ChIP-Atlas: Target genes

Potential target genes for Trim28

Query protein: Trim28
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3661344 | Neuro-2a
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Trim28's Target genes

◢ Trim28: Average

◢ ERX2617006: 3T3-L1

◢ SRX225200: Bone Marrow Cells

◢ SRX134774: B cells

◢ SRX134775: B cells

◢ ERX2714288: ES cells

◢ ERX2714290: ES cells

◢ ERX2714293: ES cells

◢ SRX088970: ES cells

◢ SRX1022090: ES cells

◢ SRX1022091: ES cells

◢ SRX1022092: ES cells

◢ SRX1022093: ES cells

◢ SRX1022094: ES cells

◢ SRX1022095: ES cells

◢ SRX1093872: ES cells

◢ SRX1421937: ES cells

◢ SRX1421940: ES cells

◢ SRX1556083: ES cells

◢ SRX1556087: ES cells

◢ SRX1556091: ES cells

◢ SRX202997: ES cells

◢ SRX202998: ES cells

◢ SRX2228735: ES cells

◢ SRX2228736: ES cells

◢ SRX2529733: ES cells

◢ SRX2529735: ES cells

◢ SRX4159247: ES cells

◢ SRX4159248: ES cells

◢ SRX4159249: ES cells

◢ SRX4159250: ES cells

◢ SRX4159251: ES cells

◢ SRX4159252: ES cells

◢ SRX5140871: ES cells

◢ SRX5140872: ES cells

◢ SRX5140873: ES cells

◢ SRX5140875: ES cells

◢ SRX5140876: ES cells

◢ SRX5388086: ES cells

◢ SRX5388092: ES cells

◢ SRX5388094: ES cells

◢ SRX581836: ES cells

◢ SRX2228737: Hepa 1-6

◢ SRX3398411: Hepa 1-6

◢ SRX2104771: MEF

◣ SRX3661344: Neuro-2a

◢ SRX3661345: Neuro-2a

◢ SRX2775263: Th17 Cells

◢ SRX151985: Thymocytes

◢ SRX151986: Thymocytes

◢ SRX3307682: Treg

◢ SRX3307684: Treg

◢ Trim28: STRING

Plagl1
Nnat
Usp34
Tmem164
Gpbp1
Inpp5f
4931428F04Rik
Myadm
Atg16l2
Rrp8
Ilk
Ap1s2
Insm2
Kansl1l
Nap1l5
Tbl1xr1
H2-L
H2-D1
Tnip1
Ifngr2
Sp4
Sun2
Meig1
Wrap53
Trp53
Foxj2
Ttc32
Immp2l
Erdr1
Yy1
Scrn3
Cir1
Nfkb2
Ptpn2
Cdh11
Jmjd1c
Gata2
Rab10
Sirt2
Nfkbib
Mcph1
Six1
Pik3r1
Ccdc107
Gid4
Rel
Degs1
C2cd4b
Vezf1
Sec23b
Micu3
Abtb1
Pcnx
Pdzd2
Relb
Phf10
Adamts9
Pnpla3
Azin1
Mtmr14
Cks2
Vps37a
Cnot7
Rusc1
Ggnbp2
Sp1
Pink1
Nfkbia
Sumo1
Tpr
Odr4
Tmf1
Arhgef4
Gm3448
Gm3417
9030025P20Rik
Golm2
