ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: HDAC4 | STRING
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◣ HDAC4: STRING

CLDN2
MTRNR2L2
MSH3
DHFR
KIF5C
MTRNR2L1
MTRNR2L8
DUX4
SPATC1L
HDAC9
RGPD2
RGPD1
FRG2C
MAMDC2
TXNDC5
FRMPD4
ADAMTSL1
TIPARP
SP2
CABCOCO1
ARID5B
FRG2
ARHGEF9
COL23A1
MTRNR2L9
KATNB1
TNFRSF19
H4C15
H4C14
H3C15
H3C14
ZBTB38
EVI5L
FAP
UTP3
CCDC90B
POLR3F
DZANK1
SSBP1
H4C3
H1-6
ANKRD28
PTPN6
PCM1
H2AC19
H2AC18
H4C12
H4C11
SF3A3
EMILIN2
MTRNR2L10
SLC25A20
NAV3
DNM2
RBBP5
PPP5D1
CALM3
FNDC3A
CIC
EMCN
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
LY6L
TEPSIN
NDUFAF8
KHSRP
C5orf38
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
DDX23
GBA
EAPP
SP1
DPH6
PROSER3
LIN37
HSPB6
RFX1
YJU2
CLPB
TOP2A
PLA2G4A
MRPL24
HDGF
PAFAH2
RPAIN
NUP88
ZAR1
BOD1
SLC8A1
TMEM242
VPS50
HEPACAM2
IARS2
BPNT1
ATP6V1G1
H3C4
EPS15
PSPN
ALKBH7
UNK
H3-3B
H2BC14
H2AC14
UBE2T
PPP1R12B
UBE2J1
TACO1
INO80C
HEATR5B
GPATCH11
TMEM115
NUDT13
NPRL2
CYB561D2
SRCIN1
H2BC15
H2AC15
CALCOCO1
SLC25A25
NAIF1
INTS1
SYT7
PRR14
FBRS
TAF12
DDX49
COPE
GLIPR1L1
CAPS2
PTEN
KLLN
CCL3
UVRAG
CHMP4B
CCDC200
PLA2G15
INTS10
HNRNPUL1
ARHGAP17
TCEA2
MYOM2
FEM1A
AURKAIP1
GTF2I
FCRL5
NAA80
IFRD2
HYAL3
PHRF1
CSDE1
TBL1X
RWDD1
PARP16
ANGPTL2
USP22
TP53I3
SF3B6
FAM228B
EHF
PHF19
PHF12
H2BC4
H2AC6
TOMM40L
ASAH2
APOA2
GSPT1
ARHGEF2
MATR3
FBXL19
BRWD1
TSN
LOC102724770
DGCR6
ARHGAP35
AP2S1
TRAPPC9
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
TMEM107
KLHL29
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
IRF2BP2
MAPKAPK5
LSG1
DENND1B
COMMD1
CD79A
CCT4
ARHGEF1
NDUFS3
KBTBD4
FAM180B
RHOT2
RHBDL1
OR4M1
B4GALT3
SMARCD2
SELENOH
RAD52
NLK
LARS1
OSBP
MTOR
GALM
PHB
NUF2
STAT1
PPP1R2
IL32
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
FAM168A
ZNF687
TSSC4
TJP3
BANP
SIX1
PEX14
DFFA
SIRT4
TRIP10
TBC1D17
PNKP
GPR108
ATF4
AKT1S1
ZC3H10
RPL41
RMDN2
PRCC
CCDC138
TESK2
MMACHC
CCL3L3
CCL3L1
CCDC163
RPS20
AK2
MDM2
FBH1
ENPP4
CLIC5
PRRG2
NOSIP
PPRC1
ARID2
ACTL6A
KLF2
PDE4DIP
ID3
GCLC
CCDC110
SSR3
S1PR4
NUDCD1
NCLN
FAM177B
CALR3
C19orf44
BAHCC1
SUCLG1
LNPEP
ATP2C1
NEBL
KLF6
TXNDC11
TMEM256
PLSCR3
NLGN2
DHX8
ST3GAL2
HIKESHI
PWWP2A
ZFYVE1
SSBP2
HEXIM2
ART1
TOM1L2
FUT10
DRC3
CYTH3
SCT
PAK1IP1
DRD4
CDHR5
C6orf52
NLRP3
TSC2
RAP2B
