ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671903 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◣ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Tmx4
Cnih2
Orai3
Pin1
Tox2
Fam227b
Dtwd1
1700094D03Rik
Muc1
Gdf1
Cers1
Dad1
Abhd4
Sema4b
Eaf2
Dusp18
4921536K21Rik
Mapk8ip1
Ttll10
Tmc3
Ccdc30
Cfap298
Tppp3
Dnajc16
Casp9
Mapre3
Klhl18
Kif9
Xrcc1
Pinlyp
Tecpr2
Cinp
Tctn2
Ebna1bp2
Cfap57
Trim2
Lrrc56
Hras
Fam204a
Gstt2
Thnsl1
Enkur
Lins1
Kifbp
Mks1
Ccdc13
E4f1
Hydin
Wdr90
Cfl1
Mok
Zc3h3
Rlf
1110051M20Rik
Rsph1
Foxj1
Fam131a
1700030J22Rik
Ropn1l
Crocc
Micos10
Etfrf1
Casc1
Usp2
Zswim1
Mthfr
Clcn6
Tctex1d2
Syt5
Ppp2r1a
Pifo
Ubn2
Wdr66
Rfx1
Tmem9
Efcab1
Ak1
3110082I17Rik
Map9
Kdelr3
Cfap20
Cep112
Pitpnm1
Cdk2ap2
Tcea2
Sox18
Josd2
Aspdh
Fbxl16
Lrriq1
Mink1
Tmem138
Cyb561a3
Kcnn1
Cldn34d
Lsm10
Anks3
4930451G09Rik
Tmem209
Ssmem1
Cfap65
Cfap54
Rtca
Dbt
Gcc2
Itsn1
Cryzl1
Rusf1
Cabin1
2410004P03Rik
Usp30
Sde2
Iqca
Ubxn6
Hdgfl2
Kti12
Ssbp2
Etfbkmt
Ccdc39
Alkbh5
Ttll3
Maats1
Cox17
Stoml2
Ccdc57
Dnajc10
Cfap74
Klhdc9
Ccdc181
Chchd3
Mfsd4b4
B9d1
Rfx3
Dmwd
Prdm4
Srf
Mafa
Bbs5
Tekt4
Gar1
Dnaaf3
Mindy4
Lrrc23
Prkcsh
Ccdc151
Mib2
9530077C05Rik
Jam3
Traf3
Sipa1l1
Rundc1
Ptges3l
Smg7
Gm973
Fez1
Cenpf
Katnal2
Bbs1
Dync2h1
Dcun1d5
Spef2
B9d2
Morn3
Cyp46a1
Dyrk1a
Eif2b2
Rara
Crocc2
Nek2
Zdhhc1
Tmem167b
Lrrc6
Tada2b
Ccdc96
Arl6
Kif6
Efcab12
Caly
Pnma1
Mycbp
U2af2
Ccdc106
Cfap44
Pigx
Cep19
Slc6a19
Saxo2
Efl1
Ap1s1
Tsnaxip1
Ranbp10
Fam214a
Lrrc49
Iba57
Qtrt2
Ccdc191
Prepl
Camkmt
Plch1
Pold3
Oxnad1
Dph3
Rnf40
Ccdc189
Lfng
Eif2s1
Atp6v1d
Tubgcp3
Smpd2
Ppil6
Wdr27
1600012H06Rik
Zbtb46
Mfrp
C1qtnf5
Ufsp2
1700029J07Rik
Pofut2
Ccdc34
Dgkg
Otub1
Znhit1
Plod3
Prkar1b
Dnaaf5
Serf1
Bdp1
Dyrk1b