Bcl7c
Parp8
Trim67
Zfhx4
Zfp740
Csad
Ampd3
Copg2
Tcte3
Gm3435
Phlda1
Acsl1
Rfx1
Eri1
Celf4
Stmn1
Gtpbp6
Nr2c2
9130401M01Rik
Glcci1
Specc1l
Cd83
Prr12
6430571L13Rik
Kdm3a
Cbx1
Camk1d
Mat2a
Phlpp2
Pacc1
Ago1
Xndc1
Rnf121
Ssbp2
Kansl1
Pigv
Rab8a
Lrch3
Trp53i11
R3hdm2
Nrbp2
E2f1
2310033P09Rik
Thap1
Srsf4
H3f3a
Jag1
B2m
Fh1
Cdc42
Hjurp
A730008H23Rik
Tox2
Tet3
Eprs
Mrps36
Tmem267
Elp5
Ctdnep1
Usp42
Xpot
Arf3
Mios
Atf4
Phc1
Mcu
Rbm19
Kpnb1
Dazl
Ttc17
Mthfd2
Cep135
Ap2s1
Phip
Srsf5
Jdp2
Ap1g1
Lhx4
Pdik1l
Klf11
Zfp738
Slf2
Usf3
Ppp2ca
H3f3b
Mest
Cyth2
Smarcd2
Sfi1
Hp1bp3
Irf1
Pnpla8
Rev1
Cdc14a
Tmem65
Heca
Crebrf
Usp49
Slc26a6
Commd1
Zrsr1
Mettl9
Ppia
Ttc3
Pigp
Brsk1
Cyrib
Lamp1
Pcm1
H2-K1
Pcmt1
Lats1
Rfx2
Slc12a4
Nap1l1
Zfp316
Snx25
Sptan1
Katna1
Adcy9
Ankrd11
Fjx1
Cbln3
Slc39a10
Mcm9
Safb2
Safb
Zfp384
Ppp1r18
Zfp91
Lpxn
Fus
Gatad2a
Bri3
Braf
Phactr4
St3gal2
Ep300
Cops3
Pex7
Pmm1
Mdm2
Bclaf1
Tlr2
Tpgs1
Sulf2
Rev3l
Rps29
Il6st
Cdkn2aip
Rrp7a
Tmem266
Fnta
Hnrnpab
Zhx3
Srebf2
Zbed4
Banp
Trappc11
Rwdd4a
Xpr1
Tnks
Bcr
Srek1
Tusc3
Ccdc88a
Sub1
Errfi1
Amfr
Ahctf1
Chrac1
Zdhhc2
Wdr62
Psma4
AY074887
Immt
Tmem240
Sephs1
Phf20l1
Abcd3
Nckap5l
Zbtb2
Mettl1
Eef1akmt3
Tra2b
Usp12
Slbp
Klf9
Heatr3
Slc38a2
Eea1
Mafg
Emp3
Kat6a
Nipsnap2
Yeats2
Vps37c
Nrbp1
Slc25a15
Ppm1a
Slc30a5
Zfp868
9930021J03Rik
Zfp1
Tm9sf3
Serinc2
Pbx3
Vkorc1l1
Zfp869
Pprc1
Gsr
Ing5
Fam76a
Zc3h14
Eif1
Rcc2
Ing2
Gm527
Srd5a3
Insm1
Dscc1
Dcbld2
Brpf3
Trp53bp2
Tab2
Zzz3
Kctd2
Dazap2
Atp5h
Tmem192
Zbtb17
Traf3
Lrrn2
Letm2
Cep131
Pcid2
Cul4a
Tbk1
Rgs19
Crebzf
Taf5
Pdpk1
Gpat4
Ing1
Rasal2
Kdm1a
Tent2
Spg7
Dlg4
Map2k7
Csrnp2
Nt5c2
Ubl3
Champ1
Zfp592
Pycrl
Tnpo1
Oaz1
Leprotl1
Rasa2
Fbxo42
Spen
Eif5
Polk
Cert1
Smarcd1
Lbr
Wasf1
Cdc40
Lactb
Ube2j2
Hmgxb4
Synrg
Hnrnpr
Casc3
Mrpl23
Mylpf
Tbc1d10b
Insig1
Zfat
Atxn7l3
Kctd3
Pogk
Ebf4
Dusp3
Fcho2
Usp21
Kri1
Ccnl2
Rnf149
Pkmyt1
Chpt1
Rufy2
Tnrc6a
Neurod1
Naf1
Setd1a
Ssb
Kpna1
Klhl24
2510039O18Rik
Tank
Zkscan17
Hnrnpa3
Git2
Acvr1b
Mbtps1
Sft2d3
Cnot1
