ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018670 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◢ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◣ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Olfr806
Wwox
Abhd6
Sbno2
Tent5c
Vmn2r102
Gcgr
Kpna1
Esr1
Scn8a
Csf2ra
Dchs2
Stap2
Mpnd
Lrch4
Fbxo24
Hrh2
Pik3c2g
Aven
Znhit1
Plod3
Grm7
Kbtbd3
Cyp2t4
Il31ra
Ct55
Gulp1
Olfr389
Ankar
Fah
Cldn34d
Zfp598
Edil3
Gtf2a2
Zfp1
Olfr117
Myocd
Sirpb1c
Tmem132d
Cbr3
Nudcd2
Hmmr
Pbk
Plekhg1
Tmem203
Ndor1
Tmem265
Ifna13
2610008E11Rik
1810037I17Rik
Rrad
Cdh16
Olfr1219
Olfr1158
Mup20
Scgb2b26
Acsl4
Mup9
Calr3
1700030K09Rik
Lgals7
Klrb1b
Thbs3
Mtx1
Ms4a1
Ctxn3
Dntt
Col17a1
Spdye4a
Etl4
Six6
Rasip1
Izumo1
Gm20594
Zdhhc17
Rps29
Eprs
Ccdc184
Asb8
Myoz3
Trim12a
Rmi2
Ezhip
Zfp810
Naa11
Pth
Olfr1008
Lrch1
Ifna5
Slc33a1
Dok6
Nemf
Car5a
BC034090
Rbp4
Zbtb12
Rin2
Oasl1
Ddx20
Shoc2
Bbip1
Prickle1
Pax2
Tgif1
Abl1
Tmem135
Katnbl1
Lurap1l
Gm4925
Arl1
Olfr1030
Vmn2r19
Olfr620
Olfr619
Arhgap18
Crhr2
Gdap1
Senp8
Myo9a
Lhx5
Dcaf10
Mmp25
Glis2
Saraf
Tpm1
Dcaf5
Tmbim6
Abr
Zfp263
Mroh7
Mettl4
Rnf220
Stx11
Commd1
Zrsr1
Hip1
Zfp936
Creb1
Anapc15
Awat2
Gabarapl1
Zscan4b
Obi1
Arl13a
Vmn1r13
Olfr850
Krtap3-2
A930009A15Rik
Rnf180
Hipk3
Tmigd1
Ccdc73
Zfp748
Frat1
G3bp2
Klhl29
Dgat1
Tyw1
Sbds
Bptf
Per2
Tmem125
Rps12
Pold4
Dmtn
Nbeal1
Macroh2a2
Fermt3
Fgf22
Fezf1
Fam227b
Dtwd1
Cyp26a1
Zfp143
Pnpla8
Ncor1
Trappc3l
Mlf2
Tmem249
Zfp994
Elavl2
Olfr805
Olfr594
Zcchc13
Zscan4f
Vmn2r12
Zfp820
Perm1
Olfr421-ps1
Gm4836
Gm14819
Gm14632
Gm10487
Gm10486
Gm10230
Gm10147
Gm10096
Gm10058
Eda2r
Cfi
Laptm4b
Gm11487
Med15
Nrg1
Tnfrsf9
Pml
Fis1
Pcbp1
Kcnt1
Zfp148
Nqo2
Wipi1
Nudt18
Ctf2
Mrap
2510009E07Rik
Kdm3b
Ergic1
Rtkn2
Satb2
Adipor2
Psma4
AY074887
Nfil3
Mapk13
Dpep2
Ctsz
Rpl35a
Iqcg
Trappc2l
Galns
Smim13
H2-Q4
Rbks
Babam2
Tmem43
Chchd4
Ipo11
Hmox2
Taar7a
Opa1
Tmem108
Hexim2
Gcdh
Nudt7
Gpr35
Susd1
Cenpi
Olfr99
Cyp2c67
Vmn2r42
Gm14595
Gm14590
Abcb1b
Olfr281
Lratd1
Olfr482
Vmn2r6
Vmn2r60
Usp17le
Trpa1
Timm8a2
Spata46
Sh3kbp1
Pnma3
Pla1a
Otud7a
Mybpc1
Mamld1
Luzp4
Klk5
Igf2
Hdgfl1
Glrb
2010106E10Rik
Sspn
Ambra1
Zfp607a
Cd1d1
Ppfibp2
Rad18
Rsl24d1
Zan
Mta3
AW549877
Stk32b
Slc5a3
Mrps6
Taco1
Cdc20b
Slc28a3
C2cd5
Acvr1b
Syt12
Slc35f3
Ubp1
Gm10639
Coa4
Mppe1
Espl1
Snapc1
Tacstd2
Rarb
