ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1161944 | MIN6B1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◢ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◣ SRX1161944: MIN6B1

◢ Rfx1: STRING

Gcc2
Mks1
Ccdc65
Poll
Dpcd
Ccdc39
Dync2li1
Ebna1bp2
Cfap57
Saxo2
Efl1
Tctex1d2
Lman2l
Wfdc3
Dnttip1
1110051M20Rik
Wdr66
Acox3
Acot1
Rrp12
Stxbp4
Cox11
Ttll10
Cenpf
Pin1
Dync2h1
Dcun1d5
Wdr34
Mapk10
Nsmce1
Ralgapa1
E4f1
Wdr27
1600012H06Rik
Tmem138
Cyb561a3
Ubn2
Usp30
Akap11
Pifo
Fsip1
Gar1
Ywhaq
Micos10
Ropn1l
Enkd1
4933405L10Rik
Trim2
Rhpn1
Wdr90
Pcgf5
Mib2
Bbs1
Rlf
Kifbp
Shq1
Tube1
Fam229b
1700010I14Rik
Cog7
Muc1
Sf3b5
Slc25a14
Prdm4
Etfbkmt
Stk32c
Lrrc27
Jam3
Acap2
Aopep
Tecpr2
Cinp
Sgta
Fndc11
Eaf2
Zdhhc1
Fanci
Tmx4
Meig1
Dclre1c
Fam131a
Hydin
Pold3
Spout1
Sik1
Dym
Dad1
Abhd4
Sik3
Pafah1b2
Nacad
B9d1
Tmem9
Ccdc34
Ccdc57
Syt5
Cfap44
Pnma1
Etfrf1
Casc1
Tasp1
Map7
Prkar1b
Dnaaf5
Alkbh5
Zbtb46
Asb1
Casp6
Nek11
Aste1
Eif2s1
Atp6v1d
Tmem209
Ssmem1
Ptdss2
Cyp46a1
Dcp1b
Cplane2
Lmna
Rnf141
Rtca
Dbt
Rpl35a
Iqcg
Cars
Ehd1
Wdr31
Oscp1
Myg1
9530077C05Rik
Ccdc181
Oxnad1
Dph3
Spef1
Rfx3
Irak1bp1
Lsm10
Ipo4
Ddx41
Fam227b
Dtwd1
Cetn4
Bbs12
Ift22
Wdr7
Cfap65
Mafa
Caly
Pik3r2
Hdac11
Foxj1
Ddx24
Actr6
Chchd6
Ttc30b
Ttll1
Bbs9
Tbcel
Rpf2
Zc2hc1c
Acyp1
4930505A04Rik
Tspyl4
3110082I17Rik
Rundc1
Ptges3l
Tbc1d19
Thnsl1
Enkur
Mfsd4b4
Zswim1
Marchf8
Spats1
Dyrk1b
Ufsp2
1700029J07Rik
Nme5
Arl6
Fam151b
Smg7
Nfasc
Zc3h3
Spag1
Ccno
Maats1
Pcsk1n
Cwf19l2
Cxxc1
Klhl18
Kif9
Mrpl10
Lrrc46
Zfp287
Lrguk
Tsnaxip1
Ranbp10
Dnajc25
Copz1
Mark3
Aldh3b1
Nek2
Prepl
Camkmt
Sipa1l1
Cdc37
Prkcsh
Ccdc151
Maco1
Ap1s1
Spef1l
Igsf11
Srf
Rnf32
Lrrc73
Dusp18
4921536K21Rik
Pcgf1
Cnih2
Smpd2
Ppil6
Iqsec1
Rtl5
Uvrag
Fbxw7
Dnajc10
Rpl30
Pds5b
Tctn2
H1f10
AI429214
Btrc
Traf3
Tekt4
Rer1
Morn1
Zfp719
Ubxn2b
Gtf2f1
Stx8
Cfap52
Ptges2
Lrif1
Rfc5
Agtrap
Trub2
Ctnna2
Tmem167b
Slf1
2210408I21Rik
Hnf4a
Sptbn4
Ndufs5
Dlec1
Mettl15
Kif18a
Galk2
Cops2
Ttll9
Cnot10
Fam183b
Klhdc10
Ncald
Hsdl1
Dnaaf1
D130043K22Rik
Tex9
Kif3b
Lrriq3
Fpgt
Arid4a
Dusp3
Cfap97d1
Ssbp2
Ift172
Fndc4
Tmed8
Samd15
Sde2
Chchd3
Psmc3ip
Orai3
Tob1
Wdtc1
Gstt2
Mrps9
Fbxw9
Sufu
Actr1a
Gas8
Dbndd1
Resp18
Ap3d1
Ppp2r1a
Inpp5f
Psmd8
Otub1
Naa20
Iqank1
Fam83h
Gtf3c1
D430042O09Rik
Tfip11
Siah1b
Wdfy1
