| Data name ⇅ | Database name ⇅ | DOI ⇅ | Description of data contents ⇅ | Data file ⇅ | Simple search URL ⇅ | Data acquisition method ⇅ | Data analysis method ⇅ | Number of data entries ⇅ | Data detail |
|---|---|---|---|---|---|---|---|---|---|
| (reprocessed) Enhancers | FANTOM5 | 10.18908/lsdba.nbdc01389-017.V003 |
Identified enhancers of human and mouse by RNA transcription mesurement with CAGE. They are reprocessed with new reference genome sequences (hg38/mm10). |
(reprocessed) enhancer (Homo sapiens)
(101MB) |
- |
CAGE |
Human: 5files / Mouse: 4files |
Data detail
open_in_full
|
|
| (reprocessed)CAGE peaks | FANTOM5 | 10.18908/lsdba.nbdc01389-009.V003 |
Data about CAGE peak regions and RNA transcriptional initiation activities measured by CAGE. Human and mouse reads are re-mapped to new reference genome sequences (hg38/mm10). |
(reprocessed)CAGE_peaks (Homo sapiens)
(11 MB) |
- |
CAGE
|
Human: 8 files / Mouse: 8 files |
Data detail
open_in_full
|
|
| (reprocessed)CAGE_peaks_annotation | FANTOM5 | 10.18908/lsdba.nbdc01389-011.V003 |
Annotation of human and mouse CAGE peaks and RNA transcriptional initiation activities by CAGE
|
(reprocessed)CAGE_peaks_annotation (Homo sapiens)
(19 MB) |
- |
CAGE |
Human: 4 files / Mouse: 4 files |
Data detail
open_in_full
|
|
| (reprocessed)CAGE_peaks_expression | FANTOM5 | 10.18908/lsdba.nbdc01389-011.V003 |
Annotation of human and mouse CAGE peaks and RNA transcriptional initiation activities by CAGE
|
(reprocessed)CAGE_peaks_annotation (Homo sapiens)
(16 MB) |
- |
CAGE |
Human: 7 files / Mouse: 7 files |
Data detail
open_in_full
|
|
| (reprocessed)DPI_clustering | FANTOM5 | 10.18908/lsdba.nbdc01389-018.V003 |
This is the peak identification of human and mouse reprocessed mapping data with DPI (Decomposition-based peak identification) method. (BED format)
|
(reprocessed)DPI_clustering (Homo sapiens)
(150MB) |
- | Human: 4 files / Mouse: 4 files |
Data detail
open_in_full
|
||
| Data name | Database name | DOI | Description of data contents | Data file | Simple search URL | Data acquisition method | Data analysis method | Number of data entries | Data detail |
List of Data Metadata