H4C2
H3C2
H2AC4
H4C1
BRD2
ZFP91
LPXN
DDX19B
AARS1
FEZF1
PPWD1
CENPK
NQO2
MAP3K20
RPS11
RPL13A
H3-3A
RPS20
SYF2
NR2E1
H3C1
H1-1
HMGA1
NFX1
POLG2
DDX5
TRAF7
RAB26
EEF2
PWP1
RPL10
DNASE1L1
FGF2
GMNN
GTF3C6
TUBB
MDC1
H2AZ1
DNAJB14
PTPRN2
FOS
PAX7
TAF1D
C11orf54
ZNF253
POU4F2
RPL5
STK3
OSR2
RPL18A
ANP32E
RPLP0
GCN1
TBR1
RPS16
VCL
SUPT5H
PRDM6
TBL3
RPS2
RNF151
RPL3L
NDUFB10
ERBB2
PGAP3
KDELR1
GRIN2D
NSRP1
BHLHE22
BMP4
SLC25A25
NAIF1
EIF4A2
SETD1B
RHOF
FRG2C
H2BC4
H2AC6
RPL27A
ZNF639
ZNHIT2
FAU
TM7SF2
JADE1
RPL3
ALX4
PPP2R5B
ATG2A
PNISR
FOXF1
RCC1
EIF4A1
CD68
LOC100996842
LHX5
ZFHX3
NOP58
TRMT12
RPL21
MYL6B
MYL6
GTF3C5
ILF3
EEF1A1
PPP2R5C
DBT
SOWAHB
SETD2
RPL36A-HNRNPH2
RPL36A
BTK
RPS23
ATP6AP1L
ZWILCH
RPL4
SNAPC5
SRCAP
LOC730183
SFTPC
LGI3
BMP1
RAB13
RPS27
RPS3
GTPBP6
CRYBA2
FEV
HMX2
HMX3
LBX1
RPL22L1
PAX2
DNAJB4
FUBP1
TSC22D1
AMD1
RPS12
GABPB2
FOXG1
DHX9
EMSY
OAZ1
TMSB4X
ZCWPW1
PPP1R35
MEPCE
H4-16
H2AJ
MRPL1
MSX2
IRX3
MEIS2
IRF3
BCL2L12
SPRYD4
STX10
IER2
NR2F1
CD24
BEND3
RPL37A
RPL12
LRSAM1
ANKRD18B
SRSF3
TRA2A
PCBP1
SCRG1
PTPA
CRAT
LMLN
IQCG
RPL35A
RUFY1
H2BC9
TSKS
AP2A1
PSMD3
HEXIM2
LRCH4
FBXO24
PRMT1
CDK2AP1
INO80D
CDC6
UNK
H3-3B
UQCC3
LBHD1
CSKMT
C11orf98
RCC2
SEPHS1
RPL23
NKX2-8
LMX1A
UNC45B
NLE1
ADNP
NFKBIL1
DDX39B
ATP6V1G2
TRIP11
PFN2
ZNF565
ZNF146
STAG2
PSMA2
MRPL32
PPIC
LOC102724770
DGCR6
DLX1
HSPA4
ZDHHC17
DLX2
HNRNPC
KAT7
JMJD1C
SET
S100A13
S100A1
CHTOP
ARSJ
GINS1
DMRT3
FGF12
MORF4L1
NDFIP1
NFIX
NDUFB5
MRPL47
PSPC1
TBCA
ARAP2
RSRP1
DDAH1
CCN1
HYI
CNN3
H3-2
RPS29
RMI1
HNRNPK
WDR33
LUC7L2
FMC1-LUC7L2
FMC1
SARNP
ORMDL2
NOCT
FAM160B1
FBXW4
PABPC4
COMMD3-BMI1
COMMD3
BMI1
HOXA3
MARK2
UBC
COPZ1
RNF146
RBMX
OIP5
NUSAP1
PHGDH
ACTB
EFCAB2
SLC3A2
XPO1
PPP1R12B
UBE2T
ITGB2
TMEM138
CYB561A3
CCNB1IP1
ZIC4
ZIC1
CETN3
HOXA9
HOXA10
TNKS2
PTPN4
SIRT4
SERINC5
VAX2
ID1
MIA
RAB4B
TTYH2
RPL38
MYL12A
TRAPPC6B
PNN
MEIS1
RPL37
CARD6
RPS10-NUDT3
