ChIP-Atlas: Target genes

Potential target genes for Trim28

Query protein: Trim28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3661345 | Neuro-2a
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Trim28's Target genes

◢ Trim28: Average

◢ ERX2617006: 3T3-L1

◢ SRX225200: Bone Marrow Cells

◢ SRX134774: B cells

◢ SRX134775: B cells

◢ ERX2714288: ES cells

◢ ERX2714290: ES cells

◢ ERX2714293: ES cells

◢ SRX088970: ES cells

◢ SRX1022090: ES cells

◢ SRX1022091: ES cells

◢ SRX1022092: ES cells

◢ SRX1022093: ES cells

◢ SRX1022094: ES cells

◢ SRX1022095: ES cells

◢ SRX1093872: ES cells

◢ SRX1421937: ES cells

◢ SRX1421940: ES cells

◢ SRX1556083: ES cells

◢ SRX1556087: ES cells

◢ SRX1556091: ES cells

◢ SRX202997: ES cells

◢ SRX202998: ES cells

◢ SRX2228735: ES cells

◢ SRX2228736: ES cells

◢ SRX2529733: ES cells

◢ SRX2529735: ES cells

◢ SRX4159247: ES cells

◢ SRX4159248: ES cells

◢ SRX4159249: ES cells

◢ SRX4159250: ES cells

◢ SRX4159251: ES cells

◢ SRX4159252: ES cells

◢ SRX5140871: ES cells

◢ SRX5140872: ES cells

◢ SRX5140873: ES cells

◢ SRX5140875: ES cells

◢ SRX5140876: ES cells

◢ SRX5388086: ES cells

◢ SRX5388092: ES cells

◢ SRX5388094: ES cells

◢ SRX581836: ES cells

◢ SRX2228737: Hepa 1-6

◢ SRX3398411: Hepa 1-6

◢ SRX2104771: MEF

◢ SRX3661344: Neuro-2a

◣ SRX3661345: Neuro-2a

◢ SRX2775263: Th17 Cells

◢ SRX151985: Thymocytes

◢ SRX151986: Thymocytes

◢ SRX3307682: Treg

◢ SRX3307684: Treg

◢ Trim28: STRING

Plagl1
Nnat
Inpp5f
Insm2
Nap1l5
Six1
Commd1
Zrsr1
Gata2
Tbl1xr1
Cdh11
Sulf2
Adamts9
Erdr1
Jmjd1c
Mest
Ampd3
Zfhx4
Tmed9
Zdbf2
C2cd4b
B3glct
Thbs4
Klf9
Cux2
Pnpla1
Dazl
Celf4
Gm51573
Foxd1
Jag1
Gpbp1
Adcy9
Gas1
Syt9
Rsrp1
Pou3f1
Sfi1
Bglap3
Tril
Tox2
Sim2
Ppia
Neurod1
4931408C20Rik
Lhx4
Kdm3a
Naf1
Sox30
Nefl
Bcor
Dux
Sgce
Peg10
Fbxo42
Arpc2
Rere
Runx1
Ascl1
Mcph1
Mdga1
Trim80
Ywhah
Sspn
Igfbp7
Slc18a3
Rap1b
Id4
Tmem131
Gramd2
Rab14
Sptan1
Edc3
Acsl1
Begain
Alkbh5
Rbmxl2
Npepl1
Zfp111
