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Life Science Database Archive
Arabidopsis Phenome Database

Plant phenotype

Data detail

info Data name Plant phenotype
info DOI 
info Description of data contents 

Phenotypes mentioned in the presented database, such as "long leaf", can be expressed as combinations of "entity" and "quality". Terms of entities and qualities are expressed with ontology terms, to standardize phenotype information. Entities: Names of organs, tissues, development stages. The vocabulary is defined in Plant Ontology(PO). Qualities: Characteristics, attributes of entities. The vocabulary is defined in Phenotype Ontology(PATO).

info Data file 
File name:
riken_piam_phenome.zip
File URL:
https://dbarchive.biosciencedbc.jp/data/arabid_pheno/LATEST/riken_piam_phenome.zip
File size:
2.3 KB
info Simple search URL 
info Data acquisition method 

Plant Ontology, Phenotype Ontology

info Data analysis method -
info Number of data entries 

114 entries

Data itemDescription
Entry URI Entry URI
Entry name Entry name
Entity in PO Entity (defined in PO)
Quality in PATO Quality (defined in PATO)
Num of observation data The number of entries where the phenotype is used in "Observation of Arabidopsis phenotype"