ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2140208 | MM.1S
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◣ SRX2140208: MM.1S

◢ SRX6054277: SK-UT-1

◢ HDAC4: STRING

KIF5C
MTRNR2L8
MTRNR2L2
MSH3
DHFR
RGPD2
RGPD1
TXNDC5
FRMPD4
HDAC9
TIPARP
ARHGEF9
MTRNR2L9
ZBTB38
UTP3
ANKRD28
PTPN6
PCM1
EMILIN2
MTRNR2L10
SLC25A20
PPP5D1
CALM3
FNDC3A
C5orf38
SSBP1
DUX4
ARID5B
TOP2A
PLA2G4A
RPAIN
NUP88
ZAR1
MTRNR2L1
IARS2
BPNT1
EPS15
UBE2J1
INO80C
HEATR5B
GPATCH11
SRCIN1
SYT7
GLIPR1L1
CAPS2
PTEN
KLLN
CCL3
UVRAG
PLA2G15
INTS10
HNRNPUL1
ARHGAP17
MYOM2
GTF2I
FCRL5
CSDE1
SF3A3
ANGPTL2
USP22
SPATC1L
PHF19
TOMM40L
ASAH2
APOA2
ARHGEF2
MATR3
BRWD1
TRAPPC9
KLHL29
DENND1B
B4GALT3
RAD52
STAT1
PPP1R2
CCDC90B
TJP3
PROSER3
LIN37
HSPB6
SIX1
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
MAMDC2
MDM2
FBH1
ENPP4
CLIC5
ACTL6A
KLF2
LY6L
PDE4DIP
GCLC
CCDC110
FAM177B
LNPEP
ATP2C1
KLF6
TXNDC11
TMEM256
PLSCR3
NLGN2
KATNB1
ATP6V1G1
FUT10
CYTH3
SCT
DRD4
CDHR5
NLRP3
RAP2B
PRDM15
CCL5
PSPN
ALKBH7
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
TRIP4
PCLAF
GTPBP6
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MRPS18C
HELQ
HCAR3
RAB11B
GUCY2D
DPP9
CCDC39
DAGLB
CBWD2
GBA
TOM1
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
XAB2
UBE2H
STXBP2
RASAL2
PCP2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
C1orf198
H3C4
IFNGR2
H4C4
H2BC6
ZPBP2
USP3
RGS8
IKZF3
SKA2
PRR11
DRAP1
C11orf68
CSNK1G3
WHAMM
FSD2
CHST12
BBX
AURKAIP1
KMT2C
HOOK1
MED23
ENPP3
COMMD2
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
NDUFS7
EML2
MRPS23
LRRC14B
FMO4
AQR
PAX5
MNT
FGG
NUDT13
USP30
POLG
FRG2
EAPP
C2orf42
HSD11B1
ZNF639
SLC2A4RG
LIME1
INSR
COG3
ANP32C
TEPSIN
NDUFAF8
SATB1
LEFTY2
FAAP24
CEP89
WFIKKN2
TPST1
IFIT1
GUCY1A1
CBWD1
SMARCD2
TP63
HDAC7
CCDC77
WBP1L
TUBG1
SH3RF2
RETREG3
POLR3F
DZANK1
SELENOH
MNX1
LUC7L2
FMC1-LUC7L2
FMC1
ELOVL1
CDC20
AMPD3
ZNF451
WAPL
GALK2
FCGR3A
COPS2
TYK2
PSMD4
KDSR
LSG1
TMEM109
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
POLD1
NR1H2
MPND
EPYC
C12orf4
NLK
TNK2
SERPINB5
RPL35A
PRPF18
IQCG
TUT1
SPTLC3
MTA2
KIF16B
CD79A
ARHGEF1
DHX8
ZNF609
LPIN1
GPR84
EPRS1
H4C3
H1-6
H4C15
H4C14
H3C15
H3C14
RAP2A
CRB1
C16orf72
KIF22
COPZ1
CCR2
ARNTL
CIC
ZMYND8
SCAMP4
RAD51AP2
ADAT3
TACO1
PPP6R1
RAB40B
OCSTAMP