Dennd6b
Capza2
Prep
Zfp653
Txnrd3
Plcg1
Nr1h2
Ptov1
Tex30
Chuk
Gmeb2
Gm51573
Pan3
Evi5
Zfp821
Desi2
Tprkb
Nat8f1
Zranb2
Fam20b
Caprin1
Cep350
Atp2b1
Vps26a
Tcta
Rhoa
N4bp1
Agtpbp1
Birc5
Ubxn2a
Stx11
Grb2
Sec61a2
Sstr3
Sntb2
Hmgcr
Atr
1700065D16Rik
Snx18
Gclm
Cnnm4
Stag1
Vps29
Rad9b
Sptlc2
Rcc1l
Inpp4a
Utp4
Spice1
Derpc
Chtf8
Luc7l2
Rps19
Nfat5
Larp4
Ubr4
Patl1
Eloa
Dgcr2
Srsf7
Hsp90aa1
2410002F23Rik
Cmip
Rnf2
Spcs3
Sbf2
Rrad
Cpsf6
Evi5l
Ddi2
Bbs2
Tlk1
Nanos1
Hnrnph1
Wiz
Sdccag8
Cep170
Ankrd52
Carnmt1
B230219D22Rik
Erc1
Tcp11l2
Btf3
Hexb
Anks3
4930451G09Rik
Elavl1
Itgb1
Golga5
Zfp24
Ncoa7
Zfp341
Dnajc1
Npepl1
Pomt2
Gstz1
Ptpn11
Atg10
Primpol
Casp3
Zmym4
Prrc2a
Phldb1
Mxd1
Tbc1d15
Ltv1
Eif4g1
Tead1
Prkaa1
Ywhab
Nck2
Lsm12
Cux1
Ccnb1
Lonrf1
Setx
Fer
Rnf166
Ctu2
Nckap1
Atrnl1
Anapc5
Eif4g3
Stox2
Uxs1
Rpl13
Ralbp1
Mapk8ip1
Als2
Rmi1
Hnrnpk
Rabgap1
Cers5
Snx5
Mgme1
Cmtm4
Mon2
Odf2
Spata5l1
Nr4a2
Ninj1
Letmd1
Fbl
Shld2
Glud1
4931408C20Rik
Nr1d2
Npm1
Mettl23
Rasgrp2
Xkr6
Usp22
Cd164
Cdc42bpa
Twsg1
Terf2
Syde2
Ppp2r2d
Mecp2
Mapk1ip1
Fbrsl1
Sort1
Macrod2
Slc22a23
Rhno1
Foxm1
Sdhaf2
Mindy4
Echdc3
Cpsf7
Cbfb
Sumo2
Hbp1
Mtx3
Rcl1
Btbd8
Srsf2
Mfsd11
Mob3c
Chmp3
Stau1
Mfsd13b
Lrrc8d
Cdr2
Ccdc91
Tmem131
Mob1a
Pum2
Spast
Wtap
Gabpb1
Smurf1
Fam171a1
Rheb
Homer1
Stxbp5l
Rbm48
Pgm2l1
Pex1
C1galt1
Baz2b
Slc9a1
Atp5g3
E2f8
Galc
Pyurf
Rnf216
Lrrc8a
Prdm4
Micu2
Cebpg
Btbd1
Arglu1
Bard1
Ndufab1
Srrm2
Angel2
Pcgf5
Lpcat4
Sap130
Lmbr1l
Bbc3
Hacd2
B3glct
Marchf8
Rhbdf1
Hdgfl3
Ppp2r5a
Adarb1
Vash2
Rnf139
Fam98c
Dcaf1
Elf2
Prag1
Ginm1
Raly
Pip4k2c
H3c15
H3c14
H2ac19
H2ac18
Tab1
Serf2
Zbtb11
Srsf6
Cyld
Brd4
Ppa2
Tacc1
Hint3
Scrib
Sart1
Slc25a33
Pfn1
Serpinb6a
Ripk1
Map1lc3a
Fbxo4
Dennd4a
Fmc1
Nup205
Tomm20
Ddhd2
Eaf2
Tmem263
Taf9
Rad17
Fhl4
Ak6
Erbin
Ctcf
Skil
Nol4l
Hsp90ab1
Capzb
Lrp6
Trank1
Sh3tc2
Saraf
Rasa1
Mxd4
Ccm2
Arid5a
Trim28
Wdr43
Naa25
Syf2
Slc25a4
Xrn2
Tmem165
Tada1
Eif3j2
Eif3j1
Btbd9
Klhl2
Smurf2
Klhl5
P4ha1
Naa50
Dip2b
Nfatc3
Atp6v1a
Ifrd1
Sec63