Runx3
Tnks2
Abhd17b
1110059E24Rik
Ptprg
Cbfb
Eprs
6820408C15Rik
Prl3c1
Hmgcr
Prkar1a
Fbxo27
Oplah
Syn2
Snrk
En2
Plxnd1
Irf2bp2
Gm21190
Zfand5
Npm1
Zbtb2
Sfpq
Hjurp
A730008H23Rik
Purb
Stk32c
Ythdf2
Arf6
Nkx2-4
Rock2
Tigd5
Eef1d
Nfat5
Srsf2
Mfsd11
Mapk8ip1
Zic2
Nsd3
2310033P09Rik
Klhl24
Srebf2
Ncoa3
Fau
Tab2
Hint1
Set
Actg1
Ptges3
Cdc42
Lonrf1
Nfatc3
Wwc2
Hspb1
Ankrd11
Ankrd33
Nfkbiz
Serbp1
Ret
Tnpo1
Twist1
Irf2
Kcnk12
Rab6a
Gna13
Insm1
Serinc2
Jsrp1
Sumo2
Utp14b
Acsl3
Map3k3
Rnf149
Crebrf
Stox2
Eif4g2
Slc25a33
Zfp326
Mcl1
Apbb2
Hnrnpd
Mbnl1
Hnrnpa0
Pcmt1
Lats1
Insyn2a
Ap1s2
Sp4
Wiz
Glce
Atp2b1
Foxc2
Zfp638
Map3k2
Parp8
Cep85l
Itsn1
Cryzl1
Slc39a10
Dcaf6
Mon2
Pcm1
Ing2
Atp1a1
Syncrip
Peg3
Pgp
Itgb1
Cpeb4
Slc3a2
Yy1
Gls
Pwwp2a
H2-K1
Ppp2ca
B230219D22Rik
Psmd7
Rnf187
Phf20l1
Zfp91
Lpxn
Etnk1
Gapvd1
Kpna4
Csnk1a1
Ryk
Ptk2
Trp53bp2
Amd2
Amd1
G3bp1
Vldlr
Alx3
Ssbp2
Hnrnpab
Abi2
Mab21l2
Pawr
Gm21119
Ccni
2010109A12Rik
Cacybp
Rgmb
Pcbp3
Ddit4
Ank1
Pds5b
Casz1
Vezf1
Eea1
Zcchc9
Enc1
Hmgb2
Slc26a4
Pcbp1
Hnrnpa2b1
Cbx3
Ier5
Acly
Galnt13
Hspa1l
Hspa1a
Asxl1
4931429L15Rik
G3bp2
Mfsd14a
Eif3a
Zc3h6
Ep300
Zc3h15
Tcp11l2
Asxl2
Smc4
Asf1a
Spred1
Kansl1
Slc44a1
Rtn4
Dnajb4
Fubp1
Homer1
Lrrc47
Stxbp5
Wrap53
Trp53
Aff4
Wdr43
Fcho2
Stmn1
Tra2a
Prrc2c
Gnb1
Pxdc1
Ppm1b
Coro1c
Dtd2
Zbtb38
Csnk1g3
Zbed4
Atp5g3
Acvr1b
Sdccag8
Cep170
Eif4g3
Large1
Ube2e3
Klf14
Skida1
Ahctf1
Ankrd52
Elavl1
Aldoa
Kif5c
Wnk1
Ube2h
Slc7a5
Hspa5
Tram1
Smarcd2
Pink1
Sub1
Brd4
Psma3
Naa50
Psme4
Atp6v1a
Tcf4
Uhrf2
Gm15501
Phf10
Clk4
BC049762
Peli1
Glcci1
Cops3
Hnrnpr
Tead1
Srsf10
Hif1a
Rhob
Rpl32l
Anp32e
Efr3a
Mfsd6
Ralgps2
Srsf9
Fmnl2
Zfr
Cdk17
Ubald2
Rbbp6
Cnot6
Dst
Kmt2e
Syf2
Arfgef1
Grb2
Rnf217
Nptx2
Pum2
Xpr1
Btg1
Gnas
Oxct1
Rasal2
Maz
Map10
Gnaq
Snurf
Snrpn
Rfx3
Sumo1
Rab10
Bzw1
Asic2
Shoc2
Bbip1
Exosc6
Sf3b1
Usp47
Ccnl1
Rps23
Fndc3a
Efnb2
Fam120c
Hspa4
Dhx9
Uchl1
Kif1b
Scaf4
Sp1
1810013L24Rik
Srgap1
Zfp740
Ppp1r15b
Spen
Tmem74
P4ha1
Smc3
Marchf11
Sec63
Mllt10
Ddx5
Cep95
Klf10