MYCBP2
LTA4H
RBM28
MFAP3L
ATP5MC2
TSC1
TDRKH
GFI1B
ACTA1
TXK
DHX16
NPIPB5
KLHL20
CLEC7A
PLCD3
DPEP3
DPEP2
ACBD4
RBBP5
PWWP2A
UNC93B1
STOML2
PIGO
FAM214B
ALDH3B1
HAX1
ERVMER34-1
KHSRP
TBX19
P2RY10
OXCT2
GORAB
CYP2R1
CRYAA
CRYAA2
NDUFS3
KBTBD4
FAM180B
RFX1
TLDC2
WFIKKN1
SH3GL1
METTL26
CHAF1A
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
PRRG2
NOSIP
TRIM7
PSAP
EMX1
ECT2
YJU2
UBE2I
TOMM40
TFB2M
RGS3
KCNN3
DDI2
CNST
CCT8
RHOT2
RHBDL1
ZSWIM1
ZNF668
ZNF646
SPATA25
JRK
HSBP1
CHD6
TMEM107
ZC3H10
RPL41
ESYT1
CLPTM1L
COMMD1
CCT4
STBD1
PPP1R37
GPR89A
GOLPH3L
FAM207A
DENND3
ADRM1
INTS1
NSMCE3
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
LCOR
F11R
CDC23
ARL1
NUF2
TTC21A
TNFRSF17
OR8D2
NPIPB2
GPR174
GORASP1
GABPB2
FAM83B
AP3S2
SSR3
SMARCA4
MYNN
GSR
CRYBA4
ACTRT3
STK17B
SOD1
SACM1L
ARID3B
SLC26A8
MAPK14
H4C12
H4C11
H2BC15
H2AC15
PRR14
FBRS
NCBP2AS2
NCBP2
EVI5L
PARP16
BAHCC1
RPL27
IFI35
WDR36
SNAP47
OSBPL2
NBEAL2
NAA35
LYZL2
JMJD4
HUNK
FMO1
CCDC12
AP1G1
ANKRD63
ZNF696
RNF43
LOC102723996
ICOSLG
PAFAH2
WIPF1
PHC3
MRPS15
KIFBP
DMAP1
LTN1
ZMPSTE24
TTC39C
TMCO2
THADA
NUCKS1
MAPKAPK2
KDELR1
ISOC2
GRIN2D
FRYL
FMN1
CCDC61
BTN3A2
TAS2R38
SNCA
RPL27A
POLR2J3
NR1D1
FBXO8
FAM184A
CEP44
UBE2T
PPP1R12B
TAF3
RHBDF2
PCDH1
NDUFAF1
GTF2H2C
GTF2H2C_2
DNAJC14
DCP1A
TP53I3
SF3B6
FAM228B
SYNE4
LOC101927572
DLGAP2
CCNC
ALKBH6
UTS2R
PGP
OPA3
NOXA1
MORC3
MLST8
HARBI1
GGCT
E4F1
DAPK3
BRICD5
ATG13
SHC1
FLAD1
CKS1B
RNF103
LY9
EIF4A2
SIRT4
RPL26
RAC3
PDE12
LRRC45
KRBA2
CENPX
AK2
USHBP1
BABAM1
TPD52L2
TP53TG5
TOMM6
TEX9
SYS1
PRICKLE4
KAT7
INTS4
IDH2
FRS3
DHX15
AP2M1
ABHD16B
TAF12
TDP2
RPS27
RPL15
RER1
RAB13
NKIRAS1
MORN1
FLT3LG
EGFLAM
ACOT13
TRAPPC6A
TLR4
SRI
FDXR
BLOC1S3
ABI1
ZC3HC1
UCHL5
TRNAU1AP
TIPRL
SLC7A6
RO60
KLHDC10
KDM4D
KAT6A
CWC15
SMAD3
PSMD5
PLEKHA8
MLLT1
KNL1
KCNH1
DUSP6
CCL4L2
CCL4
RBSN
RABEP1
TYMP
TSACC
ODF3B
MGAT3
KLHDC7B
FBXO38
CCT3
CCRL2
MRPL24
HDGF
TRIP10
GPR108
SLC35B1
TIFA
SORBS2
RALGPS2
RAB11A
NUDT4B
CNIH3
CDKAL1
SPRY1
GOT1
SLC25A25
NAIF1
ZNF830
VPS72
TRAF3IP3
PIP5K1A
NOL6
MKNK2
MIS18A
IRAG1
HMGN4
CCT6B
AHCY
SP2
ZNF687
HEXIM2
VPS26C
SLC39A3
RPS23
ATP6AP1L
ALG10B
AGBL3
SPATS2
OLIG1
NMNAT1
LZIC
GRK6
ATP5MC1
SMG6
SFTPA1
NAV1
MAP3K21
ZSWIM4
SAMD4B
MAP3K13
LOC645177
GMFG
FBXO11
C12orf77
TSSC4
PXMP4
CNOT1
ADK
DNM2
ZNF48
