ChIP-Atlas: Target genes

Potential target genes for CHD1

Query protein: CHD1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116453 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CHD1's Target genes

◢ CHD1: Average

◢ SRX150381: GM12878

◣ SRX116453: hESC H1

◢ SRX116454: hESC H1

◢ SRX150376: hESC H1

◢ SRX186640: hESC H1

◢ SRX186628: IMR-90

◢ SRX116416: K-562

◢ SRX116417: K-562

◢ SRX186771: K-562

◢ SRX1098750: LNCAP

◢ SRX1181993: LNCAP

◢ SRX4411664: LNCAP

◢ SRX4411665: LNCAP

◢ SRX2268289: Mesenchymal stem cells

◢ SRX2268290: Mesenchymal stem cells

◢ SRX2268291: Mesenchymal stem cells

◢ SRX2268292: Osteoblasts

◢ CHD1: STRING

UNCX
H4C12
H4C11
H2BC14
H2AC14
CD70
H4C6
H1-3
H4C7
H3C7
PAX1
H3C6
H2BC15
H2AC15
CNOT3
ZBTB8OS
RBBP4
H4C3
H1-6
MCM5
H2BC5
H1-4
ACTB
GTF2A1
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
H3C4
H4C5
H2BC7
H2AC7
FLNA
EMD
ZGRF1
LARP7
DUX4
STX10
IER2
H2BC21
H2AC21
H2AC20
TNRC6B
BRD2
HSP90AB1
SLC35B2
H4C8
RPS3A
JADE1
RCC1
H1-2
H3C3
H2BC8
H2AC8
MRPS18B
ATAT1
H4C2
H3C2
H2AC4
H4C1
HMX2
HMX3
TRAF7
RAB26
H4C4
H2BC6
TBL3
RPS2
RNF151
RPL3L
NDUFB10
SETD1B
RHOF
IGFL3
HMGA1
CD24
H2BC4
H2AC6
EEF1A1
RPS15A
ZC3H10
RPL41
H4C13
H3C11
H2AC16
H1-5
PTPRN2
IL22RA1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
XRN2
TUBB
MDC1
H3-3A
RPS11
RPL13A
EEF2
RPL27A
ILF3
H2BS1
NQO2
POLG2
DDX5
ZWILCH
RPL4
SNAPC5
CBX4
FGF2
RPL3
PCBP1
FEZF1
TRAF4
DDX19B
AARS1
SRSF3
SEPHS1
TEX50
EGR1
H2BC9
H3C10
H2BC13
H2AC13
TTYH2
RPL38
FOS
H3C1
H1-1
VCL
RPS23
ATP6AP1L
GTF3C6
ERBB2
PGAP3
RPS20
H2BC17
H2AC17
H3C12
ANKRD18B
EIF4A2
CELSR3
TAF1D
C11orf54
GTPBP6
H4-16
H2AJ
TBC1D17
PNKP
AKT1S1
HNRNPA3
H2AZ1
DNAJB14
CRYBA2
FEV
RPS12
ZIC2
RPL12
LRSAM1
RBM8A
PEX11B
CTNND1
PAX9
RCC2
SLC3A2
RPL36A-HNRNPH2
RPL36A
BTK
H3C13
H2BC18
RPL21
RPS16
SUPT5H
KCMF1
BCLAF1
DPPA4
SYF2
ZNF253
UNK
H3-3B
ANP32E
RPS3
PPWD1
CENPK
PWP1
RPL18A
SERINC5
RUFY1
IRX3
RPS29
RPLP0
GCN1
XPO1
RPL10A
LBX1
PTMA
MTREX
DHX29
MAMDC2
TPT1
NUDT8
MYL6B
MYL6
ZBTB4
SLC35G6
POLR2A
PTPA
CRAT
MYL12A
GDI2
DNAJB4
FUBP1
NOCT
SF3B4
MTMR11
RPL5
ANK2
LUC7L2
FMC1-LUC7L2
FMC1
RPL10
RPL11
KANSL1
PFN2
PPIA
RAB13
RPS27
DHX9
WDR1
MUC1
SINHCAF
NSRP1
CDK2AP1
USP11
PTPN4
RPL22L1
RPL37A
GDF5
CEP250
RPL23
TRIM71
TRA2B
ZBTB37
JMJD1C
NR2E1
AMD1
RBPMS
UGP2
GINS1
CSDE1
NFKBIL1
DDX39B
ATP6V1G2
RPL37
CARD6
PPP2R5C
MARCKS
USP44
WDR74
STX5
NOP58
ART1
DDAH1
CCN1
MCL1
