| 項目名 | 項目の説明 |
|---|---|
| Affy/Perlegen ID |
SNP ID given by Affymetrix or Perlegen |
| Chromosome |
Chromosome number that each SNP resides |
| Position |
Chromosomal nucleotide position (NCBI Build 35) of each SNP |
| Alleles |
Alleles |
| MAF |
Minor allele frequency |
| Genotypes |
Genotypes for the 74 CHM samples |
| LD bin |
Name of LD bin (Linked to LD bin list in Quick Search) |
| tagSNP |
The flag that indicates whether the SNP is a tagSNP or not.1: tagSNP0: non-tagSNP-: SNP not included in LD bin calculation (MAF<0.05) |
| Best tagSNP |
The flag that indicates whether the SNP is the best tagSNP or not.1: Best tagSNP0: non-best tagSNP-: SNP not included in LD bin calculation (MAF<0.05) |
| RefSNP ID |
RefSNP ID (rs number) given by dbSNP. (Linked to dbSNP in Quick Search) |