ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4411665 | LNCAP
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◢ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◣ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

DIPK2A
EFNB3
EIF4A1
CD68
SENP3
ZFYVE28
BCO1
LOC102724770
DGCR6
TRABD2B
ERICH5
CSNK1A1
ZCCHC18
ZYG11A
LILRA5
GPX5
PAQR5
F13A1
PMF1-BGLAP
PMF1
BSPRY
SNX32
MSN
DYNC2I1
CTNNA2
MYOF
TLE2
CACNA1A
SIGMAR1
GALT
IL11RA
ZCCHC10
CSPP1
COPS5
PPM1K
WFDC3
DNTTIP1
ADAMTS20
BMPR2
MTRNR2L1
ROPN1L
RAB6B
GPRIN1
DNAJB12
GINM1
NOS1
PPFIA2
CXCL1
PTPRD
CDH2
TEX46
KDM1A
TAS2R39
PTPRN2
KRT24
DUX4
ERG
TTC39C
PPRC1
LDB1
YOD1
PFKFB2
ZNF117
MAPKAP1
OR2F1
RBM28
CNKSR2
CWF19L2
RAPGEF5
SPATA2
MTRNR2L5
PGBD3
EPCAM
MKS1
C1orf189
NDUFS5
AP2B1
PEX12
TBC1D26
GP6
CTLA4
ABCC2
SIDT2
TRIM42
DEFA4
SULT4A1
PAFAH2
PABPC1L2B
FAM161A
BOLL
PLAAT5
ZNF483
CYP2J2
REG1A
FOXD4
MYCBP
GJA9
SLC4A8
GALNT6
TWSG1
SPSB2
RAB1A
PARL
PARD3B
SMIM29
MTHFD1
MRTFA
PROX1
HDGFL1
ZNF99
LOC284898
SGSM1
C7orf65
PLEKHG4
CLN6
RPL21
MED17
HARBI1
ATG13
RABEP2
CD19
KCNRG
GOLGA8A
CPS1
WIPF2
KIF5C
SELENOT
CHST8
COL21A1
B4GALT6
MUC15
PROX2
STRN
LCTL
OR5H6
TMEM144
CCDC39
LHX4
ST6GAL1
TPD52L1
BRDT
VPS33B
RAD51D
FNDC8
MTIF2
TRO
INTU
FRG2C
GABRB3
SEPTIN8
B3GAT1
TMEM81
TBC1D31
CUL4B
RNF148
RNF133
MTRNR2L8
MAP1LC3B2
PSMA8
FRG2
SPATA31D1
NLRP8
TTLL11
NUP205
TMEM273
ARHGEF3
PLPPR1
DGLUCY
RPS6KA5
TFEC
LDHD
KLK3
URI1
RLN3
SEMA3C
MEPE
MANSC1
MYOM2
HRNR
RGPD2
RGPD1
SLC25A39
MTX2
GRM3
TAGAP
C2orf83
IL33
XPO1
TSHZ2
STC2
UPF1
H1-8
SLC35E2A
COL23A1
TSPAN3
PRCC
MAMDC2
MARK2
RGS13
NUDT1
MRM2
MAD1L1
MAP3K20
CCDC3
PAGE5
SHQ1
SLC35E2B
CMSS1
FILIP1L
PRR23C
EMC4
KATNBL1
ZSCAN32
ZNF174
KIAA1210
SPDYA
FBXW4
SETD2
ARHGAP21
MTRNR2L2
MSH3
DHFR
MRPL28
ATF4
INO80D
NDFIP1
ZC3H7B
RANGAP1
JUND
IQCN
UBAP2L
C1orf43
NSD3
LETM2
KIZ
PABPC4
MED26
PCBP2
PABPC1
SLTM
H4C12
H4C11
H2BC14
H2AC14
ZMYND11
ZNF639
HECTD1
KDM3B
IRF2BPL
TNRC6B
SLC38A2
ZNHIT2
FAU
TM7SF2
RPS11
RPL13A
GDF15
EEF1A1
POR
FOS
MYL12A
CDCA7L
IQCH
AAGAB
CNOT6
PARK7
CNOT4
ZNF219
TMEM253
AKIRIN1
CMC2
CENPN
POLG
NOL8
CENPP
PAXIP1
C21orf91
ULK4
YY1AP1
DAP3
UROS
BCCIP
TIGD5
EEF1D
HDAC2
DNMT1
RPN2
MROH8
TARDBP
MYO9B
HAUS8
PHRF1
SMIM41
ATG101
KRT8
PTDSS1
MTERF3
PIK3R3
SOD2
H2BC15
H2AC15
FZR1
DOHH
SNAP29
