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項目名 項目の説明
RNA extraction

RNA extraction

Extract name

Internal ID

FF ontology

Ontology ID in FANTOM

Description

Description

Catalog ID

RNA catalog ID

Category

Category

Species

Species

Sex

Sex

Age

Age

Developmental stage

Developmental stage

Tissue

Tissue

Cell lot

Cell lot

Cell type

Cell type

Catalogue ID

Cell catalogue ID

Collaboration

Collaboration

Provider

Cell provider

Extraction protocol

RNA extraction protocol

Material type

RNA Material type

RNA tube

RNA tube ID (the same as Extact name)

Sample name

Sample name

RNA ID

Internal RNA ID

Comment on RNA

Comment on RNA

ratio_260/230

Ratio (260nm/230nm) of the sample

ratio_260/280

Ratio (260nm/280nm) of the sample

Concentration

RNA concentration

RNA Integrity number

RNA Integrity number

lsid

Sample group ID

Library protocol

Library protocol

Library ID

Library ID

Machine name

Machine name

Run name

Run name

Flowcell channel

Flowcell channel

Alignment protocol

Alignment protocol

BAI file

Index of BAM file

CAGE TSS file

TSS identified by CAGE analysis (BED format)

Barcode

Barcode sequence for RNA sample identification

Sequence protocol

Sequence protocol

BAM file

Read mapping results (BAM format)

Ribosomal DNA sequence file

rDNA sequence file (FASTA format)