ChIP-Atlas: Target genes

Potential target genes for HOXC9

Query protein: HOXC9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX111321 | BE(2)-C
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
HOXC9's Target genes

◢ HOXC9: Average

◢ SRX111320: BE(2)-C

◣ SRX111321: BE(2)-C

◢ HOXC9: STRING

NRL
DCAF11
DEPP1
TBC1D10B
MYLPF
HOXC5
NDUFS8
SCML4
ING3
ZSCAN31
KIAA0319
SEMA5B
PRR13
HOXC4
TOMM40L
SLC25A25
KATNB1
PIH1D1
SLC17A8
PPP5C
RIMBP2
ZNF654
CGGBP1
DIABLO
C1orf185
GFRA3
MTRNR2L2
CENPF
TIAM2
GRWD1
GABRA1
ABCA12
DRGX
RAPGEF2
LENG9
PHF14
KCNAB2
ELAVL4
CHD1
HOXC6
ZBTB45
ABCB8
CHCHD3
TNFRSF19
COX16
TAS2R20
KHDC4
STON2
EVI5L
ZNF488
TFPT
PRPF31
SYNE3
VPS52
RPS18
MTRNR2L8
EEF1AKNMT
ABAT
H2AC19
H2AC18
RAB11B
PWWP2A
MPP4
DLX6
ZNF350
MFSD12
MFSD8
ABHD18
ZNF510
RGS4
TIMM44
AOPEP
SIRT4
USP40
PRKAG2
RAB39A
RIC8B
KHSRP
SH2D3C
PAFAH1B2
ZNF555
ACVR1
GOLGB1
PMVK
CCNG1
RMDN2
MRPS14
CHD9
CP
ABT1
EFCAB6
RNF4
ITSN1
CRYZL1
HEXIM2
PWWP3A
CAPN10
ANKHD1-EIF4EBP3
ANKHD1
SLC17A2
ZNF608
ASNSD1
ASDURF
LSMEM1
NEMP1
TOM1
TMEM126B
DLG2
GSN
EPRS1
PSMC1
FDPS
TCERG1
TBRG4
NOMO3
NOMO1
TMEM60
PHTF2
ILF2
CALCOCO1
EIF3D
MRPL28
XAB2
HOXA3
ZNF132
VEPH1
LIN37
PDCD1
PRRC2B
DBH
TBX2
SUGP2
ARMC6
MC4R
TCP1
MRPL18
VSTM5
SLC18A1
RHBDD1
ASF1B
DPH2
MRPL27
EME1
TPGS1
SPSB3
AKAP11
ARHGEF3
FLYWCH2
RPS7
MDM4
STAMBP
GBA
ZSWIM4
C3orf38
CAND1
FAM161A
BAX
ZNF566
AP1M1
ADGRE5
FCF1
CREBL2
AREL1
EHD4
GPRC5A
ZNF749
PTBP1
WRN
RUFY3
MN1
NGDN
RIMS2
RABGAP1L
ANO6
SNX6
NFYC
CCDC33
NDUFB5
MRPL47
ZNHIT3
RPS26
CCDC59
SDR39U1
TCF4
DDX41
CCDC38
UHMK1
TXNRD1
CCDC130
POLR1H
ZNF417
HES1
INTS4
ESRRB
PDE4D
GRAMD1B
ZNF430
ZBTB40
ID4
SRPK2
UBA5
YLPM1
TNRC18
SEL1L
TDRKH
FAM214A
LRGUK
BBX
ZSCAN32
ZNF174
USF1
ULBP3
CFAP69
CEP41
LPAR5
RP1L1
LGALS8
UBE2J1
TRAF7
CNPY2
RBM25
MFSD6
ZFYVE26
CCDC89
SKA2
PRR11
GPR108
FOCAD
E4F1
MYT1
RPL27
FOXN3
COX7C
CFAP20
ALG10
UBE2S
SPATC1L
CYTH1
DHX8
ALG10B
PALB2
DCTN5
LRRTM3
CHAC1
POLR3E
SLC8A1
C12orf73
GLDN
FBXO34
WDR46
PFDN6
CNIH4
JPT2
ICE1
PABPN1
C15orf62
CNOT3
METTL7A
ZNF25
CALM2
RBM12
CPNE1
ERCC6L2
SERP1
EIF2A
TUFM
SH2B1
COG7
ZNF226
RHOB
BCAS3
MTA3
HNMT
ARL17B
ARL17A
KCNT2
CARD8
DMAC1
ASB8
DDA1
SLC25A16
C12orf43
KCNH2
SF3B6
FAM228B
BAZ2A
CEP85L
EHMT2
C2
HAND2
PTPRE
ZNF331
ANKRD40
HOMEZ
ETFBKMT
ZNF586
DCAF15
KCNMB2
COX20
ABHD16A
COG3
ELMO1
PRMT5