Tfdp1
Wasf1
Cdc40
Man2a1
Aplp2
Srsf1
Srrm1
Mob1b
Fgfr1
Sinhcaf
Arf3
Snx25
Camsap1
Lrp11
Hacd1
Camk2n1
Irx5
Kcnk9
Crebzf
Pgam1
Slc30a5
Map4k4
Cyth3
Caprin1
Sel1l3
Baz1b
Rab3ip
Celf1
Raly
Wac
Zbtb18
Zfp292
Ptpn4
Rtkn2
Pfn1
Ern1
Mark3
Myh9
Usp34
Mat2a
Pbld2
Hnrnph3
Smarca5
Kctd3
Frg1
Btbd7
Scaf11
Bag3
Ndrg4
Tmf1
Znrf1
Raf1
Ankrd34b
Fam171b
Rpl8
Zdhhc20
Ier2
Zbtb10
Rps19
H3f3b
Kmt2c
Ap2a2
Fbxo21
4931428F04Rik
Nfkbia
Parp12
Slc25a4
Sms
Gatad2a
Ube2n
Mapk14
Ptov1
Pbx3
Dpysl3
Nlrx1
Dlc1
H2ax
Arhgap21
Krcc1
Slc10a4
Micos10
Smg1
Rrp8
Ilk
Rbms1
Reps1
Btf3
Strn3
Ap4s1
Rdx
1700025G04Rik
Pkn2
Eps15
Insr
Tsc22d2
Atad2b
Rai1
Osbpl6
Eif4e
Klhl2
Rad23a
Pabpc1
Ran
Rpn1
Cpsf6
Top1
Mcmbp
Garem1
Pard3
Brd1
Map3k21
Atxn2
Rcc2
Clic4
Map6
Rhbdf1
Api5
Cdkn1b
Ptbp1
Ptma
Tcte2
Afdn
Hexim2
Osbpl8
Msl2
Calm1
E2f1
Mpp6
Brd3
Bmt2
Fus
Rnf19b
Kat2b
Lyst
Tarbp1
Klf5
Pja2
Tcerg1
Pan3
Zeb2
Pcdhac2
Ppp2r5a
Dkk1
Zfc3h1
Thap2
Hnrnpf
Aebp2
Ipo7
Prtg
Usp10
Ivns1abp
Rev1
Arf1
Epb41l2
Primpol
Casp3
Pcnx
Nap1l1
Lrp6
Ppp4r3a
Wdr26
Galnt7
Rsbn1
Arih2
Ints6
Tob1
Spire1
Rrbp1
Btaf1
Pspc1
Azin1
Frat1
Slc25a3
Cdk13
Gpr62
Sertad4
Larp4b
Elf2
Dip2c
Tuba1a
Birc6
Srpk2
Fbxo33
Furin
Dusp6
Rufy3
Vps54
Pdzd8
Celsr1
Cbx1
Rasa3
Kdm7a
Marchf6
Pkp4
Stk38l
Sobp
Ccdc148
Pten
Tcf12
Hnrnph1
Loxl1
Upf2
Map3k5
Larp1
Irf2bpl
Fxr1
Gm15319
Gatad2b
Oasl1
Asmt
Fkbp6
Fscn2
Wbp4
Elf1
Rps29
Usp29
Ccdc107
Proca1
Tcerg1l
Rubcn
Fyttd1
Fbxo31
Mcts2
Ctnna3
H2-T24
En1
Cldn34c1
Esp8
Knl1
Zranb1
Zfp738
Sacm1l
Ndufs7
Fmc1
Prmt5
Rab11a
Ilf2
Mettl26
Vmn2r4
Tia1
Plekhg2
Psmb3
Crot
Lta4h
Smarcc2
Psip1
Tmem267
Acp6
Med16
Plcg2
Ppp6r3
Parp2
Mynn
Polg
Zfp991
Trim41
2610301B20Rik
H2aj
Anapc7
Plekhm1
Nat8f2
Mien1
Hexb
B4gat1
Cltc
Slc4a2
Zfp790
Sgtb
Nln
Utp3
Agbl5
Polr3e
Tmem129
Tacc3
Mfsd4b4
Msc
Ska1
Tmem64
Snta1
H4c8
Cad
Ttc17
Rora
Exd1
Chp1
Cldn7
Tmem191c
Calr
Kcnk10
Lasp1
Rgs20
Clcn4
Rex1bd
Nfkb1
Eef2k
H2al1k
Them4
Setbp1
Mrpl30
Mitd1
Cdv3
Tbc1d8
Gm3448
Gm3417
Tcte3
Ccdc153
Adsl
Macc1
Dpysl2
Cdk5r1
Tamm41
Rpe
Rnase4
Ang
Mbnl2