RPS10
ZCCHC4
RPL15
NKIRAS1
TSEN34
MTDH
ZRANB2
NKAIN3
HNRNPA1
CBX5
OXA1L
C19orf48
RBM12B
KANSL1
TMEM183A
USP54
SIX1
SF3B3
COG4
PPIA
RNF5
AGPAT1
AGER
PPP2CA
ZNF207
C17orf75
XKR4
ZFAND5
HSPA9
CCDC83
NASP
RPL10A
ANK2
ZC3H6
HOXA2
POPDC3
AVPR1A
SPAAR
HRCT1
DNAJC6
H2BC17
H2AC17
H3C12
TBCC
BICRAL
TCF21
ZBTB37
SLTM
TRAF4
SOWAHA
WDR74
STX5
IL15RA
PHRF1
NCAPD2
MRPL51
BAZ2B
USP45
TSTD3
SRSF5
CBX4
PHF14
KCMF1
DDX6
SLC7A11
SLC25A6
WDR1
ADAR
SUGT1
SINHCAF
PTGR2
AMZ2
MARCKS
PPIL3
NIF3L1
TOMM6
PRICKLE4
FRS3
FOXF2
ZNF687
RPL34
MTRNR2L1
TXNIP
BARHL2
MUC1
FLI1
NOG
TPM1
SMIM14
HLX
ZNF850
DPPA4
KCNJ5
HNRNPH1
CSTF3
ST8SIA6
PAX6
VAX1
OLIG3
SRSF7
TIA1
PCYOX1
SF3B1
UGP2
SCFD1
ZNF561
TFAP2A
ZNF121
RPS6
MNX1
MATR3
ATF4
UBAP2L
C1orf43
PRDX3
TMX1
FOXD4
ZNFX1
EIF4B
TMEM171
GMCL2
DDX17
PCNA
CDS2
TMEM230
FKBPL
ATF6B
UBTF
TTPA
NSMAF
FOXD1
FBXO46
ACAD9
SOD2
WTAP
TPT1
CCN2
TMA16
BAZ2A
ATP5F1B
GALNT2
CNIH1
RPS27A
CLHC1
EPHA5
L1TD1
PCBP2
SECISBP2
CKS2
ART1
RAB11B
NSD3
LETM2
ZC3H12C
GPATCH8
KNTC1
PPIG
MCL1
RDX
KDM3B
H3C10
H2BC13
H2AC13
PPP1R15A
PLEKHA4
ZNF319
USB1
RPL31
RAB6D
EPHB1
DPY19L4
SHROOM1
SART3
ISCU
ONECUT2
HMGB1
PUM1
RMDN3
GCHFR
IP6K2
KCTD8
MED26
SKIDA1
MLLT10
SOX6
C11orf58
ACACA
TADA2A
RGS6
OCIAD1
DDX42
CCDC47
TMEM259
CNN2
SULF2
ANKRD60
SLFN12L
TP53BP2
ELP5
CTDNEP1
CLDN7
SALL2
RXFP4
KHDC4
CHD9
TMEM14C
KRR1
RPL26
KRBA2
YARS2
DYNC2I2
SUPT16H
LIN7A
RPL17-C18orf32
RPL17
C18orf32
MORF4L2
GATA4
ACTR3C
HSPA1B
CCDC115
DGCR8
IMP4
UQCRB
ZNF675
ATF7IP
PRIM1
RPL14
HEXB
RPL32
ZBTB11
RPL24
SEC24C
LHX9
C1orf53
TRA2B
WRAP53
TP53
OSBPL1A
L3MBTL2
NAA50
ATP6V1A
SCGB3A2
YAP1
CDC42SE2
ZNF93
LDHB
CPEB2
TET2
LAMA2
SKA2
PRR11
SHISAL2B
NEMF
PRRC2B
GRM4
DLX6
PPM1B
MMADHC
ISL2
JUND
IQCN
TWIST1
MORN3
TOPORS
SMIM27
SLITRK1
HNRNPU
H1-10
FOXD4L6
PAX8
NFYC
HDLBP
SEPTIN2
PHF8
SRSF6
EGLN1
YAF2
ZSWIM1
SPATA25
NEURL2
CTSA
TNFAIP2
NPAS3
GAPDH
PCIF1
RPS13
JARID2
FTH1
HMBS
H2AX
DPAGT1
MED13
NEXN