PRDM15
NTHL1
CCL5
ADAMTS9
ANKHD1-EIF4EBP3
ANKHD1
TRIP4
PCLAF
ORMDL3
GTPBP6
GSDMB
USHBP1
BABAM1
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MRPS18C
HELQ
HCAR3
TMEM208
SMAD3
RAB11B
LTN1
LRRC29
GUCY2D
DPP9
CCDC39
SHC1
RAB5B
PMEL
PANK4
OR4Q3
HES5
FLAD1
DAGLB
CKS1B
CDK2
BMF
SPSB3
MRPS34
LRCH4
FBXO24
EME2
CBWD2
INVS
ERP44
TOM1
NPIPA1
ZNF17
SMPD3
MDM4
IL17A
COX16
CCDC146
UCKL1
RAG2
PRR5L
NPR1
ILF2
IFTAP
GLDN
COMMD9
CCM2
XAB2
UBE2H
STXBP2
RPL27
RASAL2
PCP2
IFI35
VIPAS39
NCOA7
KANSL3
FER1L5
BDH1
AHSA1
TJP1
RUFY3
NDC80
METTL4
HNRNPC
CRYBB1
ZNF417
SNX16
RPS3
ZNF48
TBC1D10B
MYLPF
C1orf198
PEMT
IFNGR2
H4C4
H2BC6
PIGL
NCOR1
ZPBP2
USP3
SPAAR
RGS8
IKZF3
HRCT1
PES1
ID1
SP5
SKA2
PRR11
ING4
DRAP1
C11orf68
CSNK1G3
WHAMM
UNKL
FSD2
CHST12
C16orf91
BBX
KMT2C
HOOK1
PNKD
MED23
GPBAR1
ENPP3
COMMD2
CCAR2
C8orf58
AAMP
STIP1
SLC35B1
NGB
NAT16
FETUB
NUP107
BUB1B
SLC33A1
PIN4
GATB
OST4
KHK
EMILIN1
CMSS1
BIN2
NDUFS7
KRR1
GPR137
EML2
ZNF268
MRPS23
LRRC14B
NOP16
HIGD2A
FMO4
AQR
ZNF608
PAX5
MNT
FGG
BMP5
WT1
USP30
POLG
STX16
C2orf42
SRSF11
RXFP4
LRRC40
KHDC4
HSD11B1
CNIH4
ZNF639
ZNF513
SNX17
SLC2A4RG
LIME1
INSR
EIF2B4
COG3
ZFPL1
TMEM262
CDCA5
ANP32C
SATB1
LEFTY2
FAAP24
CEP89
ZNF140
SYMPK
FOXA3
WFIKKN2
TPST1
IFIT1
GUCY1A1
CBWD1
TP63
HDAC7
CCDC77
WBP1L
TUBG1
SH3RF2
RETREG3
DOK3
DDX41
COPS7A
RARB
MRI1
MNX1
MALL
LUC7L2
FMC1-LUC7L2
FMC1
ELOVL1
CDC20
C19orf53
WDR74
TMEM70
STX5
SNAP25
ELOC
AMPD3
ZNF451
WAPL
GALK2
FCGR3A
CP
COPS2
TYK2
PSMD4
KDSR
TMEM109
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
POLD1
NR1H2
MPND
EPYC
C12orf4
TNK2
SERPINB5
RPS7
RPL35A
PRPF18
IQCG
GSK3A
ERF
TUT1
SPTLC3
MTA2
KIF16B
ZNF609
TTI2
MED27
LPIN1
KIAA0895L
INTS9
HMBOX1
GPR84
EXOC3L1
EPRS1
ELMO3
E2F4
CCNL1
ZNF211
RPL32
CYCS
ZNF384
TFPT
RAP2A
PRPF31
CRB1
C16orf72
TINF2
NEDD8-MDP1
NEDD8
KIF22
GMPR2
DYNC1I2
COPZ1
CCR2
ARNTL
ZMYND8
SLC39A1
SCAMP4
RCAN1
RAD51AP2
NOC4L
DDX51
CRTC2
CREB3L4
ADAT3
PPP6R1
TBL1XR1
RAB40B
OCSTAMP
MYCBP2
LTA4H
DMAC1
ZNF547
ZCCHC4
TRAPPC2B
RBM28
MTRF1
MFAP3L
ATP5MC2
TSC1
TDRKH
SCAF1
RRAS
GFI1B
ACTA1
ZNF225
VARS2
TXK
SSBP3
RABL2A
GTF2H4
DHX16
ZSWIM3
TMTC3
SEC11C
NPIPB5
KLHL20
CLEC7A
CEP290
ACOT8
STK25
PLCD3
DPEP3
DPEP2
COX7C
ACBD4
ZC3H12A
UNC93B1
STOML2
SPHK2
RPL18
RANBP2
PIGO
FAM83E
FAM214B
ALDH3B1
NDUFB5
MRPL47
HAX1
ERVMER34-1