Tube1
Fam229b
Rpl30
Fbxw7
Jund
Iqcn
Ncoa5
Nme7
Blzf1
Gtf2f1
Psmc3ip
Prmt5
Nucb2
Psap
Cplane2
Pak1ip1
Rpl35a
Iqcg
Wdr7
Nsmce1
Map1a
Wdr78
Mier1
Tpm3
Mrpl10
Lrrc46
Fam98b
Pak4
Gpr19
Catip
Ttc41
Hsp90b1
Lrrfip1
Rer1
Morn1
Mocs3
Dpm1
Sf3a1
Ccdc157
Gtf3c1
D430042O09Rik
Ptges2
Rhpn1
Lrriq4
Lrrc34
Mbd4
Ift122
Trit1
Rpgrip1l
Fto
Mapre2
Nup50
Spout1
Zfp667
Sf3b5
Wdr31
Ptdss2
Wdr34
AI429214
Acot1
Tmem108
Morn2
Dhx57
Pik3r2
Ankrd13d
Fanci
Sun3
Gm11992
Mark3
Ccpg1os
Ccpg1
Fscn2
Timm10
Smtnl1
Stk32c
Lrrc27
Cep162
Churc1
Irak1bp1
Sertad3
Csnk1g2
Dync2li1
Ap3m2
Tmem219
Hmgcr
Ift22
Myo10
Oscp1
Sgta
Nkiras2
Dnajc7
Pold2
Cyth2
Mapk10
Dmkn
Akap11
Agbl3
Setd4
Cbr1
Ralgapa1
Cmtr2
Ccdc65
Ywhae
Hspbp1
Cfap161
E2f8
Gm12500
Ampd2
Rpf2
Lrrc73
Dlg4
Ift57
Dcp1b
Crnkl1
Cfap61
Lrguk
Fam151b
Sgsm1
Ehd1
Actr6
Gde1
Dusp6
Rrp12
Pheta2
Naga
Hsdl1
Dnaaf1
Copz1
Pcgf1
Dynlt1b
Parp4
Cenpj
Bbs9
Odf2
Ap3d1
Dym
Mast3
Tomm7
Slc25a46
Psma5
Ttll9
Cfap69
Ralgds
Tpgs1
Madcam1
Stk11ip
Mettl15
Kif18a
Sirt3
Psmd13
Armc9
Arrdc3
Cherp
Aqp4
Snrpd2
Qpctl
Spats1
4930505A04Rik
Klhdc10
Ccdc113
Cbx5
Acap2
Marchf9
Cdk4
Lman2l
Ovca2
Hic1
Dixdc1
1700010I14Rik
Lyrm4
Fars2
Trip4
Csnk1g1
Gmnc
Iqsec1
Fam183b
Plin5
Lrg1
Kmt5c
Rem2
Meig1
Dclre1c
Ubxn11
Ywhaq
Arf3
Dnajc1
Ddx24
Mrpl58
Tfip11
Eif4a3
Cetn4
Bbs12
Pomt2
Gstz1
Msi1
Agtrap
Arid4a
Slc39a13
Brms1
B4gat1
Slc9a8
Mns1
Efhc1
Adgb
Spef1l
Pick1
Ap2a1
Dnah9
Rnf141
Pcsk1n
Zbtb48
Ssc5d
Nat14
Leng8
Tdrp
Shq1
Kdm4a
Mxi1
Cfap36
Actc1
Rnf5
Agpat1
Tsga10
Zfp287
Rsph4a
Wfdc3
Dnttip1
Phc2
Rabl2
Ndufs5
Sdccag8
Cep170
Gpn3
Fam216a
Tspyl4
Mpc2
Dcaf6
Ptpn13
Taok2
Ddx41
Mlf1
Derl1
Ing1
Cars2
Mlec
Mtmr6
Myg1
Dnah2
Plekhb1
Rfc5
Spsb2
Pltp
Sertad1
Txndc17
4933427D14Rik
Dusp3
Cfap97d1
Rhobtb2
Map7
Synj2