NECAP1
SIM2
GDI2
RPS8
MYADM
GPC6
EIF1
TNPO3
SRSF11
H3C8
H2BC10
TBC1D17
PNKP
AKT1S1
SRSF1
SIRT1
GDF5
CEP250
GRPEL2
ARRDC3
MRFAP1L1
BLOC1S4
TRPC6
RPL22
RNF207
MAP2K4
SNRPB
COLGALT2
PELI2
RPRD2
GATA6
HOXA11
PPP4R2
MED12L
RALYL
CAMLG
ZNF587B
CXADR
HMGN3
PHOX2B
POU3F3
TRIM24
KIF20A
BRD8
RAB30
SERPINH1
H3-5
ZC3H7B
RANGAP1
AEBP2
SDHAF2
CPSF7
FAF1
RNF7
CWC22
VMP1
PTRH2
TENT5B
DPP6
TPBG
RPSA
HNRNPA0
CAMTA1
PLK4
TPD52L2
ABHD16B
APOB
TOP2B
ZNF143
NACA
WDR6
CNBP
PTBP1
RNF220
UBXN2A
OSGIN1
SHOX2
RSRC1
SETDB1
C8orf34
DCUN1D1
RBPMS
EIF3E
PBX2
GPSM3
MID1IP1
FOXC1
PRR5L
COMMD9
MARCHF11
PSAT1
WAC
COX20
TM9SF4
NUFIP2
UHRF1BP1L
BORCS6
SPHK2
RPL18
FAM83E
FOXB2
TMEM178B
PSMD14
PTPRM
HNRNPA2B1
CBX3
AMOTL2
RPL6
PTPN11
MTHFD2
COMMD1
CCT4
MRPS18C
HELQ
TARS1
MRPL45
PPIP5K2
GIN1
LHX8
XKR9
LACTB2
OR2B2
TMEM128
TBL1XR1
USP1
MTF2
NUP42
HELLS
MB21D2
FNBP4
CYTH2
C1GALT1
NCOA2
CNOT2
CRLF3
ATAD5
SOCS6
ETS1
PHF12
TRAPPC4
RPS25
LRRC37B
SNRPA
C19orf54
RABGGTB
MSH4
TLCD1
RPL23A
RAB34
PROCA1
NEK8
LMNB1
GJA1
SETD9
XRRA1
SPCS2
RBM15
BCAT1
KCTD1
TMEM163
NKX6-3
MRPS10
RPL19
CACNB1
LANCL2
USP25
CNOT1
FAM174C
CIRBP
WDR82
GLYCTK
ZCCHC17
SNRNP40
ARF4
RPL30
COX7C
SNRPG
FAM136A
THBS1
DIPK2A
PNRC2
IRF2BP2
PCNX4
USP21
UFC1
WWP1
CSE1L
PHB2
PKN2
HOXC11
ZNF615
DLX5
RFX4
TMEM238
TMEM190
RPL28
ARGLU1
BCL10
NMD3
RFC3
USP44
RHBDL3
EED
LAMC1
GABPB1
INTS8
SMN2
SMN1
CCNL1
FER
SRSF4
FAM32A
CALD1
EIF2S2
PPP3CC
RNF168
NDUFA4
TDGF1
GFRA1
NPM1
TPRA1
MCM2
XPC
LSM3
TCF7L2
SLC2A3
FAT1
EXOSC8
ALG5
NR5A2
NHLH2
IRX1
SP9
NIPBL
TBX18
CACYBP
LARP4B
NOL4L
DMRTA1
PAAF1
COA4
RNF180
GRHL2
KMT2E
PLXNA2
VPS35L
SUSD5
SLX4IP
MKKS
FAM168B
NGDN
CFDP1
GATA3
RBM5
DEK
SOX4
EZR
PBRM1
GNL3
ZNF43
RPLP1
ZFP36L1
USP6NL
GRIPAP1
ZNF644
PCNX3
MAP3K11
DENND6A
VGLL2
NOVA1
ZNF577
ZFYVE9
STK40
AKAP10
ZNF362
TRUB1
EVX2
CSNK1A1
CCDC106
U2AF2
OTUD7B
RAC1
ANKRD10
TEAD1
MED31
C17orf100
RAD23A
CALR
GLUL
PWWP2A
SNX5
MGME1
BICD1
SOX2