ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX018669 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX3301664: Embryonic limb

◢ SRX3301665: Embryonic limb

◣ SRX018669: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Wwox
Olfr806
Tent5c
Abhd6
Sbno2
Vmn2r102
Gcgr
Kpna1
Esr1
Csf2ra
Lrch4
Fbxo24
Stap2
Mpnd
Scn8a
Il31ra
Cbr3
Hrh2
Dchs2
Znhit1
Plod3
Rasip1
Izumo1
Pik3c2g
Edil3
Rps29
Fam227b
Dtwd1
Zscan4b
Ccdc184
Asb8
Fah
Gtf2a2
Zdhhc17
Ifna13
Klrb1b
Olfr1030
Pax2
Zfp143
Ldlr
Bbs2
Tyw1
Sbds
Lgals7
Sspn
Zfp598
2610008E11Rik
Trim12a
Awat2
Vmn2r19
Gulp1
Slc33a1
Commd1
Zrsr1
Malt1
Rbp4
Etl4
Prickle1
Rrad
Cdh16
Tgif1
Cldn34d
Pbk
Gabarapl1
Ccdc73
Olfr117
Myocd
Arl13a
Nqo2
Rmi2
Ipo11
Six6
Oasl1
Nemf
Lurap1l
Fgf22
Ct55
Col17a1
Grm7
Olfr389
Ezhip
Olfr620
Olfr619
Shoc2
Bbip1
Pnpla8
2510009E07Rik
Dhcr7
Klhl29
Tmigd1
Rin2
Plekhg1
Nfil3
Frat1
Tmem43
Chchd4
Cyp2t4
Zfp810
Tmem265
Acsl4
Taar7a
Tram1
Myoz3
Tmem108
Zbtb12
Sirpb1c
Olfr1219
Calr3
1700030K09Rik
Thbs3
Mtx1
Naa11
Hip1
Vmn1r13
Olfr99
Tacstd2
Gm4925
Arl1
Mroh7
Rps12
Ankar
Car5a
Rps6
Zfp1
Creb1
Eprs
Kbtbd3
Nudcd2
Hmmr
Lhx5
Dcaf5
BC034090
Zfp607a
Dgat1
Tmem249
Kdm3b
Mppe1
Fezf1
Taco1
Prkdc
Gm20594
Ddx20
Slx4ip
Anapc15
Pold4
Obi1
Olfr1158
Ms4a1
Ctxn3
Pth
Olfr850
Olfr805
Olfr594
Vmn2r42
Gm14595
Gm14590
Hoxd3
Wls
Trim34b
Timm8a1
St8sia4
Hoxd4
Gm7972
1810037I17Rik
Lsm14a
Uba3
Arl6ip5
Per2
Ovol2
Mup9
Aven
Wiz
Vps8
2700062C07Rik
Ergic1
Rab7
Susd1
Mup20
Naa50
Atp6v1a
Fis1
Nudt18
Arhgap18
Dpysl5
Rbks
Babam2
Pcdhga12
Tmem125
Itgb2
Tle4
Tmem267
Dgka
Akap13
Pja1
Zfp110
Selenoo
Nrg1
Tnfrsf9
1700125H20Rik
Olfr1008
Krtap3-2
A930009A15Rik
Zscan4f
Vmn2r12
Olfr281
Fyb2
Zscan4c
S100a3
Olfr729
Olfr728
Olfr46
Olfr1351
Tmbim6
Rad18
Rpl38
Mmp25
Plekhb1
Abl1
Saraf
Nbeal1
Senp8
Myo9a
Tmem132d
Egln3
Rnf220
Anpep
Cd1d1
Rps9
Abr
Opa1
Ubp1
Stx11
Snx10
Snurf
Snrpn
Coa4
Zfp748
Dtx3
Arhgef25
Slc38a10
Hunk
Gm10639
Proca1
Adcy9
Zfp148
Ptpn13
Hpx
Zfp263
C130073F10Rik
Cdrt4
Ambra1
Spdye4a
Olfr482
Psip1
Olfr1197
Cracdl
Hmox2
Bptf
Ttc26
Cdc25a
Npm2
Elf2
Ky
Clcn4
Ctf2
Trrap
Cdc20b
Pcbp1
Cdh12
Zfp866
Elavl2
Fyco1
Mtmr6
Adipor2
Letmd1
Psmb2
Knop1
Iqck
Spata33
Chmp1a
Dcaf10
Ncmap
Rusc1
Pidd1
Slc25a22
Baz1b
Foxp1
Rxrb
Col11a2
Denr
Slc15a1
H4c8
H2ac10
Eapp
Tex14
Fbxw7
Akirin2
Calr
Adgra2