Dynll1
Poll
Dpcd
Hdhd3
Ankrd54
Spag1
Zswim2
Drc1
Mapk15
Smc6
Gen1
Gsg1
Gtf2e2
Cfap221
Cdkl4
Tmem218
Nek11
Aste1
Per1
Zc2hc1c
Acyp1
Rps6kc1
Wdfy1
Dlec1
Dbn1
Pef1
Ttc27
Lmna
Fam227a
Cby1
Tasp1
Mov10l1
Mlc1
Rpn1
Spg21
Fzr1
Stxbp4
Cox11
Zfp24
Hsph1
Map6
Asb1
Rsph14
Rab36
Kcnip3
Tagln2
Ap1m1
Prr3
Gnl1
Galk2
Cops2
Cdkl1
Igsf9
P4ha1
Tex9
Nme5
Dnah7a
Spata7
Cfap97d2
Ttc30b
Fsip1
Fndc11
Glipr1l1
Ubxn10
Pla2g2c
Ccar2
Ccno
Ttc26
Tm4sf1
Rdh5
Bloc1s1
Ubxn2b
Slc27a1
Nxnl1
Saraf
Ndufa8
Morn5
Cenph
Spata17
Gpatch2
Adam22
Wdr54
1700003E16Rik
Tmem107
Sik3
Pafah1b2
Kpna1
Ankef1
Junb
Mrpl39
Tob1
Crip1
Tedc1
Trip12
Fbxo36
Zfp719
Nsdhl
Cetn2
Stx8
Cfap52
Tmem237
D230025D16Rik
Wdr17
Pspc1
Ube2o
Nudc
Spice1
Cog7
Rpp38
Acbd7
Ppp4r2
Prr7
Ccdc158
Ttll1
Nanos2
Mypop
Slc25a3
Mrpl22
Gemin5
Tmem89
Trub2
Abl1
Fam47e
Pi4k2a
Morn4
Pbx4
Peli1
Daam1
Gdf11
Qars
Nbr1
Brca1
Atf6
Hspa12a
Eno4
Ccdc126
Sfi1
Acox3
Spata24
Gpsm3
Samd4b
Gmfg
Capn10
Thbs3
Mtx1
A930007A09Rik
Stpg1
Nipal3
Itpkc
Coq8b
Fos
Chd4
Marchf10
Tbcel
Ctxn1
Ppm1e
Ccdc180
Map3k19
Eef1akmt2
Abraxas2
Pakap
Spata18
Sgcb
Abhd2
Fzd3
Fbxo16
Pcnx4
Tex45
Pex11g
Sik1
Kdm6b
Epb41l4a
Zfp688
Ift27
Sorbs2
Efcab2
Pisd
Tmem95
Kctd11
Ipo4
Cluap1
1700037C18Rik
Cipc
Cfap43
Glipr1l3
Caps2
Dnmt3a
Tbc1d32
Meak7
Yeats2
Slc25a14
Prkar1a
Gemin8
Ube2b
Cdkl3
Cfap46
Parp8
Ccdc170
Aopep
Dnah11
Ccnc
Mrps9
Tufm
Slc22a12
Sec61a2
Armc3
Sybu
Rab31
Tmem231
Dhx40
Iqce
Brat1
Neurl4
2810408A11Rik
D130043K22Rik
Klhdc8b
Ccdc71
Ccdc187
Mgat1
Arfip1
Zfp512
Spag6l
Spef1
Aatk
Otud5
Fam76a
Mief2
Flii
Dnajc27
Denn2b
Ppp2r3a
Foxo6
Chchd6
H1f10
Ift81
Pkp4
Ccdc148
Cep164
Knop1
Iqck
Ndufaf3
Dalrd3
Ttll13
Evi5l
Syna
Clip2
Fam185a
Ccdc146
Glis3
Ccdc184
Asb8
Ccdc107
Mul1
Med31
4930563E22Rik
Dnajc24
