General information of database
|RGP: 332 PCR-based genetic markers on rice chromosomes|
2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
|Plant databases - Rice|
We have developed 332 PCR-based genetic markers including 161 sequence tagged site (STS) markers and 171 cleaved amplified polymorphic sequence (CAPS) markers.This site shows all information for these markers.
The table (chr 1 to chr 12) summarizes all information for STS and CAPS markers, such as chromosomal location, primer sequences, size of amplified fragment (Nipponbare), restriction enzyme, etc. These markers have been developed to detect polymorphism between Nipponbare (japonica) and Kasalath (indica). Although detection of polymorphism of these markers will depend on the combination of varieties or lines, they may be used for the analysis of other combinations.
Original website information