H4c3
H1f6
Gabarapl2
Kcnk5
Efnb3
Tmem33
H3c7
Rarb
Hivep3
Oxnad1
Dph3
Aqp3
Ints3
H4c2
Tmem181a
Trim29
Socs3
Gpx4
Znfx1
Fubp3
Tomm5
H3c6
Mtf2
H4c4
H2bc6
Olfr180
H3c2
H3f3b
Cdx1
Rdm1
Prdx6
BC107364
Hoxb13
Slc35g3
Polr2a
Taf13
Ilf2
Bcl2a1a
Mkrn1
H2bc9
Bcl2a1b
H4c1
Mycn
Notch4
Cdk15
H3c3
H2bc3
Tmem191c
Tfrc
Ier5
H3c8
H3c11
H2bc22
H2ac22
H1f5
Pspn
Alkbh7
Adam5
Cyp26a1
P4ha3
Taf4
Bcl2a1d
H4c11
H3c15
H3c14
H2ac19
H2ac18
Klf2
H4bc24
H2bc23
H2ac24
H2ac23
Kat7
Cyth4
Ier2
Vgll2
Xylb
Sub1
H4c18
Capns1
Brwd1
Gnb5
Ing1
Ksr1
Jund
Iqcn
Rnf19b
Ect2
Trib3
H4f16
H2aj
Hspa5
Aadacl2fm1
Enpp4
Taf12
H2ac4
Poldip3
Mettl14
Fam24b
Cidea
Rhobtb1
Nabp1
A930033H14Rik
Rnf13
H4c9
H2bc11
H2ac11
Tcp11
Cd44
Ap3s2
Mreg
Nek2
Srsf3
H2bc21
H2ac21
H2ac20
H3c13
H2bc18
Mafa
H2bc4
H2ac6
H3c1
H1f1
Slc43a1
Dlg4
H2ax
Gja4
Cic
H4c17
Bmt2
Galnt2
H4c6
Gtpbp4
Ttpal
H2bc12
H2ac12
Evi5
H1f2
Adgre5
Foxo3
Sgf29
Itga5
Gtf2a1
Nudt4
Gstp2
Ccin
Nfyb
Arrdc2
Pmepa1
H1f4
Rgs18
Klf4
Hnrnpab
Fam53c
Plk3
Rsrp1
Phf5a
Aco2
H3c10
H2bc14
H2bc13
H2ac13
Dppa2
Nodal
Btg2
Smc3
Ubb
Sumo1
Mphosph9
2810006K23Rik
Tm7sf3
Asph
Hspa8
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Rrn3
Zbtb37
H4c12
H2bc15
H2ac15
Creb3l3
Tob1
Sfi1
Ifitm7
Bmerb1
Ints6
Gm3448
Gm3417
Arf4
Cited2
Hspb8
Icam1
Pitpnc1
Fbxo6
C1qbp
Dusp9
Ttk
Zfp827
Junb
Ranbp3l
Gm3435
Pcx
Ggact
Rarg
Porcn
Slc6a16
Cd37
Zdhhc18
Yars2
Kng2
Calm2
Hexim1
Jarid2
Rpl3
Stk3
Tpm2
Ttf1
Ankrd39
Ppdpf
Atp2a2
Olfr646
Arl15
Gm867
Chchd10
Sde2
Nufip2
Mtg2
Rnd3
9030025P20Rik
Bcar1
Dcpp1
Hps5
Gtf2h1
Pnp
Mybpc3
Rai1
Utp14b
Acsl3
Hsp90aa1
Zswim8
Spg20
Rnaset2b
Srsf5
Eif2s3y
Sntb2
Mbd6
Ddit3
Insig1
Stra8
Nudt1
Haus1
Atp5a1
Sdha
Ccdc127
Rnaset2a
Tsc22d1
Csrnp2
Cbx4
Ppp1r10
Mrps18b
Slc9a1
Tmem135
Dnajb9
Uck1
Ccn4
Fut8
Sumf1
Atg14
Npbwr1
4921539E11Rik
Capn3
Pbld2
Hnrnph3
Ddit4
Klf6
Hoxa1
Zfp36l1
Mok
Rnf169
Sbk2
Calm1
Rbm14
Gm21992
Msh6
Gpx1
Ube2o
Acp6
Sgk1
Rnf103
H4c14
Gtf2a1l
Gtf2b
Ctsl
Sacm1l
Dcaf4
D230025D16Rik
Zfp532
Tro
Nop58
Hsp90ab1
Rfc5
H2-DMa
Brd2
Trim40
Fus
Raf1
Aplp2
Atp1a1
Gm648
Jpt1
Tbc1d10b
Mylpf
Fbxo31
Mpp7
Gadd45a
Hrob
Dpysl3
Rpgrip1
H1f3
Coro1b
Prdx1
Actb
Eif4g2
Gpcpd1
Sirt4
Dgat2
Trim41
Jam2
AU018091
Agrp
Clu
Mat2a
Tubb4b
S1pr2
Tcte3
Phc1
Fam32a
Ermard
BC005537
Id3
Cyfip2
Thrsp
Copz1
Arhgap19
Chd9
Trmt1
Nanog
Errfi1