PARP1
PXMP4
CDKAL1
CDC25C
FOXP1
LARS1
AUH
OTUB2
MXI1
GTSE1
BTN3A1
COPS7A
TRMT61B
THOC5
MLC1
MIA3
WWOX
PHB2
ZNF234
ZC3H11A
TAF1A
SLIRP
ALKBH1
VIPAS39
AHSA1
UTP25
ZNF227
RBP5
CLSTN3
SHC4
TUBG1
RETREG3
NOMO2
VLDLR
ZFAND6
RAB30
KNL1
ZNF503
TXNL4B
SEPHS2
DHX38
MGAT4C
TOMM40
TRIOBP
SP2
TP53BP1
ZNF682
LONP1
CATSPERD
ADAMTSL2
WDR74
STRA6
CDK12
SURF6
CDIPT
LOC100289561
CENPA
CNOT1
VPS45
YIPF4
HP1BP3
SARS1
DAB2IP
SELENOW
TRIM24
SEC14L1
PHF12
FAAP24
CEP89
SUPT7L
SLC4A1AP
BDNF
SMG5
RFT1
MAP2K4
INTS5
ZNF548
JMJD1C
RTRAF
TMEM231
TTC31
CCDC142
MVB12A
ZNF773
ZBTB3
PSMD8
HIKESHI
CCDC86
SUGT1
GSK3A
UBP1
WDR89
ZNF317
H2BC6
STK11IP
TNRC6B
ZNHIT1
RBMS2
PLOD3
DUT
HAGH
FAHD1
SLC39A9
ERH
MBNL1
MYH15
HIBADH
SLX4IP
MAST4
DPP9
ARHGAP24
MAP2
RPRD2
PPIL1
PRCC
MIOS
SHD
USP54
TYK2
POP5
HNRNPUL1
MATR3
RBL2
RAB11A
C5orf63
ZNF687
SIKE1
SNX17
EIF2B4
RAB5B
ZNF738
COQ7
PIGM
TMBIM6
LNP1
ZSWIM3
ACOT8
MYL6
FUZ
TAMALIN
ERGIC2
POLR2J3
EYS
ZFHX4
RAD52
SYMPK
NSUN3
DHFR2
ATP2B4
ZNF225
ZNF264
DPYSL2
KRT13
TSPAN8
RBM28
LCN6
MRPS23
MMACHC
CCDC163
ZKSCAN4
PAN2
FNDC3A
FAM222B
TM9SF4
TAF5
SEC22B
WBP1L
SMIM30
NDUFB3
FAM126B
DESI2
COL5A2
ZCCHC8
YJU2
ATP5MC2
GALNT14
THADA
YARS2
RPL23
RBM19
PIK3CA
KLHL25
ETV5
P2RY6
OSBPL9
SUFU
ACTR1A
VPS29
RAD9B
ASPM
ZNF627
TCTN3
ZMAT2
MARS1
ARHGAP9
SPAG9
BCAS2
CSDE1
STT3A
ATF6
BANP
DUSP6
MPV17L2
ZNF785
TAFA2
NUP58
BTN3A3
ARL15
BLOC1S6
HNRNPA1
CBX5
MRPL3
GLIPR1L1
CEP128
UTP11
SDHD
NUF2
TNNT2
DDX49
COPE
SEMA3C
PRKAB2
CHD1L
RNF150
BAIAP2
MSTN
SREK1IP1
CWC27
PNKD
AAMP
ZNF789
SLC25A44
CDK17
LSM5
STUM
CCDC146
SIX4
ZNF92
TUBB4B
ETNK1
TRUB2
COQ4
CLDN15
GTF2H4
RASA3
TRMT12
SLC41A3
YIPF2
TIMM29
IFT27
HTR1A
FCHO1
NFATC4
ZNF668
ZNF646
EIF1AD
BANF1
GNRH1
SF3B5
NUTM2E
RBM48
PEX1
USE1
RABEPK
ZNF419
UBQLN4
LAMTOR2
GTPBP3
DIS3L2
CD63
TSC1
GFI1B
SECISBP2L
ZNF484
LETM2
TMEM160
WDR70
SETD1B
RBM18
PDCD7
MRRF
GRPEL1
FFAR3
DUS3L
ATP7B
ALG11
H4C3
FAM98B
SULT1C4
PLXNB2
PES1
FANCM
MRPL24
PHB
ZNF688
SLC30A10
CHD6
PCDH15
ATP5MF-PTCD1
ATP5MF
FRA10AC1
ZNF229
CBFA2T2
ENDOG
CCNT1
TOB2
HOXB8
GARS1
ACTB
ABLIM1
ITFG2
ARNT
GRAMD4
PPIL3
NIF3L1
MED16
MVK
ZNF26
TIMMDC1
SAPCD2
FOS
TSNAXIP1
RANBP10
JARID2
CCDC90B
TDP1
SMDT1
N4BP2L2
EFCAB11
ADPGK
BCHE
OIP5
NUSAP1
RPS11
SIRT2
NFKBIB
NIP7
COG8
PSMD1
LARP4
EFCAB2
ADD3
DPP6
TMEM259
PPP1R3D
FAM217B
CSRP1
BUB1B-PAK6
TROAP
