ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TNFAIP2
SLC6A2
GALNT16
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
GLDN
PPP5C
UBXN10
NRSN1
KIAA0319
FBXW2
HOXC4
SEMA5B
GPR68
ZSCAN31
TOMM40L
APOA2
PIH1D1
ALDH16A1
TIAM2
KATNB1
OLFML2B
LPIN1
PRR13
STRN3
AP4S1
DRGX
WIZ
GFRA3
SLC17A8
DIABLO
KCNAB2
GNL2
C6
RIMBP2
MTRNR2L2
MSH3
DHFR
ITGB5
SMYD3
SYBU
RMDN3
ABCA12
CMTM4
ZNF654
CGGBP1
SLC25A25
FAM163B
TLE3
TBX15
RAPGEF2
BFSP2
C1orf185
C1orf100
P2RX1
CPO
NCK1
LIMS1
DUX4
HOXC6
MFSD6
IGFBP5
CHD1
LENG9
GRWD1
SLITRK5
HES6
CITED2
VAV3
KCNK16
GDF11
GABRA1
C14orf180
ATG9B
ABCB8
TCF4
KBTBD11
GSX2
LRRC15
SLC12A3
ZBTB45
SULT1C4
CHCHD3
CENPF
CYTH3
EVI5L
PHF14
TSHZ2
TAS2R20
KL
PHLDB1
SLC7A14
PLEKHS1
IFT57
MACROD2
ELAVL4
PARVA
MECOM
ARFIP1
ILF2
ZBTB39
GGT1
NPTXR
MTRNR2L8
ADGRD1
KHDC4
PRKD3
ADCYAP1R1
HAPLN1
CRYBG1
FOXN4
ZNF488
ZZZ3
USP7
STON2
RSAD2
COMTD1
COX16
TNFRSF19
EXOSC2
KDM4B
GPR83
ATF3
PRKAG2
OPRM1
DNAJB8
PWWP2A
IQSEC1
MAD2L2
TFPT
PRPF31
MRPS14
EEF1AKNMT
VSTM2A
C3orf52
PRKAR2B
GJA5
NTN3
FAM161A
PHOX2B
EPRS1
TRIL
PPP3CA
RBKS
BABAM2
MTRNR2L1
PDZRN3
H3C15
H3C14
H2AC19
H2AC18
PLA2R1
ABAT
LOXL1
CCDC33
CDH18
MFSD12
CATSPER3
PLEKHA5
NRG1
TIMM44
CHRM3
PPM1A
TBX2
DAOA
SGIP1
CHD9
CHST6
NTN4
ZNF552
QSER1
DRD2
SEMA4B
TMEM60
PHTF2
SPINK5
SH3GLB2
TMOD1
SIRT4
SMAD9
HTR4
ZNF555
TUB
SUGP2
ARMC6
NSD2
ZNF510
CCNG1
PRKG1
LIMA1
RARB
MRPL28
VPS52
RPS18
IGDCC3
VSTM5
TBCC
MAP1LC3B
FBXO31
BICRAL
SRP14
COX7A2L
USP40
PSMC1
B3GLCT
ANKH
RAB39A
PHKB
ITFG1
NEMP1
DIPK1A
MAPK13
RNF4
RHBDD1
PLXNA1
SYNE3
SLC31A2
FDPS
CEP152
ARL14EPL
MTA1
GGCT
DIXDC1
MGAT4C
GOLGB1
DLX6
PAFAH1B2
RAB11B
KIF26A
ZFPM2
LYN
INTS4
RIC8B
PCOLCE2
ITSN1
CRYZL1
FAM219A
DNAI1
AFF3
TOM1
SLC17A2
HOXA6
HOXA3
SLAMF8
PBX3
ID4
ZFAND6
PLAC1
ASNSD1
ASDURF
PMVK
ASB8
ICA1
UTS2R
RAPGEF3
MPP4
ASF1B
KCNK15
AOPEP
ACVR1
PRR25
ANKHD1-EIF4EBP3
ANKHD1
WNK1
ITM2C
RET
KNL1
KHSRP
EFCAB6
CP
SLC18A1
HEBP2
PDCD1
ZNF667
BAMBI
RGS4
CARS1
RP1L1
PSMB2
TMEM126B
DLG2
APMAP
TBC1D4
ZNF350
MEX3B
RUFY3
CALM2
HEXIM2
BEND4
SH2D3C
BCL9L
TUBG1
RETREG3
ARID5A
GALK1
RBM25
TCERG1
RMDN2
NOMO3
NOMO1
TPM1
BAHCC1
DHRS2
SNAP23
MN1
PWWP3A
SORL1
AMMECR1L
MTHFSD
ADGRE5
TPGS1
RNF145
FRMD3
SELENBP1
UHMK1
C3orf38
ADAMTS19
