ChIP-Atlas: Target genes

Potential target genes for HDAC4

Query protein: HDAC4
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6054277 | SK-UT-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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HDAC4's Target genes

◢ HDAC4: Average

◢ SRX2140208: MM.1S

◣ SRX6054277: SK-UT-1

◢ HDAC4: STRING

MTRNR2L1
MTRNR2L2
MSH3
DHFR
DUX4
FRG2C
KIF5C
ADAMTSL1
CABCOCO1
MTRNR2L8
SPATC1L
COL23A1
TNFRSF19
MAMDC2
SP2
FAP
FRG2
NAV3
EMCN
DDX23
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
DPH6
KATNB1
EVI5L
CLPB
BOD1
SLC8A1
TMEM242
VPS50
HEPACAM2
UNK
H3-3B
H4C12
H4C11
DNM2
H2BC14
H2AC14
TMEM115
NPRL2
CYB561D2
CALCOCO1
H4C3
H1-6
DDX49
COPE
CHMP4B
CCDC200
POLR3F
DZANK1
SP1
TCEA2
FEM1A
NAA80
IFRD2
HYAL3
PHRF1
TBL1X
RWDD1
EHF
PHF12
H2BC4
H2AC6
FBXL19
TSN
LOC102724770
DGCR6
ARHGAP35
AP2S1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
ARID5B
RBBP5
H4C2
H4C1
H3C2
H3C1
H2AC4
H1-1
IRF2BP2
MAPKAPK5
OR4M1
KHSRP
GALM
PHB
CIC
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
IL32
WDPCP
TSNAXIP1
THRAP3
RANBP10
MDH1
MRPL24
HDGF
FAM168A
BANP
PEX14
DFFA
PRCC
TESK2
MMACHC
CCDC163
RPS20
PPRC1
PAFAH2
ARID2
RFX1
ID3
TEPSIN
NDUFAF8
YJU2
S1PR4
NUDCD1
NCLN
CALR3
C19orf44
SUCLG1
NEBL
ST3GAL2
HIKESHI
ZFYVE1
CCDC90B
ART1
TOM1L2
DRC3
PAK1IP1
C6orf52
TSC2
NTHL1
ADAMTS9
EAPP
ANKHD1-EIF4EBP3
ANKHD1
ORMDL3
GSDMB
SLC25A25
NAIF1
TMEM208
LRRC29
RAB5B
PMEL
PANK4
OR4Q3
HES5
CDK2
BMF
SPSB3
MRPS34
LRCH4
FBXO24
EME2
INVS
ERP44
UBE2T
PPP1R12B
GSPT1
NPIPA1
ZNF17
SMPD3
COX16
CCDC146
UCKL1
RAG2
PRR5L
IFTAP
COMMD9
VIPAS39
AHSA1
TAF12
NDC80
METTL4
HNRNPC
ZNF417
SNX16
RPS3
PEMT
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2-SMG1P6
BOLA2B
BOLA2
PIGL
NCOR1
SPAAR
HRCT1
H2BC15
H2AC15
PES1
ID1
SP5
ING4
PRR14
FBRS
UNKL
C16orf91
MTOR
GBA
PNKD
GPBAR1
AAMP
STIP1
NUP107
BUB1B
PIN4
GATB
INTS1
OST4
KHK
EMILIN1
GPR137
ZNF268
NOP16
HIGD2A
ZNF608
BMP5
WT1
SRSF11
RXFP4
LRRC40
KHDC4
CNIH4
ZNF513
SNX17
EIF2B4
TP53I3
SF3B6
FAM228B
ZFPL1
TMEM262
CDCA5
LY6L
TACO1
ZNF140
SYMPK
FOXA3
PARP16
DOK3
DDX41
RARB
MRI1
MALL
C19orf53
LARS1
WDR74
TMEM70
STX5
SNAP25
ELOC
CP
OSBP
SF3A3
RPS7
GSK3A
ERF
TTI2
MED27
KIAA0895L
INTS9
HMBOX1
EXOC3L1
ELMO3
E2F4
CCNL1
ZNF211
RPL32
CYCS
TFPT
PRPF31
TINF2
NEDD8-MDP1
NEDD8
GMPR2
DYNC1I2
SLC39A1
RCAN1
NOC4L
DDX51
CRTC2