Gp5
Ino80d
Rgcc
Dcaf10
Trpm3
Srd5a3
Efcab8
Plekhf1
Riok2
Hopx
Fam219b
Ntn1
Tmeff2
Cacna1a
Pfas
Gm3435
Wrnip1
Ddx20
Tubb3
Zfat
Gpatch3
Aldh3a2
Gpcpd1
Fam172a
Ndel1
Mtf2
Alpk1
Gtf3c6
Npr3
Nrg2
Tmem164
Poglut3
Exo1
Impact
Paqr8
Rhox4g
Irx1
Ints8
Zfp329
Pheta1
Atp9a
9030025P20Rik
Ppp2r2b
Oxsm
Mdk
Ap1g1
Nsfl1c
Herc2
Prdm9
Adipor2
Pde5a
Scarf2
Ap1ar
Nefh
Ap1b1
Ascl4
Aloxe3
Evc2
C1ql4
Rgs9
Ncoa4
Mrpl44
Llgl1
Tuba1c
Klrg2
Hoxb7
Ccdc125
Tiprl
Sgo2b
Tspan13
Galnt2
Prex2
Zfp36
Vamp4
Mospd3
Ropn1l
Agfg1
Ddhd1
Cox10
Lrrc10b
Ermard
Tasp1
Eif5a
Ube2j2
Tm2d2
Adam9
Rilp
Mafk
Pi4k2b
Prkab1
Uspl1
Syne1
Hsdl2
Scly
Gorasp2
Ybx3
Ism1
Il6st
Tmem242
Kcng1
Chgb
Ube2cbp
Atg16l2
Itm2b
Ccar1
Tsc22d4
Atf4
Gtf3c3
Ints10
Wdr47
Sde2
H2-Bl
Scn8a
Pnma2
Dyrk1b
Ksr2
Rusc1
Rusc2
Dpy19l4
Ykt6
Auh
Cnp
Prr12
Tmem106a
Abca3
Abca17
Obsl1
Inha
Tjp3
Trp53rka
Spata31d1a
Ndrg3
Ttk
Pip4k2a
Tfap4
Nrarp
Slc22a23
Pmaip1
Ikzf3
Mcf2l
Nek9
Ppp1r8
Gmcl1
Apobec3
Mast1
Sbsn
Wdpcp
Prc1
Mdh1
Stx16
2900026A02Rik
Serpine1
Vapa
Mthfsl
Il33
BC051142
Myadm
Nup107
Erbb4
U2af1
Catsperg1
Arl15
Atf2
Rab42
Smg7
Dut
Kcnk3
Lzts2
Fzd2
Smpd3
Sord
Cdkn2d
Poc1b
Fbxl13
Armc10
Aco1
Tnfsf10
Arhgdig
Hic1
Mtg1
Cadm1
A830018L16Rik
Tuba1b
Oaz3
Poldip3
Zfp383
Phip
Pex3
Adat2
4833439L19Rik
Nvl
D030056L22Rik
Nup205
Chrnb2
Necab1
Rab33b
Mtrf1l
Crocc
Ppil3
Nif3l1
Mideas
Crhr1
Tlk2
Adnp
Galnt10
Hivep2
Cep164
Eml2
Shld2
Glud1
Dstyk
Chrna5
Fam184a
Tor1aip2
Tor1aip1
Samd5
Zbtb37
Galnt4
Cables2
Rhot1
Acaa1b
Terb1
Mblac1
Usp13
H2-Q8
H2-Q6
Rfx1
Tssk6
Ndufa13
Ttc37
Arsk
Sp9
Taco1
Kansl1l
Ddx19a
Nkap
Dock8
Ccs
Ccdc87
Sema6d
Mrpl9
Bdnf
Map4
Bsn
Tank
Psmd3
Slc6a7
Ankrd40
Rrm2b
Fam222b
BC034090
Fam234a
Sys1
4921507P07Rik
Tmcc1
Plekhg5
Dap3
Polr3a
Schip1
Gm3667
Fat3
Rad54l2
Hspe1
Hspd1
Zfpm2
Atg16l1
5730455P16Rik
Cpsf1
Lhfp
Fam167a
Dusp8
Tomt
Nedd9
Orai1
Ap1m2
Tpk1
Erbin
Scrn2
U2surp
Cyp21a1
Arap1
Mis18bp1
Coasy
Banp
Txnl4b
Dhx38
Trim3
Mocs3
Dpm1
Matn3
Susd4
Sox11
Mrps33
Defb35
Spata31d1b
Cox6c
Loxl4
Cenpb
Prelid3b
Gramd1a
Btbd8