PI4KA
MRPS18B
FBXO33
TCP11L2
KCNAB2
RHBDD3
EWSR1
ATAT1
FLCN
WDR38
RPL35
ARPC5L
PRKDC
MCM4
PSIP1
UIMC1
NOCT
H3C4
PRDX2
GIT2
ANKRD13A
HYAL1
FRAT2
EED
MYL12B
H4C5
H2BC7
H2AC7
TUSC2
FRAT1
LUC7L2
PPIB
RNASEH2A
ZWILCH
RPL4
TRIP10
GPR108
PFDN4
CENPE
DPP9
HSP90AB1
PKNOX1
C6orf62
HYAL2
UNCX
FMC1-LUC7L2
FMC1
BCL6
TAF15
CDON
TRAPPC6B
PNN
KDELR1
GRIN2D
PRMT1
SLC35B2
PRKCI
SS18
S100A13
S100A1
CHTOP
UFD1
CDC45
H3C13
H2BC18
H1-2
FAM53C
CDC25C
SNAPC5
RPS3
UBE2B
CDKL3
SELENOW
GNB2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
FAM227A
CBY1
FKBP3
FANCM
HEXIM2
TMEM260
RPL19
CACNB1
UNK
H3-3B
DGAT2
FUS
UQCRC2
USP15
RPS19
SRI
LRPPRC
CDIPT
TADA3
ARPC4-TTLL3
ARPC4
RPL22
RNF207
PTOV1
EIF3B
H2BC21
H2AC21
H2AC20
H2BC5
H1-4
NDUFB1
CPSF2
GMNN
NEMF
UQCRQ
LEAP2
GDF9
TBC1D17
RAB28
PNKP
AKT1S1
OGA
CD164
UFSP2
C4orf47
WRAP53
TP53
MAT2A
EPC1
RPL10
PPP5D1
CALM3
RNASEK
C17orf49
TACC1
COMMD6
ALDH4A1
NDST2
STK35
ASAH1
CSNK2A1
WASF2
IQCE
BRAT1
PPP1R13L
POLR1G
MIA2
H4C2
PRDM10
H4C4
RPS20
BAG2
RPL11
OXR1
ZNF335
PRPF40A
C6orf226
ARL6IP6
RITA1
DDX54
BZW2
ANKMY2
UCHL3
H4C9
RPS29
UTP18
MBTD1
CNOT3
OLFML2A
NR6A1
PMVK
H3C2
H2AC4
WASL
PSMD3
H4C1
TJP2
ATF7-NPFF
ATF7
TAF6
MBLAC1
CNPY4
SIRT4
EBF1
TSPAN4
POLR2L
CD151
CHMP3
DNASE1L1
GTF2A1
DSE
AFF1
TRA2B
GSTP1
ASH1L
MRPS24
CELSR3
SMC3
MYL6B
MYL6
ZBTB8OS
RBBP4
H2BC11
H2AC11
UQCRH
LRRC41
FTH1
RPS16
H4C3
H1-6
INTS2
GET3
PTCD2
MRPS27
NQO2
PTCD3
POLR1A
UBALD1
RALY
JUNB
TMSB10
RCC1
H2BC12
H2AC12
RSRP1
H3C6
ZDHHC5
H3C3
PDXDC1
HEXIM1
ZNF300
ZC3H10
RPL41
H2BC6
FAM110A
ZBTB4
SLC35G6
POLR2A
ART1
UBE2L3
RPLP1
RNF169
MRPS11
MRPL46
DOT1L
PGP
BRICD5
RNF103-CHMP3
RMND5A
CCT5
ATPSCKMT
H2BC4
H2AC6
SRSF3
GAPDH
UBC
RPS15A
H4C6
H1-3
DUT
KCMF1
CD79A
FTL
ANP32E
STX10
IER2
POLG2
DDX5
MORF4L1
CCDC22
CACNA1F
FRMD6
EIF4A2
RBBP6
SLC5A1
TSKS
AP2A1
SYVN1
MLST8
HMGA1
PIP4K2B
C11orf94
SRXN1
TUBA1B
ID1
HHIPL1
CCDC85C
ZFAND3
H4C7
H3C7
HBD
HBB
PKIA
ATG16L2
SPATA17
GPATCH2
SERINC4
SERF2
HYPK
GALNT10
RPLP0
GCN1
TPBG
SERBP1
SLC3A2
UNC45B
NLE1
ETV2
COX6B1
MIA3
IFT52
TRA2A
TRAF7
RAB26
RAVER1
RAB11B
ICAM3
HNRNPU
MTCH1
LYRM1
DCUN1D3
AMD1
LANCL2
BCLAF1
PRCP
DDIAS
HSPB1
BRD2
WTAP
PRR3
GNL1
PPIA
CEBPB
LOC100996842
PPP2R5B
MCM5
ATG2A
EIF4G2
BZW1
MGRN1
H4C8
MOCS3
H3-3A
DPM1
MTMR14
H2BC8
H2AC8
TBL3
RPS2
RNF151
