ChIP-Atlas: Target genes

Potential target genes for Rfx1

Query protein: Rfx1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7671903 | Embryonic brains
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rfx1's Target genes

◢ Rfx1: Average

◢ SRX7671902: Embryonic brains

◣ SRX7671903: Embryonic brains

◢ SRX027337: mESC derived neural cells

◢ SRX1161944: MIN6B1

◢ Rfx1: STRING

Tmx4
Cnih2
Orai3
Pin1
Tox2
Fam227b
Dtwd1
1700094D03Rik
Muc1
Gdf1
Cers1
Dad1
Abhd4
Dusp18
4921536K21Rik
Sema4b
Mapk8ip1
Eaf2
Ttll10
Ccdc30
Cfap298
Tmc3
Tppp3
Mapre3
Dnajc16
Casp9
Xrcc1
Pinlyp
Tecpr2
Cinp
Ebna1bp2
Cfap57
Klhl18
Kif9
Trim2
Tctn2
Tcstv3
Gstt2
Fam204a
Asb7
Lrrc56
Hras
Thnsl1
Enkur
Mks1
Kifbp
Ccdc13
E4f1
Hydin
Cfl1
Mok
Zc3h3
Wdr90
Rlf
Crocc
1700030J22Rik
Foxj1
Rsph1
Ropn1l
1110051M20Rik
Fam131a
Tctex1d2
Micos10
Zswim1
Syt5
Etfrf1
Casc1
Usp2
Ubn2
Wdr66
Rfx1
Ppp2r1a
Mthfr
Clcn6
Pifo
3110082I17Rik
Map9
Tmem9
Pitpnm1
Cdk2ap2
Cfap20
Brox
Aida
Cep112
Kdelr3
Efcab1
Ak1
Lrriq1
Mink1
Fbxl16
Cldn34d
Itsn1
Cryzl1
Tcea2
Sox18
Tmem138
Cyb561a3
Lsm10
Kcnn1
Josd2
Aspdh
Tmem209
Ssmem1
Cfap65
Tctn1
Rusf1
Anks3
4930451G09Rik
Gcc2
Usp30
Rtca
Dbt
Cfap54
Cabin1
Iqca
Sde2
Ubxn6
Hdgfl2
Etfbkmt
2410004P03Rik
Ccdc39
Ttll3
Kti12
Ssbp2
Cfap74
Alkbh5
Dnajc10
Stoml2
Maats1
Cox17
Ccdc181
Ppp4r3b
Mafa
Klhdc9
Ccdc57
Chchd3
Mfsd4b4
Rfx3
Srf
Prdm4
Gar1
Lrrc23
Dmwd
B9d1
Bbs5
Dnaaf3
Mindy4
Tekt4
Lztfl1
Katnal2
Prkcsh
Ccdc151
Jam3
Mib2
Smg7
9530077C05Rik
Sipa1l1
Fez1
Bbs1
Cenpf
Traf3
Dyrk1a
Rundc1
Ptges3l
Spef2
Cyp46a1
Gm973
Dync2h1
Dcun1d5
B9d2
Eif2b2
Morn3
Lrrc6
Tmem167b
Zdhhc1
Nek2
Crocc2
Rara
Mycbp
Tada2b
Ccdc96
Caly
Arl6
Slc6a19
Pnma1
Pigx
Cep19
Efcab12
Qtrt2
Ccdc191
Pold3
Cfap44
Kif6
Ap1s1
Plch1
Fam214a
Saxo2
Efl1
Tsnaxip1
Ranbp10
Iba57
Lrrc49
Prepl
Camkmt
U2af2
