ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HOXC9 | Average
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◣ HOXC9: Average

◢ SRX111320: BE(2)-C

◢ SRX111321: BE(2)-C

◢ HOXC9: STRING

DEPP1
NRL
DCAF11
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
PPP5C
KIAA0319
HOXC4
SEMA5B
ZSCAN31
TOMM40L
PIH1D1
TIAM2
KATNB1
PRR13
DRGX
GFRA3
SLC17A8
DIABLO
RIMBP2
MTRNR2L2
ABCA12
ZNF654
CGGBP1
SLC25A25
RAPGEF2
C1orf185
KCNAB2
HOXC6
CHD1
LENG9
GRWD1
GABRA1
ABCB8
ZBTB45
CHCHD3
CENPF
EVI5L
PHF14
TAS2R20
ELAVL4
ILF2
MTRNR2L8
KHDC4
ZNF488
STON2
COX16
TNFRSF19
PRKAG2
PWWP2A
TFPT
PRPF31
MRPS14
EEF1AKNMT
FAM161A
EPRS1
H2AC19
H2AC18
ABAT
CCDC33
MFSD12
TIMM44
TBX2
CHD9
TMEM60
PHTF2
SIRT4
ZNF555
SUGP2
ARMC6
ZNF510
CCNG1
MRPL28
VPS52
RPS18
VSTM5
USP40
PSMC1
RAB39A
NEMP1
RNF4
RHBDD1
SYNE3
FDPS
MGAT4C
GOLGB1
DLX6
PAFAH1B2
RAB11B
INTS4
RIC8B
ITSN1
CRYZL1
TOM1
HOXA3
ID4
ASNSD1
ASDURF
PMVK
ASB8
MPP4
ASF1B
AOPEP
ACVR1
ANKHD1-EIF4EBP3
ANKHD1
KHSRP
EFCAB6
CP
SLC18A1
PDCD1
RGS4
RP1L1
TMEM126B
DLG2
ZNF350
RUFY3
CALM2
SLC17A2
HEXIM2
SH2D3C
TUBG1
RETREG3
RBM25
TCERG1
RMDN2
NOMO3
NOMO1
MN1
PWWP3A
ADGRE5
TPGS1
UHMK1
C3orf38
RABGAP1L
PRRC2B
DPH2
NGDN
ZNF132
GSN
DBH
SMG5
ALG10B
MFSD8
ABHD18
PIGM
ESRRB
SUPT7L
SLC4A1AP
RBM12
CPNE1
VEPH1
NFYC
ABT1
GBA
LSMEM1
SARS1
LIN37
ULBP3
ZSWIM4
MLC1
TCF4
FCF1
CREBL2
CAND1
AREL1
FLYWCH2
ERCC6L2
MTA3
XAB2
ANO6
COG3
CALCOCO1
ZNHIT3
MC4R
EIF3D
BAX
RPS7
SRPK2
MRPL27
EME1
CDIPT
ZBTB40
EHD4
AKAP11
E4F1
CCDC89
PDE4D
WDR74
HES1
ARL15
SKA2
PRR11
ZNF608
NDUFB5
MRPL47
NOMO2
MAP2
CFAP69
ARHGEF3
ICE1
C12orf43
ZNF566
MFSD6
NUF2
MYT1
USF1
RPL27
LSM5
CYTH1
CCDC59
WDR89
HAND2
ZFYVE26
TFB2M
CNST
TRUB2
TMEM245
COQ4
CEP41
TOMM40
SNX6
BCAS2
STUM
PCDH15
GLDN
COPS7A
DAB2IP
TMBIM6
RPS26
VLDLR
STRA6
MDM4
PTPRE
ZFAND6
RFT1
ZNF749
HAGH
FAHD1
POLR1H
COL5A2
FOXN3
PAXBP1
COX7C
CSDE1
RPRD2
PTBP1
MIA3
MAP2K4
INTS5
SERP1
EIF2A
ZNF417
VIPAS39
GRAMD1B
AHSA1
SEL1L
EYS
BLOC1S6
ALG10
ZNF317
WWOX
TUFM
SH2B1
TRIOBP
TDRKH
KRT13
POLR3E
MORC3
ELMO1
BAZ2A
HNMT
SPSB3
MATR3
KCNH2
FBXO34
COG7
ATP2B4
ARL17B
ARL17A
ZCCHC8
SUGT1
ZNF331
SLC8A1
DDX41
ZIK1
TNNT2
STAMBP
SP2
SF3B6
FAM228B
WDR46
PFDN6
P2RY6
FOXP1
TBL1X
GNRH1
DDX49
COPE
ZNF226
RBL2
PALB2
DCTN5
TCTN3
PPP6R1
GPRC5A
PABPN1
C15orf62
UTP25
SHD
DDA1