TBX19
P2RY10
OXCT2
GUF1
GORAB
CYP2R1
CRYAA
CRYAA2
TULP2
SMARCAL1
NUCB1
ZNF165
UBQLN4
TLDC2
STAM
OR1F12
LAMTOR2
CAND1
WFIKKN1
VMO1
TBP
SH3GL1
PSMB6
PSMB1
NDUFAF5
METTL26
GLTPD2
ESF1
CHAF1A
ZBTB45
WDR46
TRIM7
SLC27A5
RGL2
PSAP
PFDN6
KIF2C
HMX2
EMX1
ECT2
BUB3
ZCCHC8
VARS1
UBE2I
TOMM40
TFB2M
TCERG1
RGS3
KCNN3
H4C5
H2BC7
H2AC7
DDI2
CNST
CCT8
ZSWIM1
ZNF668
ZNF646
SPATA25
MEIS1
JRK
HSBP1
CHD6
ZMAT2
VRK1
SMG8
RPS6KB2
PTPRCAP
METTL3
KMT2B
HARS2
HARS1
FCF1
ESYT1
CLPTM1L
AREL1
TOR1AIP2
TOR1AIP1
STBD1
PPP1R37
OAZ3
NUP205
MRPL9
KBTBD6
GPR89A
GOLPH3L
FAM207A
DENND3
ADRM1
TIMM21
SHPK
PPP1R12C
PNPLA6
PLEKHM3
OR4N2
NSMCE3
ITGB1BP1
IFT27
FBXO15
EMC4
CTNS
CPSF3
ZBTB5
TMEM218
SLC35E2B
LCOR
GTF3C3
F11R
CDC23
C2orf66
ARL1
TTC21A
TNFRSF17
PSENEN
OR8D2
NPIPB2
GSTO2
GPR174
GORASP1
GABPB2
FAM83B
BCL2L1
AP3S2
ANAPC5
ZNF628
TRDMT1
TNFRSF12A
THOC6
SMARCA4
PHB2
NAT14
MYNN
HEMK1
HCFC1R1
GSR
CRYBA4
CLDN6
C3orf18
ACTRT3
ZMYND10
ZFYVE19
VWA5A
STK17B
SOD1
MRPL28
DNAJC17
C12orf43
ZSCAN22
ZNF605
SACM1L
KRT39
KRT19
KRT15
ARID3B
TBL3
SLC26A8
RPS2
RNF151
OLFML2A
NR6A1
NOXO1
MAPK14
ARL4C
TM4SF18
NCBP2AS2
NCBP2
MITD1
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
MRPL53
MOGS
LYZL2
JMJD4
HUNK
FMO1
CCDC12
AP1G1
ANKRD63
ABT1
ZNF696
RPL36
RNF43
MICOS13
LOC102723996
ICOSLG
HSD11B1L
ZNF286A
WIPF1
UFD1
PHC3
NFIB
MRPS15
KIFBP
DMAP1
CDC45
AHCYL2
ZMPSTE24
WNK4
VPS25
UBR2
TTC39C
TMCO2
THADA
RPL37
NUCKS1
MAPKAPK2
KDELR1
ISOC2
GRIN2D
FRYL
FMN1
CTU1
CDK5RAP2
CCDC61
CARD6
BTN3A2
TAS2R38
SNCA
RPL27A
POLR2J3
POLDIP3
NR1D1
FBXO8
FAM184A
CEP44
BAZ2A
ATP5F1B
TAF3
RHBDF2
PCDH1
NDUFAF1
GTF2H2C
GTF2H2C_2
DNAJC14
DCP1A
ATP5MG
ZNF585B
ZNF383
ZNF337
SYNE4
PSMD11
NFKBIL1
LOC101927572
HMOX1
EIF4A3
DLGAP2
DDX39B
CCNC
ATP6V1G2
ALKBH6
UTS2R
PGP
OPA3
NOXA1
MORC3
MLST8
HARBI1
GGCT
E4F1
DAPK3
BRICD5
ATG13
ZSCAN32
ZNF174
SEL1L
RNF103
LY9
EIF4A2
RPL26
RAC3
PDE12
LRRC45
KRBA2
CENPX
CCDC174
UBAC1
TPD52L2
TP53TG5
TOMM6
TEX9
SYS1
PRICKLE4
KAT7
INTS4
IDH2
FRS3
DHX15
AP2M1
ABHD16B
TDP2
TATDN3
RPS27
RPL15
RER1
RAB13
PTPRH
PEX3
NSL1
NKIRAS1
MORN1
GOSR2
FLT3LG
FARSB
EGFLAM
ADAT2
ACOT13
TRAPPC6A
TLR4
SRI
FDXR
DBP
CA11
BLOC1S3
ABI1
ZC3HC1
UFSP2
UCHL5
TXNDC2
TRNAU1AP
TMEM94
TIPRL
SLC7A6
RO60
KLHDC10
KDM4D
KAT6A
CWC15
C4orf47
RPL14
PTDSS2
PSMD5
PLEKHA8
MLLT1
KNL1
KCNH1
DUSP6