SLC33A1
OXCT1
ERCC2
ZNF304
STC1
ZNF473
VRK3
SIX3
PRUNE2
ZNF384
FZD2
CELF3
ZIK1
MYT1L
TMEM69
GPBP1L1
SSBP1
B4GAT1
ZNF805
LINS1
ASB7
YAF2
ZNF324B
TAPBPL
SALL4
METTL3
LRIG2
TBL1X
EIF3F
NFATC2IP
TTR
OS9
DDC
UBXN2A
TUBD1
TPD52L2
TOM1L2
TNFAIP1
RPS6KB1
RBP3
PCNX4
MIEF2
MED30
LEO1
IFT20
H4C12
DRC3
ATAD5
ICAM2
CMC2
ATR
SPRY4
LITAF
SOX4
GGTA1
SRFBP1
PHF5A
ACO2
OGA
MMUT
GAN
CENPQ
PAXBP1
MRPL44
WDR36
LUM
ZNF552
SSUH2
HAO1
ANAPC15
RPS27
SLX1B
SLX1A
PARG
NHLRC4
BOLA2-SMG1P6
BOLA2B
BOLA2
TMEM245
PPP6R1
ANGEL2
NPY2R
SMIM18
SH3PXD2A
RPN2
PIK3R2
INO80D
COMMD4
APOLD1
CEP120
NDUFAF5
ESF1
KCTD5
DNM2
ZNF43
SLC35E2B
MIS18BP1
GOLGA6C
ANKRD54
USP30
H3-3B
GPR1
FAM126A
DLC1
ACTR6
HNRNPL
PSMD3
CAMTA1
MSANTD4
PAF1
KIFBP
SOS2
MCCC2
ERV3-1-ZNF117
ERV3-1
DLGAP5
CD2BP2
TEDC1
LTA4H
CTU1
CFAP251
TFB2M
CNST
HDAC9
SEMA6D
SYNJ2BP-COX16
SYNJ2BP
ZNF776
SNRPE
TLE4
LIN52
EPDR1
ALDH6A1
SYBU
PNISR
HS3ST5
GPR85
SP1
TUT1
CAPS2
RAD51AP1
C12orf4
TTF2
TMX2
TATDN3
PAFAH2
P4HB
NSL1
NDUFA5
MEIS2
MED19
LAMTOR1
KCNK2
GCDH
APH1A
ZNF12
NREP
MAP3K3
HEXIM1
H2BC4
H2AC6
FAM227B
FAM122A
DTWD1
CLEC16A
CEP78
BUB1B
ZNF433
SEMA3A
P2RX6
MALSU1
IFIT2
ELOVL6
DDX23
CCNB1IP1
SHPRH
FBXO9
CEP20
RTN4IP1
QRSL1
RBM8A
BRMS1L
RSPH4A
NUMA1
LRTOMT
GPATCH1
BRD2
TTC5
TOM1L1
METTL17
LCMT1
C22orf39
LUC7L2
FMC1-LUC7L2
FMC1
IPO4
RBBP5
RAB3C
PRH1-TAS2R14
MCM3
LMNTD1
H2BC12
H2AC12
KLHL20
KRR1
STK36
RNF25
PSMB7
CCT5
ATPSCKMT
MBIP
CEP126
TPP2
RRN3
NBEAL1
GRN
C16orf91
MORC3
FREM1
NCAM1
ZNF155
RSRC1
NUP133
H2BC15
H2AC15
ARMH3
PPP1R12C
FDXR
PEF1
FEM1A
ZNF736
SLC25A45
LIMCH1
FAM185A
ERCC5
EMC9
ARID4A
PGBD4
EMC7
NABP1
ZNF500
PRRC2A
NDUFS1
IVD
EEF1B2
DHX16
AP2S1
SEC31B
SLC26A7
RGS12
MYCN
ATP5F1B
TOMM7
SAMD8
POLQ
OTUD6B
CIC
PIP4P1
MRTFB
DDTL
DDT
ADARB1
ZNF565
ZNF146
RAG2
MCF2L
RPS5
RAI14
COX6A1
RC3H2
SNRNP70
SLC30A5
PHKG2
RAB3GAP2
CACYBP
C8orf37
ANP32E
ZNF875
PHPT1
DCAF7
RNF40
CEBPZ
CCDC189
ATP2C1
OGFOD1
NUDT21
RFX1
ZSCAN9
SPRING1
RNFT2
NRBF2
GON4L
CFDP1
POLG
ZNF790
KNTC1
IFT140
CRAMP1
QDPR
CATSPERG
WASHC3
COX7A2
B4GALT5
SHF
MDC1
RACGAP1
QPRT
MRPL54
APBA3
ZNF493
GADD45G
BAHCC1
SF1
SNRPB
RPL23A
PRDM10
DCAF1
GLRX
SARS2
MRPS12
KDM4D
CWC15
DDX46
TBCCD1
DNAJB11
TSEN34
MBOAT7
LGALS3BP
GOT1
ATP5MC3
PDCL
SMARCD2
CWF19L2
AP3M2
THUMPD1
RPL6
SFR1
SPART
SLC4A2
MRPS15
CLDN11
CDK5
CUL2
KIF3B
MRPS33
ZNF106
TRMT1
CMTM2