Array patterns and clones

- Rice1265
Independent rice cDNA clones of 1265 ESTs were collected randomly. All of clones were generated by large scale cDNA analysis in RGP (rice genome research program).
 
- Rice8987 f_array
Our microarray with rice cDNA comprises a pair of glass slides. The microarray patterns are shown in the figure. On the pair of rice microarrays, there are independent 8979 cDNA clones that were selected from about 40,000 cDNA clones isolated in the first research stage of the rice genome research project. Field 12 is for pig ESTs as positive controls that do not.
 
- Rice8987 g_array
For all microarray experiments on and after July 1, 2002, second version of our rice microarray (called “g_array”) is used. The “g_array” carries the same 8987 cDNAs (with the full inserts) that the Rice8987 Array carries. However the location of each cDNA clone on “g_array” is different from that on the Rice8987 Array.

We fabricated a full insert cDNA microarray and a 3’UTR cDNA microarray. cDNA were applied as duplicate spots on the same glass slide. Blanks in the table (no name) mean that the clones with blank are not registered in DDBJ yet.

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