CREB3L4
TBL1XR1
DMAC1
TSSC4
ZNF547
ZCCHC4
TRAPPC2B
MTRF1
SCAF1
RRAS
ZNF225
VARS2
SSBP3
RABL2A
GTF2H4
ZSWIM3
TMTC3
SEC11C
CEP290
ACOT8
ZNF687
STK25
COX7C
ZC3H12A
SPHK2
RPL18
RANBP2
FAM83E
NUDT13
NDUFB5
MRPL47
GUF1
TULP2
SMARCAL1
NUCB1
ZNF165
UBQLN4
STAM
OR1F12
LAMTOR2
CAND1
VMO1
TBP
PSMB6
PSMB1
NDUFAF5
GLTPD2
ESF1
WDR46
RGL2
PFDN6
KIF2C
HMX2
BUB3
H3C4
ZCCHC8
VARS1
TCERG1
H4C5
H2BC7
H2AC7
TMEM107
TRIP10
GPR108
MEIS1
ZMAT2
VRK1
SMG8
RPS6KB2
PTPRCAP
METTL3
KMT2B
HARS2
HARS1
FCF1
AREL1
COMMD1
CCT4
TOR1AIP2
TOR1AIP1
OAZ3
NUP205
MRPL9
KBTBD6
TIMM21
SHPK
PPP1R12C
PNPLA6
PLEKHM3
OR4N2
FBXO15
EMC4
CTNS
SLC35E2B
GTF3C3
C2orf66
HDAC9
PROSER3
LIN37
HSPB6
PSENEN
GSTO2
BCL2L1
ANAPC5
ZNF628
TRDMT1
TNFRSF12A
THOC6
PHB2
NAT14
HEMK1
HCFC1R1
CLDN6
C3orf18
RHOT2
RHBDL1
SIRT4
ZMYND10
ZFYVE19
VWA5A
MRPL28
DNAJC17
C12orf43
ZSCAN22
ZNF605
KRT39
KRT19
KRT15
TBL3
RPS2
RNF151
OLFML2A
NR6A1
NOXO1
ARL4C
NUF2
TM4SF18
MITD1
NDUFS3
KBTBD4
FAM180B
AK2
MRPL53
MOGS
ABT1
RPL36
MICOS13
HSD11B1L
SSBP2
ZNF286A
UFD1
NFIB
CDC45
AHCYL2
WNK4
VPS25
UBR2
RPL37
CTU1
CDK5RAP2
CARD6
POLDIP3
BAZ2A
ATP5F1B
ATP5MG
ZNF585B
ZNF383
ZNF337
PSMD11
NFKBIL1
HMOX1
EIF4A3
DDX39B
ATP6V1G2
PSPN
ALKBH7
ZSCAN32
ZNF174
SEL1L
HEXIM2
CCDC174
ATP6V1G1
UBAC1
TATDN3
PTPRH
PEX3
NSL1
GOSR2
FARSB
ADAT2
DBP
CA11
CD79A
ARHGEF1
UFSP2
TXNDC2
TMEM94
C4orf47
RPL14
PTDSS2
ANO9
AURKAIP1
LSG1
UTP11
FHL3
C1orf159
ZC3H10
RPL41
RAB5C
FAM187A
EFTUD2
CRADD
CD2BP2
CCDC103
BAHCC1
ZNF500
SUFU
NMT1
FASTKD1
DCAKD
ACTR1A
ZNF776
TIMMDC1
G3BP1
SEC13
DCAF7
TLE3
ZNF444
SIRT2
NFKBIB
CLN3
APOBR
SSR3
NLK
STT3A
SART3
KCTD5
ISCU
DSTYK
DLGAP1
PRRG2
NOSIP
STX16
VCPIP1
C8orf44-SGK3
BCL3
SELENOH
SLX4IP
MKKS
SMARCD2
PDE6D
NME1-NME2
NME1
HEXB
COPS7B
SMAD3
ZNF124
TRMT10C
TRAPPC6B
TRAPPC3
TMEM60
THAP11
PNN
PHTF2
MAP7D1
KRT23
EXD2
COX7A2L
USHBP1
BABAM1
ZNF48
TBC1D10B
MYLPF
TSNAX
MT2A
RPL18A
HEXA
ZNF143
SAMD1
RGS14
MISP3
LMAN2
FBXW11
C19orf67
CCAR2
C8orf58
LMNB2
SHC1
FLAD1
CKS1B
TRAF7
SUPT7L
SLC4A1AP
RAB26
API5
TPGS1
EXOC4
EMP3
VEZT
SNX15
MTMR9
FGD6
COPS7A
SUPV3L1
SUGP1
SNX1
RPIA
MAU2
H4C8
CIAO2A
LTN1
ZNF235
CTDP1
ZNF26
MRPL21
MRPL20
IGHMBP2
CCNL2
ZNF420
KRR1
ZNF384
THAP1
RBM25
SSBP1
PWWP2A
TMX2
TARBP1
TAOK3
SUDS3
RNF121
RBM42
MED19
LOC100133315
EIF3F
SCYL3
ZNF688
CDCA8
C1orf109
SLC35B1
ZNF226
SRD5A1
SCRIB
RPL27
IFI35
EIF2AK3
TPRKB
ZBTB45
SLC27A5
MARS1
ARHGAP9
