ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

H3C15
H3C14
H2AC19
H2AC18
COX20
VPS28
VEZF1
H2AZ1
DNAJB14
B3GALT4
VPS52
RPS18
RRP36
MEA1
ZC3H10
RPL41
IDI1
SYNRG
GH1
FAM174C
RABL6
COL23A1
NECAB3
SGSM3
POLR2J3
SCRIB
H4C15
H4C14
FRG2C
VPS9D1
EDC4
KMT2A
ZNF34
RPL8
POLG2
ZNF581
ZNF580
DONSON
SEC31A
PHF23
DVL2
TLCD1
NEK8
FRG2
INPP5E
STUB1
JMJD8
ID2
EPN1
SNAP47
H3-3A
DPH7
MAZ
UBE2M
CHMP2A
RNASEK
C17orf49
CUL7
TARS3
SNAPC5
ENAH
OTUD7B
PCDH9
PIP4K2B
PRRT2
PAGR1
HYI
NUMBL
ACP4
CCDC200
TMEM132A
MMP24OS
MMP24-AS1-EDEM2
GPAA1
EXOSC4
DNAJC9
ZNF862
NANOS1
ADNP
NRAS
RIT1
AKAP8
ZNF513
GGA2
H2BC5
H1-4
ADARB1
DYRK1B
ANKRD54
TMEM230
AMDHD2
ABTB1
GTF2IRD2B
ZNF653
CABYR
BCAP29
ORAI3
HNRNPU
SUMF2
RPL17-C18orf32
RPL17
C18orf32
MEMO1
GCN1
NAXE
PCNX2
MTHFS
H2BC21
H2AC21
H2AC20
MTRF1L
MAN2C1
HIPK1
RAB4A
CTNNAL1
ARHGAP4
CHAF1B
SECISBP2
DLG4
ACADVL
FNBP1
NUDT4B
CHD2
TAF10
RCOR3
ID3
SDCCAG8
CEP170
PYGO2
LOC101928120
RRM2
MPDU1
LOC100996842
CD68
ST3GAL3
CXorf38
SH3BGRL3
COMMD3-BMI1
COMMD3
BMI1
SLC25A10
ZNF865
CCDC138
PRR7
STIMATE-MUSTN1
STIMATE
H3C13
H2BC18
TOM1
FOXP1
AKAP5
MAML1
POGZ
WDR48
SCN11A
DENND4B
LMBR1
FBXL3
ATP5F1E
PPP3CB
KLF9
ECI1
RPEL1
PRRC2A
AIF1
MORC3
SYCE2
DHRS11
FAM199X
TRIM8
AKT3
VANGL2
KIF27
MORF4L1
SMIM19
SLC20A2
NCOA7
RUFY2
TYMP
SCO2
SEC61A2
PABPN1
SRSF11
MRPL40
HIRA
PPFIA4
KLF12
GPR180
ZNF398
GPS2
KRBA2
C7orf26
LAMTOR3
AGK
ZFAND6
MAPK8IP3
C6orf226
EXOSC6
DPY19L4
ADCK2
RABGGTA
SIMC1
NCAM2
CACFD1
FAM76A
SPATA1
GNG5
PCBP4
LATS1
C17orf75
PEX7
STC2
RNF139
PANK3
HOXA4
OAZ1
ATXN7L2
LRRC37A3
HMGN2
RBM26
FAM219B
ZNF326
IL10RB
SLC25A42
KDM3B
AGO3
PHIP
EDEM1
RABGAP1
PHF1
FLOT2
KAT6A
ACBD6
TBK1
TIMM13
SMYD2
ZFP37
NBPF1
UGT1A3
FSTL3
KANSL1
ARHGAP35
STRIP1
SCAI
LSS
EPB41
PRRC2B
GPX1
B3GALNT2
OPN3
CHML
FAM131A
H4C2
H3C2
H2AC4
TM2D3
REV3L
SLC25A22
SLC44A5
H2BC11
H2AC11
DERA
ATXN7
CELF1
UBXN2A
DESI2
ZNF197
TADA1
POMT1
CLK3
EGLN1
NME3
MRPS34
EME2
CIRBP
USP21
POMZP3
PDCD2
CNIH4
H1-2
NDUFB2
SOD2
ZNF445
GATA2
ACBD3
BOLA3
TEX38
ATPAF1
KANSL3
FER1L5
HFM1
ADIPOR1
H4C5
CCDC106
SLAIN1
TMEM223
TMEM179B
ADAM17
ATAT1
DAPK3
POLR2C
PACS1
SKIDA1
MSI2
NOXA1
STMP1
CD320
ARHGEF11
CCZ1B
BACH1
PPP4R2
EPM2A
TRIM65
AKT2
PLPP5
NEIL1
HDAC10
YBEY
MCM3AP
KMT5B
ZNF148
KIAA1522
NDST2