Ccdc106
Oxnad1
Dph3
Lfng
Pofut2
Rnf40
Ccdc189
Zbtb46
Mfrp
C1qtnf5
Eif2s1
Atp6v1d
Tubgcp3
Wdr27
1600012H06Rik
Nme7
Blzf1
Ufsp2
1700029J07Rik
Prkar1b
Dnaaf5
Dgkg
Tube1
Fam229b
Smpd2
Ppil6
Psmc3ip
Ccdc34
Cplane2
Rpl30
Jund
Iqcn
Znhit1
Plod3
Gtf2f1
Map1a
Otub1
Dyrk1b
Prmt5
Nucb2
Fbxw7
Ncoa5
Psap
Mrpl10
Lrrc46
Fam98b
Serf1
Bdp1
Wdr7
Nsmce1
Pak1ip1
Wdr78
Mier1
Mbd4
Ift122
Rpl35a
Iqcg
Lrriq4
Lrrc34
Lrrfip1
Sf3b5
Catip
Gtf3c1
D430042O09Rik
Sf3a1
Ccdc157
Trit1
Tpm3
Rhpn1
Gpr19
Nup50
Ttc41
Hsp90b1
Pak4
Rpgrip1l
Fto
Rer1
Morn1
Mocs3
Dpm1
Ptdss2
Mapre2
Ptges2
Spout1
Wdr31
AI429214
Wdr34
Zfp667
Fanci
Acot1
Pik3r2
Morn2
Dhx57
Ankrd13d
Mark3
Sertad3
Tmem108
Sun3
Gm11992
Ccpg1os
Ccpg1
Srsf7
Stk32c
Lrrc27
Fscn2
Irak1bp1
Cyth2
Ap3m2
Ift22
Tmem219
Timm10
Smtnl1
Cep162
Pold2
Csnk1g2
Hmgcr
Churc1
Mapk10
Myo10
Nkiras2
Dnajc7
Dync2li1
Oscp1
Cmtr2
Dmkn
Ccdc65
Dusp6
Akap11
Dlg4
Setd4
Cbr1
Lrrc73
Agbl3
E2f8
Crnkl1
Cfap61
Sgta
Hspbp1
Copz1
Ywhae
Fam151b
Rrp12
Ralgapa1
Cfap161
Sgsm1
Lrguk
Gm12500
Ampd2
Ehd1
Rpf2
Ift57
Pheta2
Naga
Dcp1b
Dynlt1b
Gde1
Actr6
Mast3
Parp4
Cenpj
Odf2
Dym
Hsdl1
Dnaaf1
Bbs9
Tomm7
Pcgf1
Stk11ip
Cfap69
Armc9
Ralgds
Aqp4
Arrdc3
Ttll9
Ap3d1
Snrpd2
Qpctl
Slc25a46
4930505A04Rik
Sirt3
Psmd13
Tpgs1
Madcam1
Psma5
Marchf9
Cdk4
Spats1
Ccdc113
Mettl15
Kif18a
Dixdc1
Cbx5
Cherp
Trip4
Csnk1g1
1700010I14Rik
Lman2l
Klhdc10
Ovca2
Hic1
Acap2
Lyrm4
Fars2
Fam183b
Ywhaq
Eif4a3
Iqsec1
Gmnc
Ubxn11
Cetn4
Bbs12
Kmt5c
Rem2
Tfip11
Plin5
Lrg1
Arf3
Ddx24
Meig1
Dclre1c
Brms1
B4gat1
Agtrap
Dnajc1
Arid4a
Ap2a1
Mns1
Mrpl58
Sytl3
Tdrp
Dynlt1f
Dynlt1c
Adgb
Msi1
Pick1
Pomt2
Gstz1
Efhc1
Rnf141
Actc1
Cfap36
Ssc5d
Nat14
Slc39a13
Shq1
Leng8
Kdm4a
Zfp287
Mxi1
Spef1l
Pcsk1n
Dnah9
Rsph4a
Rnf5
Agpat1
Tsga10
Taok2
Mlec
Gpn3
Fam216a
Sdccag8
Cep170
Mpc2
Dcaf6
Plekhb1
Ndufs5
