ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111320 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◣ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
PPP5C
TIAM2
ING3
KIAA0319
DRGX
PIH1D1
HOXC4
GFRA3
SEMA5B
TOMM40L
KATNB1
DIABLO
SLC17A8
MTRNR2L2
ABCA12
PRR13
ZSCAN31
KCNAB2
ILF2
HOXC6
RIMBP2
RAPGEF2
CHD1
ZNF654
CGGBP1
EVI5L
ABCB8
LENG9
TAS2R20
FAM161A
C1orf185
MTRNR2L8
ZBTB45
CCDC33
CHCHD3
GRWD1
PRKAG2
KHDC4
EPRS1
MRPS14
SLC25A25
ZNF488
MGAT4C
PWWP2A
TBX2
STON2
GABRA1
SUGP2
ARMC6
TMEM60
PHTF2
INTS4
ASB8
ELAVL4
CHD9
VSTM5
PHF14
EEF1AKNMT
COX16
MRPL28
TNFRSF19
ID4
RHBDD1
TFPT
PRPF31
TUBG1
RETREG3
H2AC19
H2AC18
TIMM44
MFSD12
PSMC1
CALM2
ABAT
RP1L1
NEMP1
CENPF
PIGM
CCNG1
FDPS
ZNF555
RBM25
SMG5
RNF4
SUPT7L
SLC4A1AP
SIRT4
HOXA3
ATP5MC3
ASF1B
RUFY3
SLC18A1
USP40
SARS1
RAB39A
TOM1
ZNF510
GOLGB1
ITSN1
CRYZL1
PDCD1
ALG10B
MN1
RBM12
CPNE1
ASNSD1
ASDURF
UHMK1
PDCL
PAFAH1B2
MLC1
TFB2M
CNST
ADGRE5
ANKHD1-EIF4EBP3
ANKHD1
RABGAP1L
NGDN
ARL15
TMEM245
ESRRB
CDIPT
RIC8B
SMARCD2
EFCAB6
C3orf38
COG3
PMVK
CP
NUF2
LSM5
ERCC6L2
MTA3
TMEM126B
DLG2
MORC3
DLX6
TPGS1
PCDH15
ULBP3
PAXBP1
CWF19L2
TRUB2
COQ4
NOMO3
NOMO1
DPH2
MAP2
ACVR1
SLC17A2
TCERG1
NFYC
WDR74
STUM
VPS52
RPS18
RAB11B
AP3M2
BCAS2
HEXIM2
PRRC2B
THUMPD1
NOMO2
KHSRP
ZNF132
DBH
RPL6
WDR89
TCF4
FREM1
DHX16
TMBIM6
COL5A2
CSDE1
SFR1
AOPEP
PWWP3A
GBA
E4F1
SPART
SRPK2
SLC4A2
MRPS15
CLDN11
CDK5
SYNE3
CUL2
ZIK1
PPP6R1
KIF3B
CCDC89
BLOC1S6
MRPS33
RMDN2
TBL1X
ZNF106
TRMT1
FCF1
CREBL2
AREL1
ZNHIT3
C12orf43
LUC7L2
FMC1-LUC7L2
FMC1
CMTM2
ANO6
TOMM40
DAB2IP
HAGH
FAHD1
ZBTB40
ZSWIM8
SLC16A14
ZSWIM4
ICE1
RFT1
HDAC9
ARMH3
MPP4
GSN
CAND1
STRA6
SECISBP2
SH2D3C
SKA2
PRR11
RPRD2
EYS
HNRNPL
RALGAPA1
COPS7A
VLDLR
MRPL54
APBA3
RGS4
VEPH1
KRT13
CLASP2
HAND2
ZFAND6
GNRH1
TMEM167B
ADAMTS17
PDE4D
TNNT2
MRPL44
FLYWCH2
BAX
MAP2K4
INTS5
RPTOR
MEIG1
ZNF629
TSPAN3
CYTH1
ZCCHC8
DDX49
COPE
ZNF302
ZKSCAN5
SBDS
ATXN7L3B
ADAMTS5
CFAP69
MYT1
ATP2B4
TSNAXIP1
RANBP10
BCHE
OPA1
MFSD6
ZNF317
SYBU
TMEM106B
HES1
RPL27
P2RY6
SIPA1L2
RUVBL2
GYS1
CYP19A1
LIN37
EHD4
MATR3
CLDN15
GPR1
CCDC9B
PTPRE
TCTN3
H4C3
PSMD3
ALK
MIA3
ZNF169
SART3
ISCU
CIZ1
RPS7
GLDN
SEMA3C
ATP5MF-PTCD1
ATP5MF
ATP5F1B
ZNF350
VIPAS39
AHSA1
SPAST
EXOSC2
USF1
TRIOBP
RTTN