Leng8
Timm10
Smtnl1
Ttc21a
Gorasp1
Ccdc126
Sema4b
Apbb1
Parp4
Cenpj
1700016K19Rik
Lmtk3
Dynll1
Lca5l
Ahi1
Wdr17
Sf3a1
Ccdc157
Capn10
Derl1
1700019D03Rik
Rfx1
Ass1
Pcp4
Celf3
Denn2b
Sirt3
Psmd13
A930007A09Rik
Arf3
Ubxn11
Map1a
Lrrc6
Fam204a
Samd4b
Gmfg
Pofut2
Kcnn1
Ppp1r7
Pask
Marchf9
Cdk4
Nr1d1
Pole3
4933430I17Rik
Alad
Wdr60
Cabin1
Nap1l1
Usp29
Peg3
Rsph4a
Jund
Iqcn
Armc9
Ube2o
Gemin8
Napg
Rpn1
Gtf2e2
Psma5
Cenph
Elmod2
Znhit1
Plod3
Itsn1
Cryzl1
Tsga10
Nphp1
Mtln
Churc1
Ovca2
Hic1
Ift57
Fbf1
Ankef1
D5Ertd579e
Rnf5
Agpat1
Tmem237
Ing2
Fam214a
2610028H24Rik
Trip4
Csnk1g1
Rfx5
Mycbp
Cfap73
Ak1
Rhbdd2
Cdc25b
Msmo1
Eif2b2
Dnah9
Ankrd42
Ncoa5
Bbs5
Pold2
Katnal2
Wdpcp
Mdh1
Cherp
Rtl6
Timm13
Bcar1
Plch1
Mtmr6
Lrrc49
Map9
Matk
Mast1
Fam234a
Ubxn6
Hdgfl2
Qtrt2
Ccdc191
Rpl24
Sec22c
Fkbpl
Atf6b
Plet1
Tgfb3
Ift43
Notch1
Nfam1
Faap24
Zfp174
Olfr15
Togaram1
Klhl28
E2f8
Pick1
Gck
Serf1
Bdp1
Cfap36
Copb2
Mrpl22
Gemin5
Mlf1
Nanos2
Mypop
Mocs3
Dpm1
Nqo1
Ift88
Glipr1l3
Caps2
Cfap126
Iqch
Aagab
Mapre3
Cep112
Crocc
Efcab1
Tmem231
Psap
Nucb2
Odc1
Fam187a
Eftud2
Ccdc103
Adgb
Hspa12a
Eno4
Qtrt1
Atf6
Mafg
Morn2
Dhx57
Stk16
Glb1l
Dagla
Cnpy3
Otud5
Mapk8ip1
Nme7
Blzf1
Polr2f
1700088E04Rik
Sorbs2
Spice1
Slc25a46
Rrp7a
Slc27a1
Nxnl1
Rsph9
Fam98b
Lrrc56
Hras
Trit1
Rpgrip1l
Fto
Ush1g
Otop2
Mapre2
Mink1
Xrcc1
Pinlyp
Srfbp1
Polr3h
Wdr78
Mier1
Alms1
Nubpl
Hmgcr
Atp23
Yeats2
Myt1
Map3k12
Crnkl1
Cfap61
Tdrp
Mok
Prkn
Pacrg
Cfap70
Ttc26
Wwox
Nbr1
Brca1
Dyrk1a
Dnajc1
Klhdc9
Brms1
B4gat1
Dnah11
Mxd3
Mpp2
Rgl1
Arpc5
Fzd3
Fbxo16
Mfsd4b1
Zfp667
Nudc
Spata2
Rnf114
Fos
Cfap69
Glipr1l1
Cfap20
Ralgds
B9d2
Srp72
Per1
Nudt2
Kif24
Snx15
Sac3d1
Ctxn1
Kdelr3
Cfl1
Tom1l2
Drc3
Rapgef4
Efhc1
Tada2b
Ccdc96
Mzf1
Upk2
Dusp6
Mcf2l
Lins1
Map3k14
Spata7
Hmgn2
Prr3
Gnl1
Sync
Nsdhl
Cetn2
Daam1
Rabl2
Tubgcp3
Jakmip2
Efcab12
Fhad1
Cldn9
Traf3ip1
U2af2
Ccdc106
Pnmal1
Ccpg1os
Ccpg1
Ssc5d
Nat14
Rara
Prr7
Zkscan7
Gm12258
Apba1
Taok2
Pomt2
Gstz1
Pitpnm1
Cdk2ap2
Spata24
Foxo6
Ccdc184
Asb8
Tmem218
Zeb1
Skiv2l
Nelfe
Pigx
Cep19
Slc25a3
Dyrk3
Prkar1a
Mindy4
Pak1ip1
Ttc25
Siva1
R3hdm2
Usp2
Cystm1
Ccdc30
Ankrd13d
Dctn1
Cops3
Ccdc107
Crb2
Dusp28
Ankmy1
Zfp688
Dmwd
Rfc1
Odf2
Csnk1g2
Wdr19
Clcn3
Nt5c2
Setd4
Cbr1
Rpp38
Acbd7
Gmppb
Amigo3
Klhdc8b
Ccdc71
Ccs
Ccdc87
Sdccag8
Cep170
Ttf1
Cfap77