Ptpn13
Wfdc3
Dnttip1
Phc2
Rabl2
Derl1
Ing1
Cars2
Mtmr6
Sertad1
Dnah2
Tspyl4
Rfc5
Spag1
Pltp
Spsb2
Tmem218
Ddx41
Mlf1
Myg1
Txndc17
4933427D14Rik
Dusp3
Cfap97d1
Map7
Dynll1
Zswim2
Poll
Dpcd
Smc6
Gen1
Hdhd3
Ankrd54
Mapk15
Rps6kc1
Gsg1
Rhobtb2
Synj2
Drc1
Dbn1
Nek11
Aste1
Bbs4
Wdfy1
Per1
Gtf2e2
Dlec1
Asb1
Zc2hc1c
Acyp1
Pef1
Fam227a
Cby1
Ttc27
Ap1m1
Cfap221
Cdkl4
Cep41
Hsph1
Spg21
Zfp24
Fzr1
Stxbp4
Cox11
Rsph14
Rab36
Lmna
Kcnip3
Tasp1
Tagln2
Mov10l1
Mlc1
Rpn1
Cdkl1
Map6
Nme5
Galk2
Cops2
Igsf9
Ubxn2b
P4ha1
Cfap97d2
Dnah7a
Tex9
Prr3
Gnl1
Fsip1
Slc27a1
Nxnl1
Ubxn10
Pla2g2c
Spata7
Ccar2
Tm4sf1
Ccno
Glipr1l1
Rdh5
Bloc1s1
Ttc30b
Fndc11
Spata17
Gpatch2
Ttc26
Cenph
Ankef1
Ndufa8
Morn5
Saraf
Nudc
Adam22
Tmem107
Crip1
Tedc1
Wdr54
1700003E16Rik
Nsdhl
Cetn2
Zfp719
Ccdc158
Sik3
Pafah1b2
Wdr17
Kpna1
Mrpl22
Gemin5
Mrpl39
Junb
Spice1
Trip12
Fbxo36
Ttll1
Prr7
Tob1
Pbx4
Stx8
Cfap52
D230025D16Rik
Rpp38
Acbd7
Pspc1
Nbr1
Brca1
Abl1
Ube2o
Tmem89
Tmem237
Cog7
Peli1
Ppp4r2
Gdf11
Slc25a3
Qars
Nanos2
Mypop
Pakap
Kdm6b
Capn10
Trub2
Itpkc
Coq8b
Ccdc180
Fam47e
Ccdc126
Atf6
Pi4k2a
Morn4
A930007A09Rik
Daam1
Gpsm3
Spata24
Sfi1
Fzd3
Fbxo16
Thbs3
Mtx1
Hspa12a
Eno4
Acox3
Chd4
Pisd
Tbcel
Samd4b
Gmfg
Cluap1
1700037C18Rik
Eef1akmt2
Abraxas2
Spata18
Sgcb
Abhd2
Tex45
Pex11g
Pcnx4
Stpg1
Nipal3
Epb41l4a
Ctxn1
Marchf10
Sorbs2
Fos
Zfp688
Glipr1l3
Caps2
Map3k19
Ppm1e
Cipc
Tmem95
Kctd11
Tbc1d32
Slc25a14
Cfap43
Sik1
Klhdc8b
Ccdc71
Yeats2
Meak7
Ift27
Ipo4
Ube2b
Cdkl3
Efcab2
Spef1
Mrps9
Dnmt3a
Prkar1a
Gemin8
Zfp512
Slc22a12
Ccdc170
Sybu
Sec61a2
Iqce
Brat1
Cfap46
Tufm
Ppp2r3a
Mief2
Flii
Parp8
Dhx40
Aopep
Ccdc187
Arfip1
Tmem231
Armc3
Spag6l
Foxo6
Rab31
Ccnc
Aatk
Neurl4
2810408A11Rik
Fam76a
Mgat1
Dnah11
Otud5
Ndufaf3
Dalrd3
Ccdc107
Med31
4930563E22Rik
Cep164
Knop1
Iqck
Dnajc27