RABGAP1L
PRRC2B
PODN
DPH2
CYP8B1
ATP6V0B
NGDN
ZNF132
TIGD6
LINGO1
HMGXB3
FAM107B
RAB14
GSN
DBH
RACGAP1
ASXL2
FOCAD
TTC12
PRPF4
CDC26
TMEM79
SMG5
SLC35B4
ALG10B
MFSD8
MAP2
GCSAM
ABHD18
PIGM
ESRRB
SUPT7L
SLC4A1AP
RBM15
RBM12
CPNE1
IGFBP3
CLASP2
RNF24
VEPH1
NFYC
COL21A1
RAB31
ABT1
GBA
CTDSP1
LSMEM1
DGKB
SARS1
MOV10L1
TUBB1
GP5
PSENEN
LIN37
KCNJ3
ULBP3
ZSWIM4
SNX7
PSMD6
MARCKS
CAMK4
MLC1
SORT1
DCLK3
SYNPO
RPP25
KRT19
FCF1
CREBL2
CAND1
AREL1
AHCYL1
PC
NT5C2
FLYWCH2
ERCC6L2
DPP9
CYP51A1
MTA3
KCNG3
FOXP1
FRG2
FILIP1
PTPDC1
NUMB
XAB2
SHC1
PCP2
FLAD1
CKS1B
NME7
ISLR2
BLZF1
ANO6
RASGRP1
COG3
CALCOCO1
ZNHIT3
THRAP3
TDRD9
MC4R
EIF3D
BAX
ATP5MPL
RPS7
PRKAB2
CHD1L
ARL17B
ARL17A
ANTXR2
AGTR1
SRPK2
MRPL27
EME1
TUBB2B
TNS1
POGZ
CDIPT
CASQ1
ZBTB40
EHD4
PRUNE2
KCNAB1
AKAP11
E4F1
ARID5B
MKKS
WASHC1
CCDC89
TJP2
PXYLP1
PDE4D
PDE3A
NECAP1
TRAF3IP3
ASB6
TPCN1
WDR74
NOM1
CERKL
WNT5A
FRG2C
WAC
STYX
HES1
CRYGB
CLDN4
ARL15
AMOT
ZMYND8
TMCO5A
TLX3
SKA2
PRR11
CNOT3
ZNF608
NDUFB5
MRPL47
DPP8
DACH1
SLC36A4
SLC26A7
NOMO2
B3GNT3
UBL4B
PSME3IP1
FGF14
CFAP69
ARHGEF3
ICE1
METTL7A
C12orf43
ZNF566
TFAP2A
PRRT4
PCSK6
CHST12
SLC41A2
NUF2
MYT1
IRF2BPL
USF1
RPL27
LSM5
CYTH1
AVL9
AGL
SSRP1
P2RX3
STARD13
INAFM2
GABRR1
CCDC59
PTBP2
WDR89
PGM2
ERMAP
RIMS2
LCN9
HAND2
ZFYVE26
TFB2M
RAD51B
GNA12
CYP19A1
CNST
TRUB2
TMEM245
CUX2
COQ4
CEP41
UBE2V1
TUBA1C
TOMM40
SNX6
BCAS2
STUM
PCDH15
MYL10
HERPUD1
GNG12
COPS7A
EML4
DAB2IP
B3GNT4
B3GALT2
TMBIM6
SLC44A3
RPS26
VLDLR
STRA6
MDM4
LARP1
PTPRE
RFT1
ZNF749
HAGH
FAHD1
CPN2
POLR1H
COL5A2
LOC283710
FOXN3
THEMIS
PAXBP1
OSBP2
MRTFA
MLLT3
COX7C
CSDE1
SRRD
HPS4
SULF2
RPRD2
PTBP1
PRSS41
PKD1L1
ACSS2
MIA3
MAP2K4
INTS5
SERP1
EIF2A
ZNF417
SMAD1
HS3ST5
H2BU1
H2AW
VIPAS39
GRAMD1B
CCDC9B
AHSA1
SEL1L
PDIA6
EYS
BLOC1S6
ALG10
ZNF317
WWOX
TUFM
SH2B1
RFTN1
RBFOX2
TRIOBP
SEPTIN11
REX1BD
MRPS33
KCNH2
FAM13B
TDRKH
KRT13
KDM7A
POLR3E
MORC3
NEURL1
HPS3
WDPCP
TMEM100
ELMO1
DCC
BAZ2A
RGMB
HNMT
TAGAP
SPSB3
OSBPL6
MATR3
TMEM101
FBXO34
COG7
ATP2B4
ZNF148
UTP25
ZCCHC8
TPD52
SUGT1
ZNF331
SLC8A1
DDX41
ZIK1
TNNT2
STAMBP
SP2
SF3B6
HAPLN2
FAM228B
WDR46
STK11
PFDN6
PCBD1
P2RY6
TBL1X
SFRP4
GNRH1
EPDR1
DDX49
COPE
ZNF226
VPS72
RBL2
PALB2
FZD6
DCTN5
TCTN3