SLX4IP
CCDC130
KCNT2
TM9SF4
SEMA3C
CLDN15
CARD8
C12orf73
UBE2S
LOC100289561
LARS1
TXNRD1
UBA5
ZNF227
TSNAXIP1
RANBP10
FREM1
CENPA
SDR39U1
KCNMB2
H4C3
BCHE
PRMT5
HDAC9
DHX16
CNOT1
ZSCAN32
ZNF174
YJU2
TRMT61B
MRPL44
HNRNPL
CCDC146
ATP5MF-PTCD1
ATP5MF
ZNF548
TSPAN8
H2BC6
DMAC1
ZFHX4
TSC1
SELENOW
GFI1B
ZMAT2
LUC7L2
HNRNPA1
FMC1-LUC7L2
FMC1
FAM98B
CBX5
STK11IP
RBM28
ZNF225
SPATC1L
RAD52
NFATC4
LNP1
FRA10AC1
OIP5
NUSAP1
STT3A
PHB2
OSBPL9
RAB30
JMJD1C
ATF6
ARMH3
GPR1
CCDC38
ATP5MC3
ZNF264
SECISBP2L
MYT1L
EIF3F
ANKRD40
TP53BP1
SYBU
PSMD3
CNOT3
SULT1C4
PLXNB2
DPP6
BDNF
AUH
VPS45
PRKAB2
CHD1L
CEP85L
SUFU
SLC39A9
ERH
ACTR1A
ZNF229
RTRAF
PES1
ITFG2
VPS29
RAD9B
MARS1
ARHGAP9
RAB11A
LCN6
JARID2
TMEM231
PNISR
TTC31
MRPS23
KNL1
CCDC142
ATP5MC2
TNRC6B
PPIL1
SNX17
RBP5
MRPL3
EIF2B4
CLSTN3
APOLD1
WDR36
GLIPR1L1
CAPN10
ZSWIM3
MBNL1
ACOT8
FANCM
ARNT
TMEM69
METTL7A
IPO4
GPBP1L1
ATP5F1B
CEP120
C5orf63
NFATC2IP
MRPL54
MAST4
BANP
APBA3
SF3B5
MYL6
LRGUK
FUZ
CDK12
TTR
RAB5B
PPP1R12C
CEP128
ZNF484
TAMALIN
PDCL
RPS11
RBBP5
MRPL24
HS3ST5
COX20
ASPM
ZNF304
TBRG4
SSBP1
KLHL20
ERGIC2
SPRY4
PHB
MBIP
KRR1
TMEM259
POLR2J3
LUM
CBFA2T2
RAB3C
MSTN
AP2S1
PARP1
CNIH4
TAF5
GSK3A
SPAG9
RTN4IP1
QRSL1
ZNF668
ZNF646
NDUFAF5
ESF1
SREK1IP1
LITAF
ENDOG
DUSP6
CWC27
NUTM2E
GALNT14
ZNF552
PNKD
AAMP
RBM48
PEX1
GTF2H4
GRAMD4
SMARCD2
DPP9
SOX4
MVB12A
KCTD5
SEC22B
LETM2
WBP1L
ANGEL2
TCP1
SEMA6D
MRPL18
CAMTA1
YARS2
GGTA1
RASA3
MMACHC
GPR85
CCDC163
SP1
SHPRH
RC3H2
FAM126A
OGFOD1
NUDT21
STC1
SSUH2
PRCC
PPIL3
NIF3L1
B4GAT1
DPYSL2
DLC1
CWF19L2
PIP4P1
ACTR6
ZNF805
CCDC90B
USE1
TRMT12
MED16
TUT1
MRTFB
ZNF473
VRK3
QDPR
FDXR
SYNJ2BP-COX16
SYNJ2BP
MPV17L2
AP3M2
SF1
CAPS2
SRFBP1
AP1M1
ANKRD54
THUMPD1
ZNF493
SLC41A3
SIX3
SIRT2
NFKBIB
TMEM160
RABEPK
NIP7
COG8
WRN
SIX4
RPL6
MVK
RIMS2
LINS1
ASB7
PPP1R3D
FAM217B
PHF5A
OS9
MSANTD4
DDC
ACO2
ZNF565
ZNF146
PRUNE2
CCNT1
SFR1
SPART
SEC31B
ZNF776
YAF2
SLC4A2
MRPS15
HAO1
CSRP1
CLDN11
CDK5
BUB1B-PAK6
ZSCAN9
CUL2
ANAPC15
KIF3B
ZNF430
MRPS33
BUB1B
ZNF106
TRMT1
RAD51AP1
PEF1
NCAM1
FEM1A
C12orf4
YLPM1
TNRC18
RPS27
POLG
DNM2
CMTM2
PSMD1
FAM214A
ZSWIM8
ZNF790
SLC16A14
PAF1
BBX
SPRING1
RNFT2
SNRPE
SECISBP2
LPAR5
RALGAPA1
LGALS8
UBE2J1
TRAF7
CNPY2
RPS5
CLASP2
TMEM167B
GPR108
FOCAD
ADAMTS17
CFAP20
CEP126
NPY2R