SHC1
KRT19
KRT15
SMARCD2
TBX3
TSPYL4
TTF1
CFAP77
NAA10
ARHGAP4
PRR19
PAFAH1B3
TTPAL
LIN7B
LIN54
COPZ1
SETD5
DAZAP2
H2BC17
H2AC17
OAZ1
NFYC
H4-16
H2AJ
CDKN2C
TST
MPST
AGRN
INAVA
RPL3L
NDUFB10
CUL2
HNRNPA3
ACTB
ZDHHC2
H3C1
H1-1
HNRNPC
PPP2CA
HDAC1
TRAPPC3
MAP7D1
MCL1
TRPM4
HRC
CSDE1
PRMT2
TUBB
MDC1
SREK1IP1
CWC27
NFKBIZ
H4C13
H3C11
H2AC16
H1-5
RPL12
LRSAM1
ZC3H6
NIPBL
CLP1
FLNA
EMD
GDI2
RPS27A
CLHC1
NASP
RAD23A
CALR
BAZ2A
ATP5F1B
ISG15
ZFP91
LPXN
TMEM238
TMEM190
RPL28
RASSF7
LMNTD2
ATP6V0C
AMDHD2
SRSF1
ACTR3C
LRCH4
FBXO24
TMEM129
TACC3
SLBP
HMGB2
ATP8A1
KRT18
UBE2S
DUSP1
EIF1
H2BS1
MTRNR2L9
H3C12
H3C10
H2BC13
H2AC13
PRKAG2
TOP2B
VCL
WDR26
MPDU1
UBE2J1
CASKIN1
SRCAP
LOC730183
RMND5B
PPFIA3
C19orf73
SEC23B
SRSF7
C19orf48
HNRNPUL1
PYGO2
PBXIP1
LOC101928120
EEF2
RPL13
STRIP2
TPI1
AURKAIP1
TMSB4X
MUC3A
PCNT
C21orf58
PTPA
CRAT
BTG1
ZCWPW1
PPP1R35
MEPCE
ZNFX1
LY6G6F-LY6G6D
LY6G6F
ABHD16A
EGR1
FCHSD2
HSPA1B
OOEP
ARID3C
RPS12
RPL18A
PDIK1L
EFCAB2
H2AZ1
DNAJB14
PSMD14
LSM14A
CD70
DDX19B
AARS1
MDM2
POLR1B
LSG1
TAF1D
C11orf54
SYNCRIP
PIF1
MIB2
TP53RK
SLC13A3
DNAJB4
ZBTB37
SYF2
OARD1
NFYA
ZNF143
IER5
RPS3A
PTP4A1
NR2F2
FAM160B1
DIAPH1
CPEB2
SRSF2
MFSD11
RPSA
RPL39
SS18L1
PSMA7
MTREX
DHX29
FKBP5
PCIF1
RPL10A
FGF2
RBBP9
ATAD2B
FUBP1
SASH1
HSPA8
SLC25A3
ADNP
RBM8A
PEX11B
GTF3C6
RPL3
TUBA1C
ZNF517
RPL8
SMARCAL1
ANKRD12
RAB13
PSPC1
FOSL1
CCDC85B
UBTF
NSMAF
USP25
SNRPD2
QPCTL
ASF1A
MAP2K4
UQCC3
SRSF10
LBHD1
CSKMT
C11orf98
TMEM131
MIF
GTF3C5
HSP90AA1
FNBP4
KLF6
SH2D3C
CDK9
MBNL1
LMNA
HMBS
H2AX
DPAGT1
CNOT10
ZNF34
SCAND1
ITGB1
GADD45A
PPM1L
PHF8
DDX17
SRSF6
CCNT2
FHL2
MARCHF7
FANCI
PAX1
HNRNPH1
CDT1
APRT
PTP4A2
GTPBP6
CALM2
USP11
MAML1
KAT7
LSR
ZNF207
TPM4
C17orf75
RPS27
MATR3
CLIC4
CTNNB1
TTLL7
LATS1
PPM1B
CDV3
SUPT5H
CSTB
TCF4
GADD45B
RPL15
NKIRAS1
GABPB2
SLC25A25
NAIF1
VIM
RBM5
KCTD2
ATP5PD
PNRC2
PPP1R15A
PLEKHA4
HOXB2
DCAF8
TSEN34
FAM174C
CIRBP
BEST1
ADAMTS9
MTDH
HMGB1
DCUN1D1
PHC2
ANKRD17
PRRC2A
CYTH2
AIF1
TCF12
RPS23
ATP6AP1L
ZFAND5
SFPQ
LAMC1
IRF2BP2
SRPK2
ZC3H4
WDR37
IDI1
RPL27A
KMT2E
TNPO1
TNPO3
VEGFA
PBLD
HNRNPH3
RPS6
RPL22L1
APTX
CRKL
SKIDA1
MLLT10
JMJD1C
EIF2S2
HDLBP
HMGA2
TTYH2
RPL38
NME2
METTL23
H2BC9
SOCS6
FBXO30
TANK
HINT1
MMADHC
CCNL1
PPP1CB
RNF146
PAK2
ETS1
LMLN
IQCG
GOLGA3