PPP6R1
HDAC9
GPRC5A
RNF224
PRL
PABPN1
G3BP1
CYSRT1
C15orf62
AKAP6
SHD
MRPL34
DDA1
WBP4
SLX4IP
ELF1
CCDC130
KCNT2
TM9SF4
SEMA3C
GPR107
CLDN15
CARD8
C12orf73
ANXA2
UBE2S
LOC100289561
LARS1
TXNRD1
PAM
UBA5
PHF19
MAP1B
ZNF227
ZBTB2
TSNAXIP1
SLC26A2
RANBP10
FREM1
CENPA
ABCC5
SDR39U1
SDE2
MSRB2
KCNMB2
H4C3
H1-6
BCHE
PRMT5
GAST
SH2B2
RNF14
DHX16
CNOT1
ZSCAN32
ZNF174
YJU2
TRMT61B
SNX22
MRPL44
HNRNPL
CCDC146
ATP5MF-PTCD1
ATP5MF
ARID1A
ZNF548
TSPAN8
H2BC6
DMAC1
ZFHX4
TSC1
STX6
SELENOW
PRKCSH
GFI1B
CCDC151
ZMAT2
STK32C
PLXNB2
LUC7L2
LRRC27
HNRNPA1
FMC1-LUC7L2
FMC1
FAM98B
CBX5
STK11IP
RHOB
RBM28
PTGER2
IRF2BP2
ETS2
ZNF225
TOMM70
SPATC1L
RAD52
NFATC4
NCS1
LNP1
BANP
GLE1
FRA10AC1
OIP5
NUSAP1
LBR
STT3A
ADNP
ZMYM1
TMEM94
PHB2
OSBPL9
HIC2
BCL2L13
WDR91
SYT15
RAB30
JMJD1C
ETFBKMT
CSMD3
BTG2
ATF6
ARMH3
RAG1
PACSIN3
GPR1
CCDC38
ATP5MC3
AMDHD1
ZNF264
SECISBP2L
MYT1L
HTR3B
EIF3F
ANKRD40
TP53BP1
PSMD3
TECTA
DPP6
BDNF
AUH
VEZF1
VPS45
PRICKLE1
COA1
CEP85L
SUFU
SLC39A9
ERH
DLC1
ACTR1A
ZNF229
RTRAF
PES1
OSBPL1A
ITFG2
VPS29
USP54
RAD9B
OAF
MARS1
CYP20A1
CRYBG3
ARHGAP9
RAB11A
LCN6
JARID2
TMEM231
RAB27A
PNISR
TTC31
MRPS23
MIDEAS
CCDC142
ATP5MC2
TNRC6B
LCT
GRIK4
TMEM232
PPIL1
C6orf89
SNX17
SETD1B
RBP5
OTOGL
MTFP1
MRPL3
EIF2B4
CLSTN3
BHLHE22
APOLD1
WDR36
GLIPR1L1
CAPS2
CAPN10
ZSWIM3
SETD9
MBNL1
ACOT8
FKBP3
FANCM
EPHX1
ARNT
TMEM69
IPO4
GPBP1L1
DST
BAZ1B
ATP5F1B
SCAF4
EIF2B2
CEP120
C5orf63
NFATC2IP
MRPL54
MAST4
APBA3
SF3B5
NDUFB3
MYL6
MED25
LRGUK
LNX1
FUZ
FBXO7
FAM126B
CDK12
ZMAT4
TTR
RAB5B
PPP1R12C
CEP128
ZNF484
TAMALIN
PDCL
MYO18B
LDLRAD4
HRK
RPS11
RBBP5
MRPL24
EHBP1
COX20
C7orf50
ASPM
ZNF304
ZBTB25
TBRG4
SSBP1
KLHL20
ERGIC2
SPRY4
PHB
MBIP
KRR1
WBP11
TMEM259
POLR2J3
LUM
CNN2
CBFA2T2
C12orf60
RAB3C
MSTN
KLF5
ZNF792
TYRO3
SEC22B
MYO1B
DPYSL5
AP2S1
PARP1
IGFBPL1
CNIH4
TAF5
ID2
GSK3A
SPAG9
SLC48A1
SLC37A3
RTN4IP1
QRSL1
C19orf67
ZNF668
ZNF646
NDUFAF5
MICU1
ESF1
SREK1IP1
LMAN1L
LITAF
ENDOG
DUSP6
CWC27
CREM
B3GAT1
NUTM2E
GALNT14
PNKD
AAMP
RBM48
PTH2R
PEX1
MAP3K4
GTF2H4
GRAMD4
CUEDC1
CREB5
CLDN12
C14orf93
ZBTB38
TBPL1
SMARCD2
CALM1
SOX4
NAA16
MVB12A
KCTD5
NSD3
LETM2
WBP1L
NAPSA
DHRS3
C2orf83
BCAR3
ANGEL2
TTC8
TCP1
SEMA6D
MRPL18
ITM2B
CAMTA1
YARS2