TMEM63C
DHX8
PABPN1
GET3
DYNC2I2
USP48
TXNL4B
DHX38
PRR22
DUS3L
CCDC59
ZKSCAN8
ING3
RPL21
NTMT1
C9orf50
RGPD2
RGPD1
TXNDC5
FRMPD4
TIPARP
ARHGEF9
MTRNR2L9
ZBTB38
UTP3
ANKRD28
PTPN6
PCM1
EMILIN2
MTRNR2L10
SLC25A20
PPP5D1
CALM3
FNDC3A
C5orf38
TOP2A
PLA2G4A
RPAIN
NUP88
ZAR1
IARS2
BPNT1
EPS15
UBE2J1
INO80C
HEATR5B
GPATCH11
SRCIN1
SYT7
GLIPR1L1
CAPS2
PTEN
KLLN
CCL3
UVRAG
PLA2G15
INTS10
HNRNPUL1
ARHGAP17
MYOM2
GTF2I
FCRL5
CSDE1
ANGPTL2
USP22
PHF19
TOMM40L
ASAH2
APOA2
ARHGEF2
MATR3
BRWD1
TRAPPC9
KLHL29
DENND1B
B4GALT3
RAD52
STAT1
PPP1R2
TJP3
SIX1
TBC1D17
PNKP
ATF4
AKT1S1
RMDN2
CCDC138
CCL3L3
CCL3L1
MDM2
FBH1
ENPP4
CLIC5
ACTL6A
KLF2
PDE4DIP
GCLC
CCDC110
FAM177B
LNPEP
ATP2C1
KLF6
TXNDC11
TMEM256
PLSCR3
NLGN2
FUT10
CYTH3
SCT
DRD4
CDHR5
NLRP3
RAP2B
PRDM15
CCL5
TRIP4
PCLAF
GTPBP6
SMCO1
CXCR5
CBWD5
CBWD3
AIM2
MRPS18C
HELQ
HCAR3
RAB11B
GUCY2D
DPP9
CCDC39
DAGLB
CBWD2
TOM1
MDM4
IL17A
NPR1
ILF2
GLDN
CCM2
XAB2
UBE2H
STXBP2
RASAL2
PCP2
NCOA7
KANSL3
FER1L5
BDH1
TJP1
RUFY3
CRYBB1
C1orf198
IFNGR2
H4C4
H2BC6
ZPBP2
USP3
RGS8
IKZF3
SKA2
PRR11
DRAP1
C11orf68
CSNK1G3
WHAMM
FSD2
CHST12
BBX
KMT2C
HOOK1
MED23
ENPP3
COMMD2
NGB
NAT16
FETUB
SLC33A1
CMSS1
BIN2
NDUFS7
EML2
MRPS23
LRRC14B
FMO4
AQR
PAX5
MNT
FGG
USP30
POLG
C2orf42
HSD11B1
ZNF639
SLC2A4RG
LIME1
INSR
COG3
ANP32C
SATB1
LEFTY2
FAAP24
CEP89
WFIKKN2
TPST1
IFIT1
GUCY1A1
CBWD1
TP63
HDAC7
CCDC77
WBP1L
TUBG1
SH3RF2
RETREG3
MNX1
LUC7L2
FMC1-LUC7L2
FMC1
ELOVL1
CDC20
AMPD3
ZNF451
WAPL
GALK2
FCGR3A
COPS2
TYK2
PSMD4
KDSR
TMEM109
TLR5
TIMM22
STAP2
SMARCE1
RAD51AP1
PRPF19
POLD1
NR1H2
MPND
EPYC
C12orf4
TNK2
SERPINB5
RPL35A
PRPF18
IQCG
TUT1
SPTLC3
MTA2
KIF16B
ZNF609
LPIN1
GPR84
EPRS1
RAP2A
CRB1
C16orf72
KIF22
COPZ1
CCR2
ARNTL
ZMYND8
SCAMP4
RAD51AP2
ADAT3
PPP6R1
RAB40B
OCSTAMP
MYCBP2
LTA4H
RBM28
MFAP3L
ATP5MC2
TSC1
TDRKH
GFI1B
ACTA1
TXK
DHX16
NPIPB5
KLHL20
CLEC7A
PLCD3
DPEP3
DPEP2
ACBD4
UNC93B1
STOML2
PIGO
FAM214B
ALDH3B1
HAX1
ERVMER34-1
TBX19
P2RY10
OXCT2
GORAB
CYP2R1
CRYAA
CRYAA2
TLDC2
WFIKKN1
SH3GL1
METTL26
CHAF1A
TRIM7
PSAP
EMX1
ECT2
UBE2I
TOMM40
TFB2M
RGS3
KCNN3
DDI2
CNST
CCT8
ZSWIM1
ZNF668
ZNF646
SPATA25
JRK
HSBP1
CHD6
ESYT1
CLPTM1L
STBD1
PPP1R37
GPR89A
GOLPH3L
FAM207A
DENND3
ADRM1
NSMCE3
ITGB1BP1
IFT27
CPSF3
ZBTB5
TMEM218
LCOR
F11R
CDC23
ARL1
TTC21A
TNFRSF17
OR8D2
NPIPB2
GPR174
GORASP1
GABPB2
FAM83B
AP3S2
SMARCA4
MYNN
GSR
CRYBA4