Ndufaf4
Xrcc1
Pinlyp
Polrmt
Styxl1
Mdh2
Rnf125
Rxrb
Col11a2
Ky
Pidd1
Slc25a22
Denr
Nek2
Fyco1
Tmem267
Letmd1
Rbm39
Cdx1
H2ap
H2al3
Eef2
Dapk3
Rasl10b
Supt5
Zfp566
Zfp260
Cdk12
Guf1
Hpx
Slc15a1
H4c8
H2ac10
Eapp
Tex14
Fbxw7
Akirin2
Calr
Adgra2
H4c3
H1f6
Gabarapl2
Kcnk5
Efnb3
Tmem33
Plekhb1
H3c7
Hivep3
Oxnad1
Dph3
Aqp3
Ints3
H4c2
Tmem181a
Trim29
Socs3
Gpx4
Znfx1
Fubp3
Tomm5
H3c6
Mtf2
H4c4
H2bc6
Olfr180
H3c2
H3f3b
Rdm1
Prdx6
BC107364
Hoxb13
Slc35g3
Polr2a
Taf13
Ilf2
Bcl2a1a
Mkrn1
H2bc9
Bcl2a1b
H4c1
Mycn
Notch4
Cdk15
H3c3
H2bc3
Tmem191c
Tfrc
Ier5
H3c8
H3c11
H2bc22
H2ac22
H1f5
Pspn
Alkbh7
Adam5
P4ha3
Taf4
Bcl2a1d
H4c11
H3c15
H3c14
H2ac19
H2ac18
Klf2
H4bc24
H2bc23
H2ac24
H2ac23
Kat7
Cyth4
Ier2
Vgll2
Xylb
Sub1
Clcn4
H4c18
Capns1
Brwd1
Gnb5
Ing1
Ksr1
Jund
Iqcn
Rnf19b
Ect2
Trib3
H4f16
H2aj
Hspa5
Aadacl2fm1
Enpp4
Taf12
H2ac4
Poldip3
Mettl14
Malt1
Prkdc
Fam24b
Cidea
Rhobtb1
Nabp1
A930033H14Rik
Rnf13
H4c9
H2bc11
H2ac11
Tcp11
Cd44
Ap3s2
Mreg
Srsf3
H2bc21
H2ac21
H2ac20
H3c13
H2bc18
Baz1b
Mafa
H2bc4
H2ac6
H3c1
H1f1
Slc43a1
Dlg4
H2ax
Gja4
Cic
H4c17
Bmt2
Galnt2
H4c6
Gtpbp4
Ttpal
H2bc12
H2ac12
Evi5
H1f2
Adgre5
Foxo3
Sgf29
Itga5
Gtf2a1
Nudt4
Gstp2
Ccin
Nfyb
Arrdc2
Pmepa1
H1f4
Rgs18
Ncmap
Klf4
Hnrnpab
Fam53c
Plk3
Foxp1
Rsrp1
Phf5a
Aco2
H3c10
H2bc14
H2bc13
H2ac13
Dppa2
Nodal
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Tm7sf3
Asph
Hspa8
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Rrn3
Zbtb37
H4c12
H2bc15
H2ac15
Creb3l3
Tob1
Rusc1
Sfi1
Ifitm7
Bmerb1
Ints6
Gm3448
Gm3417
Arf4
Cited2
Hspb8
Icam1
Pitpnc1
Fbxo6
C1qbp
Dusp9
Ttk
Zfp827
Junb
Ranbp3l
Gm3435
Pcx
Ggact
Rarg
Porcn
Slc6a16
Cd37
Zdhhc18
Yars2
Kng2
Calm2
Hexim1
Jarid2
Rpl3
Stk3
Tpm2
Ttf1
Rab7
Ankrd39
Ppdpf
Atp2a2
Olfr646
Arl15
Gm867
Chchd10
Sde2
Nufip2
Mtg2
Rnd3
9030025P20Rik
Bcar1
Dcpp1
Hps5
Gtf2h1
Pnp
Mybpc3
Rai1
Utp14b
Acsl3
Hsp90aa1
Zswim8
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Stra8
Nudt1
Haus1
Atp5a1
Sdha
Ccdc127
Rnaset2a
Tsc22d1
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Slc9a1
Dnajb9
Uck1
Ccn4
Fut8
Sumf1
Atg14
Npbwr1
4921539E11Rik
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Hoxa1
Zfp36l1
Mok
Rnf169
Sbk2
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Ube2o
Acp6
Sgk1
Rnf103
Spata33
H4c14
Chmp1a
Gtf2a1l
Gtf2b
Ctsl
Sacm1l
Dcaf4
D230025D16Rik
