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List of Data Metadata
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Data name Database name DOI Description of data contents Data file Simple search URL Data acquisition method Data analysis method Number of data entries Data detail
Sample (S) Metabolonote 10.18908/lsdba.nbdc01324-002

Information about sample preparation methods.

metabolonote_sample.zip
(110 KB)
http://togodb.biosciencedbc.jp/togodb/view/metabolonote_sample#en

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185 entries
Data detail open_in_full
Sample Preparation (SS) Metabolonote 10.18908/lsdba.nbdc01324-008

Detailed information regarding sample preparations commonly applied to several samples, including information about growth conditions, drug treatments, etc.
Referred to by S (Sample information).

metabolonote_sample_preparation_details.zip
(13 KB)
http://togodb.biosciencedbc.jp/togodb/view/metabolonote_sample_preparation_details#en

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13 entries
Data detail open_in_full
Sample Set (SE) Metabolonote 10.18908/lsdba.nbdc01324-001

Information about a set of experimental data corresponding to the study purpose, including information regarding data interpretation and handling, such as which sample should be compared with which control, etc.

metabolonote_sample_set.zip
(41 KB)
http://togodb.biosciencedbc.jp/togodb/view/metabolonote_sample_set#en

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52 entries
Data detail open_in_full
BRC MicrobeDB.jp 10.18908/lsdba.nbdc01181-001.V002

Metadata of strains in NBRC and JCM with the annotation results of ontologies (i.e., MCCV and MEO).
Data file (compressed in tar.gzip) consists of 2 directories (see the following table).

brc.tar.gz
(6.7 MB)
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Metadata of strains were provided by NBRC and JCM in 2013 and 2016, respectively.

1,183,864 triples
Data detail open_in_full
Disease MicrobeDB.jp 10.18908/lsdba.nbdc01181-007.V002

The PDO annotation results of microbes including pathogenic disease name, symptom, causal genes, and related taxa.

disease.tar.gz
(1.2 MB)
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The information of pathogenic disease name, symptom, causal genes, and related taxa were obtained from literature.

253,056 triples
Data detail open_in_full
Data name Database name DOI Description of data contents Data file Simple search URL Data acquisition method Data analysis method Number of data entries Data detail