HNRNPA1
CBX5
RBMX
LOC102724770
DGCR6
TRMT12
JUND
IQCN
LMLN
IQCG
RPL35A
TMSB4X
L1TD1
TLCD1
RPL23A
RAB34
PROCA1
NEK8
NFX1
NFIX
TENT5B
ZNFX1
HOXA3
ZRANB2
RNF146
SET
CSTF3
PHRF1
RMI1
HNRNPK
ZNF362
HYI
ID1
PPIL3
NIF3L1
HEXIM2
MORF4L1
TSC22D1
NUFIP2
FBXO46
CNBP
PNISR
CNOT1
HNRNPC
RPL26
KRBA2
SLC25A25
NAIF1
ZCWPW1
PPP1R35
MEPCE
MATR3
GABPB2
SKIDA1
MLLT10
SIRT4
EIF1
SARNP
ORMDL2
OXA1L
TOMM6
PRICKLE4
FRS3
JARID2
DBT
SOX2
HNRNPU
RPL31
BAZ2A
ATP5F1B
ZFAND5
ZFP36L1
SPAAR
HRCT1
BORCS6
ZIC4
RPL32
ADM
EFCAB2
OCIAD1
WDR33
RPL15
NKIRAS1
MID1IP1
TMEM183A
STAG2
ZNF561
UQCC3
LBHD1
CSKMT
C11orf98
EDIL3
PBX2
GPSM3
CAMTA1
NOL4L
SOX11
CCNB1IP1
NEMF
WRAP53
TP53
CXADR
HNRNPA2B1
CBX3
SIRT1
TXNIP
MDM4
NDUFB5
MRPL47
HSPA4
HSPA9
SCGB3A2
FAM174C
CIRBP
RPS8
FZD7
BAZ2B
H3C8
H2BC10
ZCCHC4
ZNF587B
NCL
RFC3
SLTM
ADNP
SPRYD4
PHF14
PCNX3
MAP3K11
SART3
ISCU
TET1
SF3B1
NAA50
ATP6V1A
SOX4
GRPEL2
SALL4
RPS6
RXFP4
KHDC4
EYA1
SF3B3
COG4
CAMLG
TSKS
AP2A1
PRDX3
TDGF1
NPM1
TIA1
PCYOX1
DDX6
MCM7
AP4M1
EIF4G2
COMMD1
CCT4
RPS10-NUDT3
RPS10
RAN
PSMA2
MRPL32
EPC1
PCBP2
DNASE1L1
ZNF687
ZNF565
ZNF146
SOX6
C11orf58
SRSF11
ARHGEF11
PRRC2B
SOD2
WTAP
GCAT
H1-0
UQCRB
SFXN1
HELLS
CNIH1
MYADM
MORN3
CDC6
TRIP11
FAT1
PDE3A
ZC3H6
ARGLU1
GULP1
TRA2A
RPS27A
CLHC1
PSPC1
TNKS2
NKX2-8
COPZ1
SRSF7
PPM1B
PPP1R12B
UBE2T
PHF12
HNRNPDL
ENOPH1
NR2F1
PHB2
VPS35L
TBX3
TPM1
TP53BP2
AUH
CNOT2
BARHL2
FTH1
RPLP1
FBXW11
EMSY
RNF5
AGPAT1
AGER
TBX6
YPEL3
TNFRSF12A
THOC6
HCFC1R1
CLDN9
CLDN6
SNAPC1
ACACA
SCFD1
TADA2A
PCNA
CDS2
TMEM230
HSD17B12
PPIP5K2
GIN1
CSE1L
SIN3A
MB21D2
ADAR
SNX5
MGME1
CCNB2
CCT5
ATPSCKMT
ZNF143
MIA
SMIM14
RAB4B
SLC2A3
PARN
BFAR
CCDC115
USP45
TSTD3
IMP4
THBS1
TCF4
TCF7L2
DDX17
ZIC1
ZC3H4
RACK1
SNRPB
ATP6V1G1
RABGGTB
TIMM44
CRLF3
ATAD5
VGLL2
MSH4
FNBP4
HNRNPA0
DYRK1A
TET2
MTHFD2
RBM25
CSNK1A1
PRIM1
RPL6
PTPN11
KIF20A
BRD8
NACA
CNN3
ZBTB11
RPL24
ACVR2A
ABRACL
UNC45B
NLE1
RAD23B
USP37
CNOT9
ZNF850
RPSA
IRF2BP2
SUGT1
TMEM258
FEN1
ZNF121
SLC7A11
GJA1
TMA16
DMRTA2
INO80D
ZFP91
LPXN
C19orf48
WEE1
ZDHHC17
TMEM248
NECAP1
XPC
LSM3
RPN2
MROH8
DGCR8
ARRDC3
ACAD9
E2F3
KLHL7
SALL2
ZNF793
TP53RK
SLC13A3
ZNF207
C17orf75
MRPS16
DNAJC9
ZC3H11A
ZBED6
TRAPPC4
RPS25
SGTB
NLN
AKIRIN1
USP21
UFC1
HMGB2
YTHDF3
GJC1
PHGDH
IP6K2
PPP4R2
ATF4
POU3F2
ZNF451
MRPL1
H3-2
KDM5B
DPYSL2
BCAT1
USP38
SPHK2
RPL18
FAM83E
TBL1XR1
CHAC1
UBAP2L
C1orf43
HSPA1B
USP54
CTCF
DST
NDUFA4
GAN
EPHB4
PYROXD1