RPF1
PEX3
CLPB
ATG2A
ADAT2
TSC1
GFI1B
FAM98B
OIP5
NUSAP1
PNISR
OGDH
NUDT13
C10orf88
NDUFB5
MRPL47
ZFYVE26
WWOX
EIF3F
ZNF263
SUGT1
CCDC146
FRA10AC1
MYT1L
IPO4
TACO1
STAT3
SMC4
IFT80
MC4R
MRPL27
EME1
RBL2
TM9SF4
PPP1R12C
FAM220A
LSMEM1
SMG7
SCHIP1
RPAP1
MAB21L2
EYA1
CEP41
NFATC4
DPP6
ZC3HC1
SHD
XAB2
AKAP11
HNRNPA1
CBX5
AP2S1
TOX4
RAB2B
PIF1
RBBP5
KLHL20
MBIP
ZNF777
WDR12
THAP4
MPND
CARF
ABT1
SERP1
EIF2A
SLX4IP
YJU2
ZMAT2
SECISBP2L
APOLD1
KRR1
ZSCAN12
N6AMT1
GATAD2B
FBXW7
ELMO1
SP2
SULT1C4
PLXNB2
RPL38
PPRC1
EPHB3
CALCOCO1
CCDC59
FOXN3
ZBTB18
VPS25
UBE2F
TLR7
ELOC
COPS4
ANKRD17
TSPAN8
WDR36
RAB3C
ZNF821
ROCK2
MSH3
DHFR
CHRM5
EIF3D
COX7C
STT3A
ITFG2
TXN2
PAPOLA
GALK2
COPS2
TUFM
SH2B1
ZNF229
JARID2
HS3ST5
OGFOD1
NUDT21
TMCO1
SMG8
RFX3
HDGFL2
CHD8
BAZ2A
ZFHX4
RBM28
ATF6
PES1
CEP120
NDUFAF1
OSBPL9
PLEKHM3
ZNF566
ZNF225
RC3H2
SF1
ZNF614
PLA2G6
ISY1-RAB43
ISY1
GOSR2
EMC4
EAPP
KCNH2
FOXP1
RAD52
RTN4IP1
QRSL1
QDPR
UFD1
SF3A3
PSMB4
LRRC17
CDC45
HNMT
UTP25
LOC100289561
LNP1
PRKAB2
CHD1L
TMEM69
GPBP1L1
ZMAT4
PRPH
NVL
POLR3E
ZNF331
UBR2
DNM1L
ALG10
ARL17B
ARL17A
NFATC2IP
RNF6
LMAN2
COG7
CENPA
H2BC6
ZKSCAN3
OGFOD2
HOXD3
ATF3
SNX6
ARNT
TTR
ZNF493
ELL
CHKB
ARHGEF3
RPS26
POLR1H
FBXO34
ZNF548
ZNF264
SPRED1
NFIB
DNAL1
CLN3
SF3B6
FAM228B
CNOT1
STK11IP
SUFU
ACTR1A
FANCM
SPRY4
LUM
PIP4P1
VPS41
COTL1
ZNF227
MARS1
ARHGAP9
NLGN1
MADD
BPNT1
LARS1
SELENOW
VPS29
RAD9B
SSBP1
UBB
NDUFS4
LRWD1
IKZF4
FUBP1
FHL2
DNAJB4
CGAS
ALKBH4
SLC8A1
ZNF304
MRTFB
STX6
POLRMT
KBTBD8
GPR180
CDK5RAP1
AP3B1
RPS11
NDUFAF5
ESF1
SLC35B1
PRKCE
GMPPA
ANGPT2
SEL1L
MRPL3
ZNF726
VPS50
PEX12
MRPS22
LRRN3
HEPACAM2
DNAJC25-GNG10
DNAJC25
WDR46
PFDN6
ZNF226
GLIPR1L1
TMEM259
SLC1A5
RERE
RALGAPB
POC1B-GALNT4
PMPCB
HPGDS
HMGCR
GRAMD1B
DDA1
TRMT61B
LCN6
ATP5MC2
SF3B5
SHPRH
ZNF230
RBFOX2
RAB8A
KDM3A
EPS15
CIAO2A
CCDC61
AQP10
ZNF749
ZNF417
JMJD1C
ZNF484
MRPL24
LITAF
SEMA6D
ZNF737
TDRKH
PABPN1
C15orf62
PRMT5
MRPS23
ZNF552
GPR85
FDXR
ZNHIT6
YOD1
STEAP3
SCNM1
RPL3
PROSER1
PFKFB2
PARS2
NHLRC3
MED18
LYSMD1
KDM5C
PALB2
DCTN5
KCNT2
KCNMB2
PHB
CBFA2T2
KCTD5
CAMTA1
SP1
RPL24
NDUFB7
MFSD14C
DYNC2I1
C15orf40
ADAMTS1
CARD8
PTRHD1
GSTA4
CENPO
MFSD8
ABHD18
RAB11A
SGTA
PCBP2
NUP205
BDNF
SLC39A9
ERH
BANP
SOX4
ANGEL2
YME1L1
TPR