TBC1D10B
MYLPF
KRR1
UBE2G1
MDN1
HHLA2
CASP8AP2
SSBP2
ZC3H6
SYNGR4
RUNX2
EPS8
OSBP
TNIP2
P4HB
NFATC2IP
MRPS17
DOLPP1
CCDC9
CBWD6
ATF7IP
LARS1
YPEL5
STK17A
POLR3E
NSUN4
MAP1LC3B2
LAMC1
IGSF8
GPR25
DPT
CCNI
XRCC4
TMEM167A
SYNGAP1
SETD1A
RFX5
PHF1
ORAI3
H4C9
H2BC12
H2BC11
H2AC12
H2AC11
CUTA
CCAR2
C8orf58
ZNFX1
XYLT1
TBC1D19
PRDM10
WDR24
TMEM259
STUB1
PDF
NOTCH1
NIP7
JMJD8
GPR160
ETV5
COG8
CNN2
CFAP100
BSPRY
BARHL1
TMPRSS9
THOC5
NRTN
NCKAP1L
CD69
PSMD3
CEACAM21
RIC1
REEP6
PRPF8
PCSK4
KRT83
FBXO40
CDK5RAP3
RUVBL1
DOCK8
CYP19A1
ANKRD39
RGS9
NDUFS6
MRPL36
XRCC5
TADA1
USP21
UFC1
MED18
LAX1
ACTR2
LRRC8A
KYAT1
HDGFL2
AP3B1
TRAPPC2
STPG3
OFD1
OAT
NELFB
MRPL27
HUS1
FAM166A
FAM117A
EME1
CLN6
BUB1
ZNHIT2
TM7SF2
NR4A1
FAU
ATG5
TSKS
TRUB2
SLC34A3
RUBCN
RNF224
RNF208
CYSRT1
COQ4
AP2A1
H2AC19
H2AC18
SPON2
SP1
COPS7A
PARP8
MRM3
GLOD4
E2F3
GSPT1
SUZ12
RGS1
MYEOV
FAM160A2
CNGA4
ZMIZ1
SLC13A1
ZNF669
MRPL1
ERCC1
DUSP1
ZNF384
KDM4B
STX16
ENSA
MTOR
LRRC37A
CTNNB1
PDGFB
ZBTB45
SLC27A5
ZBTB11
RPL24
ERCC2
FRG2C
ADAMTSL1
CABCOCO1
COL23A1
TNFRSF19
FAP
NAV3
EMCN
DDX23
DPH6
CLPB
BOD1
SLC8A1
TMEM242
VPS50
HEPACAM2
UNK
H3-3B
H2BC14
H2AC14
TMEM115
NPRL2
CYB561D2
CALCOCO1
DDX49
COPE
CHMP4B
CCDC200
TCEA2
FEM1A
NAA80
IFRD2
HYAL3
PHRF1
TBL1X
RWDD1
EHF
PHF12
H2BC4
H2AC6
FBXL19
TSN
LOC102724770
DGCR6
ARHGAP35
AP2S1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
IRF2BP2
MAPKAPK5
OR4M1
GALM
PHB
IL32
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
FAM168A
BANP
PEX14
DFFA
PRCC
TESK2
MMACHC
CCDC163
RPS20
PPRC1
ARID2
ID3
S1PR4
NUDCD1
NCLN
CALR3
C19orf44
SUCLG1
NEBL
ST3GAL2
HIKESHI
ZFYVE1
ART1
TOM1L2
DRC3
PAK1IP1
C6orf52
TSC2
NTHL1
ADAMTS9
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
GSDMB
TMEM208
LRRC29
RAB5B
PMEL
PANK4
OR4Q3
HES5
CDK2
BMF
SPSB3
MRPS34
LRCH4
FBXO24
EME2
INVS
ERP44
NPIPA1
ZNF17
SMPD3
COX16
CCDC146
UCKL1
RAG2
PRR5L
IFTAP
COMMD9
VIPAS39
AHSA1
NDC80
METTL4
HNRNPC
ZNF417
SNX16
RPS3
PEMT
PIGL
NCOR1
SPAAR
HRCT1
PES1
ID1
SP5
ING4
UNKL
C16orf91
PNKD
GPBAR1
AAMP
STIP1
NUP107
BUB1B
PIN4
GATB
OST4
KHK
EMILIN1
GPR137
ZNF268
NOP16
HIGD2A
ZNF608
BMP5
WT1
SRSF11
RXFP4
LRRC40
KHDC4
CNIH4
ZNF513
SNX17
EIF2B4
ZFPL1
TMEM262
CDCA5
ZNF140
SYMPK
FOXA3
DOK3
DDX41
RARB
MRI1
MALL
C19orf53
WDR74
TMEM70
STX5
SNAP25
ELOC
CP
RPS7
GSK3A
ERF