dbQSNP ID.

ID of genomic contigs that showed highest homology to the STS (NT sequence, NCBI Build 36)

dbSNP accession for the refSNP (dbSNP Build 128)

sequence of allele 1

sequence of allele 2

allele frequency of allele 1

allele frequency of allele 2

ID of pooled DNA (see below, DNA samples were extracted from peripheral blood lymphocytes) "CAU200", prepared from Caucasian Panel of 200, obtained from CORIELL (HD200, https://www.coriell.org) was used as the Caucasian pool in a large part of this study. "CP" (combined CEPH parents, prepared by us from 45 CEPH core family collection) and "COP" (HD100 from CORIELL) were also used. "JSA426", prepared from DNA derived from apparently healthy individuals enrolled at Kyushu area was used as the Japanese pool in a large part of study. Other pools derived from healthy individuals enrolled at various area of Japan were also used. Those were; JPK, JPK2, JPK3, JCM253, NCEP, NCL_P, NCP269, NCE_SP and JNCL_SP. The allele frequency data of pools derived from breast cancer patients (BREP, BRLP, JBRE_SP, JBRL_SP) and pools derived from systemic lupus erythematosus patients (SLEP264, SLEP183), obtained in association studies of each diseases, are also included

The number of individuals in the pool

Orientation of the STS compared with contig sequence of GenBank (NT sequence, NCBI Build 36) . Note that SNPs are always described as sequences in forward strand of the STS.