STK16
ODR4
GLB1L
ETV1
DNAL4
RAB30
CEP128
FAM126A
UTP3
SPHK2
RPL18
POLL
NFIA
GOLPH3L
DPCD
PTBP1
C12orf73
PHB2
ZNF74
PYROXD1
DNAJC14
TP53BP1
SNX17
EIF2B4
ZSCAN9
LCA5
VPS45
RTRAF
ZSWIM3
ACOT8
ENDOG
GGTA1
DLC1
TUT1
TTC37
TOR1A
FTCDNL1
ARSK
PPIL1
MSTN
ACTR6
ZNF565
ZNF146
ZNF793
WDR83OS
WDR83
PSMD9
PPIP5K2
NR2F1
HPD
GIN1
DSTN
BRCA1
MDM4
ASPM
GRAMD4
POLG
ZFP37
TSSK6
SCO2
RDH11
NDUFA13
H3C11
DMAC1
TMEM231
TNRC6B
ZNF668
ZNF646
SSUH2
ZRANB3
ZNF563
R3HDM1
PSMC2
PRMT2
MFAP1
LSG1
GGPS1
ARID4B
UBE2S
TTC31
CCDC142
NUTM2E
SYNJ2BP-COX16
SYNJ2BP
ZNF790
WDFY2
RPIA
PUS7L
OR2L13
OGT
KDSR
IRAK4
HSPA13
DCT
CRADD
CAPS2
ZNF764
QTRT2
MRPL20
DDX52
CCDC191
AUH
MBNL1
C5orf63
MYL6
FUZ
RBM48
PEX1
SPRING1
RNFT2
PRMT1
PPFIBP2
NME1-NME2
NME1
DENND4A
CCP110
ATF4
SREK1IP1
CWC27
B4GAT1
RAB5B
TAMALIN
GTF2H4
LETM2
STC1
SEC31B
ZSCAN16
PSMA5
NUDT4
HELB
FNDC3B
BEST1
ZNF608
SPAG9
PNKD
AAMP
PDE7B
P3H4
LENG1
FOXO3
FKBP10
DDX41
ANKRD40
KNL1
MAST4
ERGIC2
DUSP6
ZNF805
ZNF221
TRIM11
SMARCAL1
POLDIP3
MRPS17
LCN1
EXTL2
RPA3
LAMTOR5
DDX60L
COASY
C12orf57
POLR2J3
TAF5
PPIL3
NIF3L1
ANKRD54
ZNF564
STX4
SCD
CREB5
ANKRD28
RPL37
LRRTM4
BORCS7
RBP5
CLSTN3
CCDC90B
ZNF473
VRK3
ST8SIA1
RPS19
PIKFYVE
MRPS35
ATF7IP
SPATC1L
GALNT14
RASA3
PEF1
FEM1A
ZNF429
UBOX5
TCTA
RHOA
PCSK5
NUDCD1
FASTKD5
DNASE1L3
CCDC177
CACHD1
AGPAT4
CEP85L
MED16
SRFBP1
NCAM1
TBC1D17
POLR1F
INKA2
EIF2B5
DDX20
AKT1S1
CCDC130
UBA5
CNOT3
ZNF497
SCYL3
NOP16
NOL12
MBNL2
HIGD2A
COPZ1
CEP97
B4GALT3
MSANTD4
RPS5
STXBP5
MED28
G2E3
FGF7
CYB5B
ZSCAN32
ZNF174
CDK12
TMTC3
PUM3
PAK1IP1
NFKBIL1
H3C13
CEP290
C6orf52
ATP6V1G2
USE1
SUDS3
MFSD14B
KPNA6
GET3
ATP6V1G1
SEC22B
TUBA1A
NFKB1
MLLT11
CDC42SE1
TXNRD1
WBP1L
YARS2
TRMT12
ZNF776
BUB1B
RIMS1
DDR2
SIX3
ANP32E
POLD2
GEMIN2
GAP43
GPRC5A
GSK3A
PHF5A
ACO2
UTRN
NDUFA6
DHX34
SIRT2
NFKBIB
LINS1
ASB7
RAD51AP1
C12orf4
TTLL1
MMACHC
CCDC163
NIP7
COG8
OS9
DDC
WDR6
SPTLC1
GEMIN6
B3GALT2
ATG101
SDR39U1
PGBD4
EMC7
ZNF391
DNAJC12
CADPS
DPP9
PPP1R3D
FAM217B
CEP126
NABP1
UBL7
DUSP10
BAZ1A
MVK
PRUNE2
HAO1
PANK1
KMT5C
SPSB3
ANAPC15
USP6NL
DPYSL2
MPV17L2
TMEM160
PAF1
SNRPE
ZNF394
TTC36
TMEM25
PPP1R35
NUP42
ARIH1
STAMBP
RABEPK
DNM2
PKIG
PCDHB4
MTMR4
EEF1A1
COX20
MVB12A
SLC41A3
YAF2
ECH1
METTL7A
CCNT1
RPS27
ZNF155
PDSS2