List of Data Metadata
| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data file ⇅ | Simple search URL ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Number of data entries ⇅ | Data detail |
|---|---|---|---|---|---|---|---|---|---|
| Variant | KEGG MEDICUS | 10.18908/lsdba.nbdc01185-007.V006 |
The KEGG VARIANT database is a collection of human gene variants that can be associated with human diseases and drugs. Each variant is identified by the human gene ID followed by "v" and a number. |
kegg_medicus_variant.csv.zip
(470 KB) |
http://togodb.biosciencedbc.jp/togodb/view/kegg_medicus_variant |
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1194 entries |
Data detail
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| All 3' EST | KOME | 10.18908/lsdba.nbdc00120-033 |
3' EST sequences |
CSV: kome_est_3end_all.zip
(70 MB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_est_3end_all#en | 536,885 entries |
Data detail
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| All 5' EST | KOME | 10.18908/lsdba.nbdc00120-034 |
5' EST sequences |
CSV: kome_est_5end_all.zip
(26 MB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_est_5end_all#en | 241,854 entries |
Data detail
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| Amino Acid Sequence | KOME | 10.18908/lsdba.nbdc00120-031 |
Amino acid sequences of the full-length cDNA clones deduced from the longest ORFs. |
CSV: kome_ine_full_sequence_amino_db.zip
(7.4 MB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_ine_full_sequence_amino_db#en | 37,073 entries |
Data detail
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| Arabidopsis CDS blastp result | KOME | 10.18908/lsdba.nbdc00120-017 |
Results of blastp searches against Arabidopsis thaliana CDSs |
kome_arabidopsis_cds_blastp_result.zip
(3.6 MB) |
http://togodb.biosciencedbc.jp/togodb/view/kome_arabidopsis_cds_blastp_result#en |
Predicted CDSs of Arabidopsis thaliana used for the searches were obtained from the TIGR Arabidopsis thaliana Database ver. 5. |
Performed blastp searches with the full-length cDNA sequences against predicted CDSs of Arabidopsis thaliana.
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137,642 entries |
Data detail
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| Data name | Database name | DOI | Description of data contents | Data file | Simple search URL | Data acquisition method | Data analysis method | Number of data entries | Data detail |