Xylb
Klf2
Syt10
Psmd8
Kntc1
Elmod1
Cfap20dc
Ankfy1
Ip6k2
Nsmf
Cd24a
Reep4
Katnal1
Rab28
Fbf1
Prkn
Pacrg
Rpl35
Arpc5l
Tuba1a
Dnajc15
Dynlt1f
Dynlt1c
Azin2
Mzf1
Wdr93
Pex11a
Notch1
Igsf11
Ppm1g
Adgra1
Copb2
Sufu
Actr1a
Jun
Shoc2
Bbip1
Esrra
Catsperz
Brd3os
Aspm
Casp6
Kif23
Hspa2
Mxd3
Ruvbl1
Galnt16
Map3k12
Faap24
Cfap73
Wwox
Zfp386
Zmynd10
Rassf1
Nprl2
Cyb561d2
Fscn1
Efcab6
1700001O22Rik
Hspa1l
Hspa1a
Dnaja1
Tmtc3
Cep290
Ulk4
Usf1
Nap1l1
Ccdc138
Sec16a
Dnajc25
Sec23b
Rbbp9
Cd82
Zbed5
Nmb
Calm2
Wdr35
Zbtb22
Tapbp
Marchf8
Wdr13
Myadm
Prkdc
Mcm4
Ankrd6
Fig4
Ak9
Glb1l2
Ift52
Sclt1
D3Ertd751e
Stk35
Nacad
Rap2a
Pibf1
Dis3
Pard6b
Nfkbil1
Ddx39b
Atp6v1g2
Togaram1
Klhl28
Gnb2
Slc25a18
Mtr
Vwa3b
Cars
Cpeb1
Coq3
Daw1
Cep128
Iqcc
Dcdc2b
Ccdc28b
Dnal4
Dnajb2
A630095N17Rik
Mtmr14
Nr1d1
Atp1a1
Wdr19
Klhl21
Sdcbp
Trp53rkb
Txn1
Ing2
Shank3
Lbhd2
Ccdc102a
Tmem17
Spns1
Pex12
Ap2b1
1700037H04Rik
Ssbp4
Sem1
Rhbdd2
Ppp1r32
Lrrc51
Prr18
Fank1
Dhx32
Ccdc162
Ift172
Fndc4
Fam161b
Coq6
Wdr60
Kif14
Nova2
1700028P14Rik
Med9
Btrc
Fkbpl
Atf6b
Dcaf12
Intu
Clec3b
Tekt1
Rtl5
Trp53bp1
Cdc14a
Timm21
Fbxo15
Afg1l
Tent5c
Get1
Dsel
Zfp407
Pacsin2
Mex3c
Zfp819
Elmod2
Wdtc1
Zfp523
Tom1l2
Drc3
Dnaaf2
Hipk1
Scd2
Uvrag
Rsph9
Ttc25
Dennd2a
Etv1
Atp2b2
Nqo1
Tmem39b
Slc25a33
Nemp1
Map3k14
Mas1
Smpd3
1700016K19Rik
Ndrg4
Bola1
Dpy19l2
Sfxn2
Arl3
Atp23
Cwf19l2
Lix1
Timm13
Ttf1
Cfap77
Edem3
5031439G07Rik
Cnpy3
Rps27rt
Rps27
Rab13
Casd1
Enkd1
4933405L10Rik
Ppil4
Tubb4b
Spop
Qtrt1
Rasl10a
Gas2l1
Lpin2
Dctn3
Sec22c
Tor3a
Wfdc1
Usp29
Peg3
Nudt2
Kif24
Tmem8b
Fam221b
Tmed10
Pgap3
Ttc21a
Gorasp1
AU041133
Hat1
Zmat2
Tmprss7
Zfp608
Gnl2
Slc4a8
Tnfaip1
Ift20
Ppp1r16a
Foxh1
Spata2
Rnf114
Eri3
Stx18
Lekr1
Bclaf1
Lca5
Fam161a
Pnp
Patl1