Evi5l
H1f10
Chchd6
Syna
Clip2
Denn2b
Glis3
Ccdc184
Asb8
Xylb
Clip4
Pkp4
Ccdc148
Klf2
Syt10
Fbf1
Dnajc24
Cfap20dc
Ankfy1
Rab28
Prkn
Pacrg
Reep4
Katnal1
Mzf1
Fam185a
Ccdc146
Esrra
Catsperz
Ttll13
Mul1
Elmod1
Psmd8
Ip6k2
Rsrc2
Kntc1
Cd24a
Nsmf
Ppm1g
Notch1
Ift81
Tmtc3
Cep290
Wdr93
Pex11a
Rpl35
Arpc5l
Adgra1
Faap24
Sufu
Actr1a
Jun
Shoc2
Bbip1
Azin2
Dnajc15
Brd3os
Tuba1a
Efcab6
Igsf11
Copb2
Wwox
Hspa2
Casp6
Galnt16
Map3k12
Fscn1
Nap1l1
Dnaja1
Hspa1l
Hspa1a
Usf1
Ulk4
Wdr13
Kif23
Aspm
Ruvbl1
Cfap73
Mxd3
Sec16a
Cd82
Wdr73
Nmb
Ccdc138
Zmynd10
Rassf1
Nprl2
Cyb561d2
1700001O22Rik
Wdr35
Marchf8
Myadm
Zbtb22
Tapbp
Dnajc25
Sec23b
Rbbp9
Zbed5
D3Ertd751e
Calm2
Nacad
Pard6b
Gnb2
Ift52
Prkdc
Mcm4
Slc25a18
Ankrd6
Daw1
Zfp386
Cars
Klhl21
Glb1l2
Stk35
Nfkbil1
Ddx39b
Atp6v1g2
Pibf1
Dis3
Rap2a
Togaram1
Klhl28
Mtr
Fig4
Ak9
Nr1d1
Dnal4
Cpeb1
Coq3
Vwa3b
Txn1
Lbhd2
Cep128
Ccdc102a
Iqcc
Dcdc2b
Ccdc28b
Spns1
Dnajb2
A630095N17Rik
Mtmr14
Atp1a1
Med9
Sem1
1700037H04Rik
Wdr19
Trp53rkb
Sdcbp
Ing2
Lrrc51
Shank3
Ppp1r32
Fam161b
Coq6
Ccdc162
Ift172
Fndc4
Wdr60
Tmem17
Pex12
Ap2b1
Prr18
Ssbp4
Rhbdd2
Get1
Fkbpl
Atf6b
Dcaf12
Clec3b
Fank1
Dhx32
Btrc
Tekt1
Kif14
Cdc14a
Trp53bp1
Tent5c
0610010F05Rik
Hipk1
Nova2
Dsel
1700028P14Rik
Intu
Atp2b2
Rtl5
Nqo1
Timm21
Fbxo15
Wdtc1
Zfp819
Afg1l
Smpd3
Dnaaf2
Rps27rt
Rab13
Scd2
Ttc25
Uvrag
Enkd1
4933405L10Rik
Etv1
Bola1
Elmod2
Zfp407
Pacsin2
Tmem39b
Mas1
Mex3c
Nemp1
Map3k14
Dpy19l2
Tom1l2
Drc3
Tor3a
Atp23
Zfp523
Rsph9
Timm13
Slc25a33
Cnpy3
Dennd2a
Slc4a8
Sfxn2
Arl3
1700016K19Rik
Tubb4b
Spop
Gnl2
Ndrg4
Usp29
Peg3
Qtrt1
Ttf1
Cfap77
Tmed10
Lix1
Edem3
Cwf19l2
Ttc21a
Gorasp1
Casd1
5031439G07Rik
AU041133
Rasl10a
Gas2l1
Zfp608
Wfdc1
Pnp
Dctn3
Lpin2
Sec22c
Spata2
Rnf114
Pgap3
Nudt2
Kif24
Lekr1
Ppil4
Tmem8b
Fam221b
Ppp1r16a
Foxh1
Net1
Patl1