About This Database

Protein

Data description

Data name

Protein

DOI

10.18908/lsdba.nbdc01243-001

Description of data contents

It is a summaly table of protein information; such as sequences of mRNA and Amino acids, functions and metabolic pathways related to the protein. There is also information of candidate inhibitor of the protein.

Data file

File name :

trypanosome.zip

File URL :

https://dbarchive.biosciencedbc.jp/data/trypanosome/LATEST/trypanosome.zip

File size :

1.4 KB

Simple search URL

http://togodb.biosciencedbc.jp/togodb/view/trypanosome#en

Data acquisition method

Data analysis method

Number of data entries

17 entries

Data detail

Data item	Description
symbol	Symbol of the protein
name	Name of the protein
organism	Organism of the protein
mRNA sequence	GI number of the mRNA sequence (Link to the NCBI Nucleotide in the Simple search site)
protein sequence	GI number of the Amino Acid sequence (Link to the NCBI Protein in the Simple search site)
entrez	Gene ID (NCBI Gene)
uniprot	UniProt Accession number
wikipedia	Search term in Wikipedia
ec	Enzyme Commission number
omim	OMIM ID (Online Mendelian inheritance in Man)
map	Location of the gene on a chromosome or its chromosome number
pdb	PDB ID (PDBj: Protein Data Bank Japan)
kegg pathway	ID of the KEGG pathway
candidate inhibitor	Name of candidate inhibitor of the protein
drugport id	DrugBank ID of candidate inhibitor