Ptms
Cep162
Agbl3
Rsph1
Msantd4
Tcea2
Sox18
Tpgs1
Madcam1
Cmtr2
Spg21
Slc25a25
Azin2
Stk11ip
Dpy19l1
Kntc1
Pcf11
Mthfr
Clcn6
Rpl36
Micos13
Kif23
Cep295nl
Ccdc187
Rps3
Ppp1r16a
Foxh1
Zfp24
Btbd8
Glb1l2
Phactr1
Ywhaz
Cfap43
P4ha1
Pomc
Mlec
Rfx2
Lyrm4
Fars2
Anks3
4930451G09Rik
Erf
Tmem184c
Abi1
Ppm1e
Smpd3
Nup50
Mbd4
Ift122
Fam161a
Tmem216
Pef1
Slc17a7
Ift81
Naa40
Zbtb48
Rhobtb2
Zfp446
Spata6
Akr1e1
Usp35
Kctd21
Kcnip3
Pnp
Ndrg4
Rnf40
Ccdc189
Trp53bp1
Dnajc16
Casp9
Sclt1
D3Ertd751e
Pik3r4
Gm12500
Ampd2
Pspc1
Cacnb2
Brd3os
Ap1g2
Copg1
Clba1
Plac8
Pkp4
Ccdc148
Wdr93
Pex11a
Cfap54
Syna
Clip2
Cfap157
Sec61a2
Sec16a
Cpa4
Sdcbp
Rpl22l1
Vat1
Meak7
Prmt5
Cfap298
Tcp11
Pacrgl
Cibar2
Dnajc24
Ankrd37
Rap2a
Kiz
Ttc41
Hsp90b1
Rsph14
Rab36
Tmem107
Med9
Ogfod2
Arl6ip4
Gnb2
Snrpd2
Qpctl
Pi4k2a
Morn4
Zfyve28
Cfap99
Slc25a33
Nbeal2
Nmb
Saraf
Spsb2
Cyth2
Dnajb2
A630095N17Rik
Gtf3c4
Fzr1
Tex26
Arfgap2
Katnal1
Spata17
Gpatch2
Ndufa8
Morn5
Dnajc15
Arfip1
Sytl3
Cerkl
Tm9sf4
Armc4
Tbc1d32
Plp2
Cipc
Pcnx4
Igbp1
Ube2u
Knop1
Iqck
Tpm3
Gsg1
Gpsm1
Wdr35
Gng4
Tbc1d16
Ccdc40
1700030J22Rik
Fig4
Ak9
Zbtb40
Msh5
Clic1
Snrpf
Txndc17
4933427D14Rik
Kmt5c
Kti12
Ift74
Smim5
Kif14
Gde1
Igsf5
Mfn1
Cluap1
1700037C18Rik
Ing1
Cars2
Pih1d2
Nkapd1
Chd4
Hat1
Wdr13
Tmed10
Mgat1
Mapk15
Dlg4
Dbn1
Josd2
Aspdh
Zbed5
Xrra1
Spcs2
Zfp523
Fscn2
Prrc2b
Fbxo31
Eif4a3
Atp1a1
Tsen2
Zdhhc23
Ect2
Abcg2
Phc2
Cdkl2
Cobl
Smarcad1
Fam120b
Phf20
Arl13b
Surf4
Stkld1
Cfap410
Mul1
Tctn3
Entpd1
Tomm7
Crip1
Klhl7
Dnal4
Shoc2
Bbip1
Hsph1
Lekr1
Plin5
Lrg1
Apobec4
Mbnl2
Nfe2l1
Thop1
Gnl2
Dusp8
Arl2bp
Pkig
Srsf1
Map6
Gm35549
Arrdc3
Ap1m1
Ap2a1
Sp3
Qars
Grik5
Pak4
Zfp184
Cmip
Rab28
Aspm
Stoml2
Gpn3
Fam216a
Peli1
E2f5
Dbp
Chrm4
Gpr137
Bad
Rae1
Iqca
Dnal1
H13
Dnmt3a
Cdk5r2
Ankrd45
Strn4
Fkrp
Mbp
Ubl3
Tuba1a
Rfc2
Eef2kmt
Sun3
Gm11992
Ttc16
Ptrh1
Ap3m2
Chpf2
P2ry14
Skil
Bub1
Wars2
Ndufaf3
Dalrd3
Wiz
Prrt1
Ppt2
Snrnp35
Rilpl2
2900026A02Rik
Pex12
Ap2b1
Map4
Ift27
Rptor
Mthfd2
Plec
Kdm6b
Whrn
Kif27
Gnaz
Trim39
Iqce
Brat1
Cdk18
Junb
Thg1l
Nav2
Mcm7
Ap4m1
Pnmal2
Zbtb5
Cabcoco1
Intu
Camk2a
Dnaaf2
Eif4e3
Etv1
Sppl2b
Lsm7
Nol4
Baiap3
Cdkl1
Tedc1
Hspa4l
Olfr1344
Tufm
Mga
Smim22
Rogdi
Trim37
Nfkbil1
Ddx39b
Atp6v1g2
Cdc14a
Otud3
Tent5c
Ssx2ip
Spns1
Gpkow
Stard5
Dynlt1b
Znrf1
Fam227a
Cby1
Tex46
Trip12
Fbxo36