UCKL1
NUB1
ABL2
BRAF
PXK
TRIM3
SCAMP3
RHOU
EFCAB2
FUT11
TP53BP2
WIZ
FARP2
TMEM35B
C8orf76
DDX59
PHACTR2
PEX6
C1orf21
WDR37
LRRC24
C8orf82
SEC22C
NKTR
NOTCH2NLC
IKZF4
OCRL
FOSL2
UNC119
DENND2B
MLLT6
TTC21A
GORASP1
KCNJ4
ACADM
SSRP1
P2RX3
TOMM20L
NFAT5
TBC1D5
TBC1D10B
MYLPF
TPTEP2-CSNK1E
E2F3
ARFGAP2
PRKAG1
C5orf24
WDR27
C6orf120
RBM5
SRSF4
PYCR2
GDI1
PRKAG2
GGPS1
ARID4B
LRRC61
ACTR3C
DISC1
ARL5A
TSPAN10
NPLOC4
GOLGA1
RNF220
CLN5
LRRFIP2
TMEM184B
RAD23A
BAG2
VARS1
CISD3
LIN9
CAMTA1
PIN4
FAM20B
SATB1
TPGS2
TIRAP
PATJ
E4F1
MAN1A2
FBF1
MARCHF7
COX5A
DNAH14
WDTC1
TRAPPC8
MIER1
LIX1L
MOV10
FAM118A
TRMU
PARP1
B4GALT7
KMT2C
CZIB
THAP9
TPK1
AP1S2
ZNF621
KCTD3
ICA1L
H4C3
H1-6
GTPBP6
IMPDH2
JAK1
ZNF786
RAP2C
CMTM6
C19orf53
LMO7
MYBL2
ZNF341
GTPBP3
ANO8
MAP3K2
TRAF4
MKRN1
COPS7B
NADSYN1
DHCR7
PDE6D
TICRR
KHDRBS1
GPR137
ZNF35
SMARCD2
BTBD1
MPC2
DCAF6
EXOG
MPP5
REEP2
ZNF76
URB2
TAF5L
GET4
SRCAP
LOC730183
TMUB1
FASTK
GAB2
AGAP3
SIRT7
RAD54L2
CDC42BPA
SP1
NF2
EYA4
ARID3B
ZNF771
PHC2
THRB
NCR3LG1
ATRIP
SP3
VPS36
CKAP2
HEBP2
SNX5
MGME1
ZNHIT2
TBXAS1
HIPK2
TM7SF2
PRKRIP1
TXLNA
PURA
NUDT16L1
GATAD2B
ROM1
EML3
YWHAZ
LRRC37B
ACAT2
PAM16
PITPNM2
BCKDK
PSMA4
DOCK7
CAPZA2
HNRNPF
POM121C
CCSER2
TNFRSF6B
MRPL28
CAPN7
CCSAP
HGSNAT
SLC37A3
FOCAD
PPP1CC
RABIF
CCDC130
SCARF1
RILP
EZH2
SQSTM1
MGAT4B
MAT2B
DNAJC11
SETD6
TAOK2
UBA2
CUL1
ERLIN1
PIP5KL1
TLL2
BRWD1
MTARC1
DSG2
CD276
SETMAR
AMMECR1L
GANAB
NCKIPSD
PUM2
CSTB
NAT10
GPC4
GTF2I
TBC1D4
LLGL2
SPECC1L
CSKMT
C11orf98
PCBD2
ZBTB37
TIGD3
KANSL1L
ZNF77
SAMD1
THAP3
DBN1
STK40
URGCP
URGCP-MRPS24
CHUK
OVCA2
XYLB
LRRC73
ZNF706
RPS11
KIAA2026
IQGAP1
TTC13
TFAP4
GMPPB
AMIGO3
FBXW2
NID1
KIF23
MRPL38
HOXA3
IBA57
RC3H2
ARHGEF12
NUDT3
PDE4DIP
MSX2
ATXN10
CD2AP
EIF3CL
EIF3C
MAD1L1
AMDHD1
UNC119B
MSRB2
PHGDH
CACNA2D3
CCDC38
NOXO1
GFER
GPN2
NUDT4
STX6
DHX9
SUMO2
MAPK8IP2
TSEN15
STAU1
LPGAT1
CCDC107
PTCH1
PBRM1
GNL3
ELOA
RPL6
RIPK1
PTPN11
GALNT2
NUAK1
FAM149B1
ECD
PDE8A
PWP2
LOC102724159
AQP11
USP6NL
USF2
VWA7
SCFD1
PAFAH1B1
UBA3
ARL6IP5
IAH1
PHF19
FBXO10
NMD3
RUVBL1
EEFSEC
MFSD14A
YBX1
ACTR8
UTP4
DERPC
CHTF8
SEMA4B
STX7
RALGDS
THSD1
TMPPE
GLB1
SETD5
CELSR3
SPSB3
MIB1
HDLBP
KLHL25
NOMO3
SEPTIN2
NOMO1
FYN
DENND11
GCLC
YWHAB
SSX2IP