KRR1
TADA3
ARPC4-TTLL3
ARPC4
RPL22
RNF207
RPL14
WWP1
BMP4
PPIL4
HMGB1
C1GALT1
DPY19L4
MORF4L2
RPL7
RDH10
MRPS18C
HELQ
ZNF217
WAC
SEC24C
HNRNPD
EGLN2
OR2B2
PUM1
TMEM128
MYO6
DNMT3B
AMZ2
ZNF878
XRCC6
DESI1
GMCL2
MAD2L2
DRAXIN
C6orf62
CCNL1
VPS13A
PROSER1
NHLRC3
GPR63
RPL19
CACNB1
GLUL
RPS14
RPRD2
OAZ2
HAUS6
TMEM259
CNN2
PGRMC2
ZBED9
TRPC6
GTF2H3
EIF2B1
CHAC2
TRAPPC6B
PNN
GAPDH
TSEN34
CLTC
SLX4IP
MKKS
LSM14A
YTHDC1
MUS81
CFL1
SRSF4
SIX3
MSL2
RBM12B
HNRNPAB
RAD21
SMARCC1
VPS52
RPS18
B3GALT4
LDHB
LCA5
SLC29A2
AP1AR
TPM4
GADD45B
MMADHC
SLC25A6
KNTC1
NCOA3
UCK2
DHX15
TOB1
TMEM223
TMEM179B
PKN2
KIAA1522
TUBA1B
SURF2
SURF1
RPL7A
MED22
STMP1
RPS13
SUPT16H
YAP1
JMY
CDC37L1
SUPT20H
WDPCP
MDH1
TRIM24
SACM1L
PRPF38A
ORC1
XBP1
RNF168
MTF2
PRKAR1A
ATF7IP
MRPL45
SETDB1
TAF15
PCK2
NRL
SDHAF2
CPSF7
PTGR2
AFF4
ADGRL2
REST
NELFCD
SLC25A3
PPP1R15A
PLEKHA4
DUSP6
NFYB
BCL10
ZNF93
HMGN3
NFE2L3
ECI2
IGF2BP3
CALM1
TERF1
RUNDC1
PTGES3L-AARSD1
PTGES3L
ZNF134
ZNF644
DNAAF2
SNRPE
N4BP1
LRR1
CCDC138
AP1S2
PRRC2A
AIF1
EIF2S2
GABPB1
PPIG
GSTA4
GOLGA4
TKFC
DDB1
DHX36
FER
RPL30
GPC6
TEX9
RFX7
RPP14
HTD2
TAF11
ANKS1A
PLXNA4
FUS
NDUFS5
NR2F2
DUSP16
FOXL1
TARS1
INTS2
TMX1
GRIPAP1
LARP4B
AKAP10
DARS2
CENPL
LRRC57
HAUS2
SLIRP
ALKBH1
ZIC5
PRR23D2
PRR23D1
NAA16
MTRF1
SNTB2
RPL17-C18orf32
RPL17
C18orf32
TEX10
SGMS1
PRKG1
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
NFYC
UBE2M
CHMP2A
GPBP1
ZKSCAN4
NKAPL
YEATS4
OSGIN1
ZSCAN26
NDUFS2
ADAMTS4
FAM168A
HDAC2
ASF1A
HDLBP
SEPTIN2
CCDC106
U2AF2
ITM2B
RIC8A
BET1L
ACIN1
NDFIP1
USP25
PPP4R3B
COX5A
CCNT1
LIN28A
OSGEPL1
XRRA1
SPCS2
AZIN1
BBX
VDAC2
ZNF524
FIZ1
ZNF865
RBX1
PDE11A
CCDC77
GRID2
PPP2R2A
NASP
HSPA8
RPL34
NMD3
C5orf34
DNAJB6
NREP
LIN52
ALDH6A1
MAT2B
DMKN
IFNE
PAK2
P4HA1
CHD9
PTPN14
CREBZF
CCAR1
RYBP
TNK2
TAF9
RAD17
AK6
PAAF1
ERLEC1
ASB3
COA4
LIN28B
CCDC83
RGPD2
RGPD1
NCAPD2
MRPL51
DDX42
CCDC47
CHD2
ANKRD10
SMAD7
CWC22
CCNH
FAM168B
CHRNA5
EXOSC9
NDUFB4
SRSF10
TPRA1
MCM2
ING1
CARS2
PMAIP1
CACYBP
CETN3
TGIF1
TUFT1
RCOR3
PSRC1
SETD9
DPP3
SUCO
MPP5
PPM1G
PHAX
ALDH7A1
BANP
ANKRD60
CCDC6
MARS1
ARHGAP9
CDKN2C
FAF1
SPATS2L
SEC14L1
SMN2
SMN1
NUDCD2
HMMR
OLFML3
C20orf194
TMSB4Y
MRPL20
SECISBP2
CKS2
MPZL1
ELP5
CLDN7
ATAD3B
SFPQ
ROCK1
XKR9
LACTB2
NDUFV2
TMEM14C
ZNF350
DNTTIP2
VEZT
FGD6
UBE4B
SRSF2
MFSD11
METTL23
JMJD6
PAFAH1B1
SERPINH1
YARS2
PDLIM7
WSB2
NR2C2
PRKD3
FOXD2
POGZ
ZNF131
PFAS
MDN1
SFRP2