KIFBP
RPTOR
PGBD4
MEIG1
EMC7
ZNF629
TSPAN3
RBM8A
NABP1
DHX8
ZNF302
ZKSCAN5
SBDS
ATXN7L3B
ADAMTS5
OPA1
LRRTM3
CHAC1
TMEM106B
BRMS1L
ZNF155
SIPA1L2
RUVBL2
JPT2
GYS1
CYP19A1
ANP32E
ZNF25
CCDC9B
RHOB
BCAS3
ALK
ZNF169
SART3
ISCU
CIZ1
SLC25A16
SPAST
EXOSC2
EHMT2
C2
RTTN
RPF1
PEX3
HOMEZ
ETFBKMT
CLPB
ATG2A
ADAT2
ZNF586
OGDH
NUDT13
DCAF15
C10orf88
ZNF263
ABHD16A
TACO1
STAT3
SMC4
IFT80
FAM220A
SMG7
SCHIP1
RPAP1
PXMP4
MAB21L2
EYA1
CDKAL1
CDC25C
OTUB2
MXI1
ZC3HC1
GTSE1
BTN3A1
THOC5
ZNF234
ZC3H11A
TOX4
TAF1A
SLIRP
RAB2B
PIF1
ALKBH1
ZNF777
WDR12
THAP4
SHC4
MPND
CARF
ZSCAN12
ZNF503
TXNL4B
SEPHS2
N6AMT1
GATAD2B
FBXW7
DHX38
ZNF682
RPL38
PPRC1
LONP1
EPHB3
CATSPERD
ADAMTSL2
ZBTB18
VPS25
UBE2F
TLR7
SURF6
ELOC
COPS4
ANKRD17
ZNF821
YIPF4
SHF
ROCK2
MSH3
HP1BP3
DHFR
CHRM5
TXN2
TRIM24
SEC14L1
PHF12
PAPOLA
GALK2
FAAP24
COPS2
CEP89
TMCO1
SMG8
RFX3
HDGFL2
CHD8
ZNF773
ZBTB3
PSMD8
NDUFAF1
HIKESHI
CCDC86
UBP1
PLEKHM3
ZNHIT1
ZNF614
RBMS2
PLOD3
PLA2G6
ISY1-RAB43
ISY1
GOSR2
EMC4
EAPP
DUT
UFD1
SF3A3
PSMB4
MYH15
LRRC17
HIBADH
CDC45
ZMAT4
PRPH
NVL
ARHGAP24
UBR2
MIOS
DNM1L
USP54
TYK2
RNF6
POP5
LMAN2
HNRNPUL1
ZNF687
ZKSCAN3
SIKE1
OGFOD2
HOXD3
ATF3
ZNF738
ELL
COQ7
CHKB
SPRED1
NFIB
DNAL1
CLN3
VPS41
SYMPK
NSUN3
DHFR2
COTL1
NLGN1
MADD
BPNT1
ZKSCAN4
UBB
PAN2
NDUFS4
LRWD1
IKZF4
FUBP1
FNDC3A
FHL2
FAM222B
DNAJB4
CGAS
ALKBH4
STX6
SMIM30
POLRMT
NDUFB3
KBTBD8
GPR180
FAM126B
DESI2
CDK5RAP1
AP3B1
THADA
SLC35B1
PRKCE
GMPPA
ANGPT2
ZNF726
VPS50
RPL23
RBM19
PIK3CA
PEX12
MRPS22
LRRN3
KLHL25
HEPACAM2
ETV5
DNAJC25-GNG10
DNAJC25
ZNF627
SLC1A5
RERE
RALGAPB
POC1B-GALNT4
PMPCB
HPGDS
HMGCR
ZNF230
RBFOX2
RAB8A
KDM3A
EPS15
CIAO2A
CCDC61
AQP10
ZNF785
ZNF737
TAFA2
NUP58
BTN3A3
ZNHIT6
YOD1
UTP11
STEAP3
SDHD
SCNM1
RPL3
PROSER1
PFKFB2
PARS2
NHLRC3
MED18
LYSMD1
KDM5C
RPL24
RNF150
NDUFB7
MFSD14C
DYNC2I1
C15orf40
BAIAP2
ADAMTS1
ZNF789
SLC25A44
PTRHD1
GSTA4
CENPO
CDK17
ZNF92
TUBB4B
SGTA
PCBP2
NUP205
ETNK1
YME1L1
YIPF2
TPR
TIMM29
STK16
ODR4
IFT27
HTR1A
GLB1L
FCHO1
ETV1
DNAL4
UTP3
SPHK2
RPL18
POLL
NFIA
GOLPH3L
EIF1AD
DPCD
BANF1
ZNF74
ZNF419
UBQLN4
PYROXD1
LAMTOR2
GTPBP3
DNAJC14
DIS3L2
CD63
WDR70
SETD1B
RBM18
PDCD7
MRRF
LCA5
GRPEL1
FFAR3
DUS3L
ATP7B
ALG11
ZNF688
TTC37
TOR1A
SLC30A10
FTCDNL1
CHD6
ARSK
ZNF793
WDR83OS
WDR83
TOB2
PSMD9
PPIP5K2
NR2F1