TRIM52
CIZ1
VPS26A
ACTN2
GINM1
DNM1
ATXN2
MARCHF6
JPT2
MYCBP2
CTF1
BCL7C
ZNF644
SNX7
RTN4
PCSK6
ATXN7L3
TAOK1
KCTD18
OSBPL1A
FPGS
ANKRD36B
ZNF282
SBNO1
ZNF860
OSBPL10
H2BC7
H3C4
H2AC7
FAM207A
NCOA2
UNC5A
TAB2
MBOAT2
RFX1
WDR73
NMB
LMNB1
POGLUT3
NANS
IMPACT
CAPRIN2
DCUN1D4
ZNF629
IL13RA1
SH3D19
TPM4
DCT
C20orf144
ACTL10
NFKBIA
LONP1
CYREN
CATSPERD
SLC44A3
ZDHHC21
C1orf198
TTLL4
GAGE2C
GAGE2B
GAGE2A
COG2
CEP350
ZMYM4
DGKH
PRC1
DTNBP1
DEK
UBE2R2
CTNNB1
ROGDI
CUL9
ZFYVE9
SMARCB1
MGRN1
PRKD3
RANBP17
TLE4
UBE2J1
FGF18
RNF180
FAM135A
FDX2
NXF1
FAM53C
CDC25C
NFIB
PRKACB
AKAP13
MAP2
RAP1A
NPRL3
RPP21
RNF135
SRF
MYL6
FANK1
SELENOH
VARS2
N4BP3
H4C4
H2BC6
RALB
STUM
MOCS2
DIS3L
LRCH2
RECQL4
LRRC14
B3GAT3
SH3GLB1
ARSB
MNX1
RNASE10
TMEM121B
DDX17
RNF187
NUCKS1
STON2
POLR2D
GTDC1
RHOBTB1
RNF217
ZBTB2
RP9
TLK1
NLRX1
DRAP1
C11orf68
NPM3
FGF8
CSRNP2
DEGS1
HNRNPA2B1
CBX3
NADK
VDAC3
RASL10B
TNFRSF13C
MLXIP
SLC22A23
TLCD3A
ZMYND11
TUBB2A
STOML1
PML
HNRNPAB
TRIB3
SP2
HIVEP1
PNPLA7
MRPL41
MAPKAP1
EIF2D
TTC5
HSPG2
RNF38
THAP12
GVQW3
ATP1B1
MRPS24
SRPRB
MTMR3
PHLDB2
CCDC78
TIGD1
EIF4E2
FAM228B
SF3B6
HAGHL
NOM1
THBS3
MTX1
GALNT11
SLC12A5
NGLY1
WIPI1
ZER1
ZNF384
TDRD7
PDXDC1
BMP2K
SGPL1
HNRNPA3
RALA
TMEM120A
CEMP1
RPAP3
FEZ2
SMARCC2
PIAS1
ZFR
PDCD4
RTN1
MAPKAPK2
PKNOX1
CNOT11
SBF2
STYX
TMEM129
TACC3
KIFBP
KCTD1
BMP8B
MRTFA
FAM122C
FAM122B
UPF3A
NEK7
B4GALT6
SPTSSA
HUS1
C14orf28
NKIRAS1
CDH24
SLC12A6
NR1D2
BPTF
ZBTB44
LTC4S
STX17
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
DIPK1A
SPATA9
RHOBTB3
HP1BP3
BAZ1B
HPCA
ADAP2
FOXJ3
NEXN
HLCS
NPTN
SFT2D3
ZBTB12
EHMT2
C2
DLK2
KIF7
SNAPC4
ADSS2
ZNF740
CSAD
SRA1
SRSF10
PHC1
JUP
VANGL1
NCKAP1
UBE2A
KAT2B
NPHP3
ZEB2
VTI1B
CHD1L
CALM1
ZNF652
TATDN2
SORT1
TOR1B
SOCS1
GSN
RAB14
ZNF24
METRN
SPATC1L
HMGN1
ING5
SPIN1
SPOUT1
CORO1B
PITRM1
PRRG4
C9orf40
SMARCA1
FZD2
MED14
PRKAA2
UBTD2
CEP120
TET2
SCAPER
PTBP1
HOMER2
DEDD
KAT8
PRPF40B
ODF3L2
SLC26A6
IGF1R
PGBD5
SLC2A11
DUSP14
TOP2B
ZNF584
ZBTB24
PRSS23
PRPSAP2
VRK2
NRIP1
EIF4ENIF1
PNMA1
ZBTB20
MIF4GD
GPAT4
CCDC71
CFL2
MIA3
SEC16A
C9orf163
ACOX3
COX19
DPY19L3
PSMD3
SREBF2
ELAPOR2
C1orf115
EOMES
DSE
SH3GL3
RCCD1
MTG1
GDPGP1
CIB1
C18orf21
CLSPN
SPAG9
SCOC
ARL8B
CCDC77
SDC4
KDM5A
AKTIP