[Credits][Terms of service]

Life Science Database Archive
RED

EST data

Data detail

info Data name EST data
info DOI 
info Description of data contents 

Position information of the clone of Rice8987 Array on chromosomes.

 

info Data file 
File name:
red_est.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/red/LATEST/red_est.zip
File size:
629 KB
info Simple search URL 
info Data acquisition method 

-

 

info Data analysis method 

-

 

info Number of data entries 

9,216 entries

 

Data itemDescription
Element No(Glass) Element number (spotted position on the glass)
Clone name Clone name
Accession_01 DDBJ accession number (5')
Accession_02 DDBJ accession number (3')
Locus name Locus name
Chr type Chromosome number
EST cluster type Cluster type of EST
  • "D" : Mapping the clone sequences directly into the genome.
  • "G" : Mapping a representative clone sequences of similar sequences group into the genome.
Availability Availability
  • "true" : Available
  • "false" : Not available
3'UTR M /no check PCR products check (3'UTR)
  • "blank" : result match to the prediction
  • "no" : no band
  • "m" : multiband
Full insert M /no check PCR products check (Full inserts)
  • "blank" : Result match to the prediction
  • "no" : no band
  • "m" : multiband
Destination Plate Destination Plate number, which used for PCR check of the clone
Dplate Pos Posision on the Destination Plate used for PCR check of the clone
Mapped 3'UTR Primer seq (Upper) Mapped 3'UTR Primer sequence (Upper)
Mapped 3'UTR Primer seq (Lower) Mapped 3'UTR Primer sequence (Lower)
Unmapped 3'UTR Primer seq (Upper) Unmapped 3'UTR Primer sequence (Upper)
Unmapped 3'UTR Primer seq (Lower) Unmapped 3'UTR Primer sequence (Lower)
Putative Identification Putative Gene Identification