Zfp532
Tro
Nop58
Hsp90ab1
Rfc5
H2-DMa
Brd2
Trim40
Fus
Raf1
Aplp2
Atp1a1
Gm648
Jpt1
Tbc1d10b
Mylpf
Fbxo31
Mpp7
Gadd45a
Hrob
Dpysl3
Rpgrip1
H1f3
Coro1b
Prdx1
Actb
Eif4g2
Gpcpd1
Sirt4
Dgat2
Trim41
Jam2
AU018091
Agrp
Clu
Mat2a
Tubb4b
S1pr2
Tcte3
Phc1
Fam32a
Ermard
BC005537
Id3
Cyfip2
Thrsp
Copz1
Arhgap19
Chd9
Trmt1
Nanog
Errfi1
Srsf2
Mfsd11
Men1
Cox17
Sf3b1
Eif4a1
Mknk2
Mib2
Mis18bp1
Smarca5
Pcna
Dusp1
Nphs1
Nme1
Arl4d
P4ha1
Gucy1a2
Mcl1
Hagh
Fahd1
Dhx9
Wsb1
Kank3
Cdh12
Tnfrsf19
Ehd4
Dag1
Proca1
Trpm1
Slc12a7
Dhx8
Tefm
Dedd
Slc29a1
Mymx
Gapdh
Amd2
Amd1
Actn4
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Ubxn2a
Arl6ip1
Mbd3
Faim
Vstm4
Selenbp1
Amacr
Psmb7
Ndufa6
Zfp119a
Mrpl37
Cyb5rl
Ago2
Clec11a
Trim7
Zfp980
Hbegf
Trp53inp1
Ftl1
Dpp4
Luzp1
Taar6
Agpat2
Tas2r134
Sema4f
Exosc5
Bckdha
Phf11d
Rab8a
H2bc1
H2ac1
Sertad1
Ankrd44
Slc38a2
Vegfa
Stpg4
Sephs2
Ifrd1
Nfe2
Resf1
Tmem116
Itpk1
Erp29
Tuba4a
A630095N17Rik
Pyroxd1
Slbp
Serpinf2
Spg11
Ppp2r5e
Gcm2
Ddx5
Cep95
Marchf3
Dmxl1
Mill1
Hjurp
A730008H23Rik
Lman1
Ifna6
Cela1
Dhx32
Chn2
Gtf3c6
Kcnn2
Atg4d
Omp
Nsrp1
Zfand5
Rita1
Ddx54
Slc38a5
Cog6
Sema4b
Nsd1
Fgl2
Fn1
Tmem107
Tnrc6c
Lgi4
Fxyd7
Fxyd1
Tob2
Plxdc1
Rps6
Rpl11
Prdm14
Btrc
Rhob
Pabpc1
Sqstm1
Fos
Rpl26
Ppp1r3c
Skp1
Zfp710
Acly
Txlng
Itpr1
Sod1
Atxn2
Zfp438
Klf7
Cnga1
Eif1
Tpst1
Cpt1a
Vcl
Peli1
Tlcd1
Gfod1
Gja1
Rcbtb1
Dennd6a
Vamp1
Slc25a3
Etv3l
Vars
Spred2
Gipc1
Gc
D17H6S56E-5
Agbl5
Pigt
Katna1
Cep43
Ankrd11
Tmem205
Ccdc159
Cat
Map4k4
BC031181
Slc25a39
Muc1
Lipe
Ep400
Ppp1r15b
Mnat1
Dhcr24
Trp53inp2
Tmem64
Msmo1
Dnaja1
Slfn4
Maats1
Zfp979
Wsb2
Dpysl2
Spata16
Eef1a1
Klk8
Pitrm1
Ubc
Hnrnph1
Inmt
Grap
Adamts19
Mad2l1bp
Extl1
Ccnyl1
Mafb
Ttc39c
Slc9a3r1
Maml1
Mfsd14a
Mllt6
Lgals9
Havcr2
Cfl2
Rpl36al
Mgat2
Ghdc
Epha2
P4hb
Eif4ebp2
Arhgap27
Sgpl1
Rps3
Ubr4
Tmem60
Phtf2
Ass1
Glul
Vgll4
Rps20
Ino80c
Jun
Sap18b
Sap18
Usp37
Plk2
Mterf1b
Cnot9
Ncl
H2-M5
Rpl23
Kazn
Clic4
Snrpe
Mbtps1
Traf7
Spc25
Ltn1
G6pc2
Herc2
Pdia3
Catsper2
Pdcl3
Ndufs7
Cebpa
Smndc1
Gm10710
Fam174c
Cirbp
Nfam1
Gfpt2
Tor1b
Ppp1r2
Ctnnb1
Sap30
Sirt3
Psmd13
Trim58
Slc22a23
Txn1
Mterf1a
Znrf1
Sirt1
Defb48
Rpl8
Commd5
Ttc41
Kmt5b
Hsp90b1
Vmn2r55
Ush1g
Otop2
Avpr1a
Nr6a1
Ubap1
Ptpmt1
Impdh2
Tra2b
Cdkn2aip
Idi1
Cdkn1a
Rab13
Sec22c
Ipmk
Cisd1
St3gal3
Sec22b
Phactr3
Nup50
Il12rb2
Pbx2