Srsf2
Mfsd11
Men1
Cox17
Sf3b1
Eif4a1
Mknk2
Mib2
Mis18bp1
Smarca5
Pcna
Dusp1
Nphs1
Nme1
Arl4d
P4ha1
Gucy1a2
Mcl1
Hagh
Guf1
Fahd1
Dhx9
Wsb1
Kank3
Tnfrsf19
Ehd4
Dag1
Trpm1
Slc12a7
Dhx8
Tefm
Dedd
Slc29a1
Mymx
Gapdh
Amd2
Amd1
Actn4
Btg1
Hnrnpa2b1
Cbx3
Snx6
Gtf2f1
Adck5
Ubxn2a
Arl6ip1
Mbd3
Faim
Vstm4
Selenbp1
Amacr
Psmb7
Ndufa6
Zfp119a
Mrpl37
Eef2
Cyb5rl
Ago2
Clec11a
Trim7
Zfp980
Hbegf
Trp53inp1
Ftl1
Dpp4
Luzp1
Taar6
Agpat2
Tas2r134
Sema4f
Exosc5
Bckdha
Phf11d
Rab8a
H2bc1
H2ac1
Sertad1
Ankrd44
Xrcc1
Slc38a2
Pinlyp
Vegfa
Stpg4
Sephs2
Ifrd1
Nfe2
Resf1
Tmem116
Itpk1
Erp29
Tuba4a
A630095N17Rik
Pyroxd1
Slbp
Serpinf2
Spg11
Ppp2r5e
Gcm2
Ddx5
Cep95
Marchf3
Dmxl1
Mill1
Hjurp
A730008H23Rik
Lman1
Ifna6
Cela1
Dhx32
Chn2
Gtf3c6
Kcnn2
Atg4d
Omp
Nsrp1
Zfand5
Rita1
Ddx54
Slc38a5
Cog6
Sema4b
Nsd1
Fgl2
Fn1
Tmem107
Tnrc6c
Lgi4
Fxyd7
Fxyd1
Tob2
Plxdc1
Rpl11
Prdm14
Btrc
Rhob
Pabpc1
Sqstm1
Fos
Rpl26
Ppp1r3c
Skp1
Zfp710
Acly
Txlng
Itpr1
Sod1
Atxn2
Zfp438
Klf7
Cnga1
Eif1
Tpst1
Cpt1a
Vcl
Peli1
Tlcd1
Gfod1
Gja1
Rcbtb1
Dennd6a
Vamp1
Slc25a3
Etv3l
Vars
Spred2
Gipc1
Gc
D17H6S56E-5
Agbl5
Pigt
Katna1
Cep43
Ankrd11
Tmem205
Ccdc159
Cat
Map4k4
BC031181
Slc25a39
Muc1
Lipe
Ep400
Ppp1r15b
Mnat1
Dhcr24
Trp53inp2
Tmem64
Msmo1
Dnaja1
Slfn4
Maats1
Zfp979
Wsb2
Dpysl2
Spata16
Eef1a1
Klk8
Pitrm1
Ubc
Hnrnph1
Inmt
Grap
Adamts19
Mad2l1bp
Extl1
Ccnyl1
Mafb
Ttc39c
Slc9a3r1
Maml1
Mfsd14a
Mllt6
Lgals9
Havcr2
Cfl2
Rpl36al
Mgat2
Ghdc
Epha2
P4hb
Eif4ebp2
Arhgap27
Sgpl1
Rps3
Ubr4
Tmem60
Phtf2
Ass1
Glul
Vgll4
Rps20
Ino80c
Jun
Sap18b
Sap18
Usp37
Plk2
Mterf1b
Cnot9
Ncl
H2-M5
Rpl23
Kazn
Clic4
Snrpe
Mbtps1
Traf7
Spc25
Ltn1
G6pc2
Herc2
Pdia3
Catsper2
Styxl1
Pdcl3
Mdh2
Ndufs7
Cebpa
Smndc1
Gm10710
Fam174c
Cirbp
Nfam1
Gfpt2
Tor1b
Ppp1r2
Ctnnb1
Sap30
Sirt3
Psmd13
Trim58
Slc22a23
Txn1
Mterf1a
Znrf1
Sirt1
Defb48
Rpl8
Commd5
Ttc41
Kmt5b
Hsp90b1
Vmn2r55
Ush1g
Otop2
Avpr1a
Nr6a1
Ubap1
Ptpmt1
Impdh2
Tra2b
Cdkn2aip
Idi1
Cdkn1a
Rab13
Sec22c
Ipmk
Cisd1
St3gal3
Sec22b
Phactr3
Nup50
Il12rb2
Pbx2
Gria3
Gpsm3
Baiap2
Trpm3
Ndufs8
Rnf125
Muc5ac
Kctd5
Frmd6
Ubr3
Ptpn6
Grcc10
Fasn
Dnajb6
Il1b
Uspl1
Tcta
Rhoa
Wdr77
Atp5pb
Mrpl44
Limch1
Ppp1r15a
Plekha4
Prr5
Prmt8
Ncor1
Foxp2
Ankrd28
Cxcl5
Spry2
Mertk
Tmem235
Susd6
Gnai3
Cpm
Hhex
Epb41
Arg1
Urgcp
Hs3st3b1
Cenpm
Pcmtd1
Lilr4b
Orai1
Gls