Zfand5
Ptges3
Nfyc
Dip2a
Ppp1r9a
Keap1
Fam78b
Abhd17b
1110059E24Rik
Asxl1
Rxylt1
Pdcd4
Smpd3
Kdelr2
Krcc1
Cmas
Eps15
Smarcc1
Gadd45a
Rnf146
Wee1
Tbca
Rasd1
H4f16
Pknox1
Peli1
Trrap
Gabarapl2
Wdr41
Ube2e3
Npcd
Cnot2
Cbx6
Ino80d
Polr3g
Mblac2
Eif4b
Dennd4b
Ccny
Syt14
Ube2n
Vps13b
Map3k3
Ypel5
Susd6
Sipa1l1
Nacc1
Maco1
Gemin5
Cnn3
Fbxo31
Nup35
Ankrd10
Tfdp1
Enah
Slc16a1
Itgb1bp1
Cpsf3
Ubxn7
Enpp1
Ubfd1
Srp72
Rpl17
Piezo1
Ears2
Tm2d2
Adam9
Smg7
Bcl7b
Kmt2c
Agpat5
Wdpcp
Mdh1
Tet2
0610030E20Rik
Klhl21
Tanc2
Pptc7
Mfn2
Gopc
Far1
Cox20
Wdr45b
Rpia
Eif4ebp2
Sod1
Camsap2
Ttc13
Slc30a9
Slc27a4
Nrtn
Arv1
Fam214a
Ing3
Tmx4
Strn3
Ap4s1
Rnf111
Raph1
Pcif1
Nrbf2
Ebag9
Dnajc10
Akap13
Agpat2
Tmem129
Tacc3
Poldip3
Kansl3
Ube2d3
Rae1
Arhgap17
Tango6
Upf2
Stam
Ptdss1
Mterf3
Tti1
Rprd1b
Pfn2
Rnf31
Psme2
Dchs1
Acbd3
Thbs4
Gigyf2
Tcf25
Atp13a1
Tdrd7
Cbfa2t2
Mllt10
Arsb
Man2c1
Wrn
Ube3c
Purg
Lpgat1
Jade1
Hsdl1
Hic2
Dnaaf1
Acin1
1700123O20Rik
Insr
Nbeal1
Nsd3
Sil1
Syncrip
Bcdin3d
Tsen15
Hlcs
Dnaja1
Dctd
Cnih4
Cbfa2t3
Arfgef2
Mcm7
Ap4m1
Rsrp1
Etnk1
Mthfd1l
Rdx
E2f7
Dstn
Clock
Rnf187
Eif3c
Timeless
Zfp318
Znhit1
Plod3
Fchsd2
Npepps
Urb2
Taf5l
Srp9
Ipo7
Sharpin
Peak1
Myl4
Maf1
Hmg20a
Cdc27
Vps4a
Pkd1
Zfp433
Gm32687
Carm1
Mettl25
Ccdc59
Ywhaz
Lmtk2
Itsn2
Fnbp1
Zcwpw1
Mepce
Gan
Pwwp2a
Sap30
Rbpms
Paip1
Bves
Rnf19b
Sesn1
Cep57l1
Sp3
Pyroxd1
Cmc2
Cenpn
Syt9
Uri1
Larp4b
Unk
Naxd
Dipk1a
Washc4
Lpin2
Grk5
Dnaja2
Rrnad1
Isg20l2
Zfp442
Pdha1
Map4k2
Jak2
Asns
Ncoa3
Zfp12
Sltm
Morf4l2
Prmt3
Hmgn2
Pou3f1
Bzw1
Aff4
Zfp428
Odc1
Mtus1
Fbxl5
Bcl2l1
Zmynd11
Serinc3
Nrf1
Rbbp7
Zc3h15
Sms
Usp25
Stat5b
Rab11fip2
Prkab2
Ddx39a
Eif4e
C2cd5
Sumo3
Stk38l
Cdc16
Notch2
Get4
Mcl1
Psme4
Cd47
Fbxo7
Patz1
Gtdc1
Ralgps2
Dvl3
Mageb3
Ctdspl2
Ubr5
Stard7
Srcap
Ptpn13
Nek7
Kif2a
Ep400
Csk
Pdlim5
Dip2c
Ubqln1
Tdp1
Kcmf1
Efcab11
Fbxl13
Armc10
Ncoa5
Agpat4
Zdhhc3
Ubac1
Exosc7
Ctnnbip1
Csnk1d
Actr2
Rab5a
Exosc6
Phb2
Emg1
Psmd7
Ahi1
E2f2
Vps54
Naa60
Fadd
Cfap74
Pnpla1
Pfkm
Spred1
Tmem170b
Senp1
Ccdc6