ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089509 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◢ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◣ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

BCAS3
PSMD6
HEATR6
TUBD1
RPS6KB1
TEX14
RAD51C
IQGAP3
TRIM37
PFDN4
DYNLRB2
BRIP1
UNG
NPAS4
APPBP2
USP32
PARD6B
HIPK1
YPEL2
BCAS4
SGO1
PPM1D
ZNF217
SLC12A9
XRCC2
RNFT1
ARFGEF2
KLHDC4
C3orf14
NCOA3
CREBRF
ZFPL1
CDCA5
BIRC5
FANCI
RNF166
CTU2
MOK
METTL1
EEF1AKMT3
SKA3
MRPL57
FANCD2
PPM1E
POLQ
CYB561D1
DHX37
PHTF1
TRIP13
BRD9
TICRR
BARHL1
SCRT1
TROAP
UTP20
GABARAPL2
NCAPH
SKA2
PRR11
KAT2B
SLC45A3
FBXO5
TTF2
RRP15
CRBN
RAD54B
SMG8
RAB22A
DZIP3
CIP2A
WASHC5
NSMCE2
DCLRE1B
AP4B1
DLGAP5
CSTF1
AURKA
DHX40
NUF2
ATXN7
SUMF1
ZHX3
CPEB4
CCNA2
FAM72C
DCAF4
SRGAP2C
FAM72B
C12orf66
CKAP2L
C16orf46
SIKE1
SMC2
HSDL1
DNAAF1
ZNF331
CCT2
SAP30BP
RECQL5
UBE2C
SRGAP2B
FAM72D
FAM214A
ZEB1
HTR5A
DYRK1B
INTS1
SRGAP2
FAM72A
OAZ3
MRPL9
DOP1A
FBXO32
MOCS3
DPM1
SHCBP1
MYL12B
RRP1
ROPN1L
VAPB
HCFC2
GLT8D2
NET1
TTLL11
FAM207A
BICDL1
KLHL24
RUVBL1
DDX11
SPAG1
HSF1
BOP1
EIF3C
EIF3CL
TRMT61A
MTMR14
GTF2H3
EIF2B1
HELZ
KIF14
LOC101928764
DNAH7
SPPL2A
CEP128
TWNK
MRPL43
NEIL3
ZFYVE1
ING4
NBPF1
TMOD3
RACGAP1
GNAI3
BMP7
NEMP1
CALCOCO1
ABCA5
ESPL1
NRAS
NEURL2
CTSA
EXO1
CS
TRIM33
LYSMD2
KPNA2
ATG101
MIS18A
TBX2
IQSEC3
RAD51
NHP2
SLC27A2
RNF114
MCM7
AP4M1
GPR89B
SEC22A
QSOX2
MCM10
WASHC2A
NDUFV1
AP4E1
PRKAB1
ATP1A1
METTL2A
MRPS23
POLR2J3
ZSCAN2
KLHL36
PRKAR1A
TBC1D30
GNS
PRMT6
CENPN
APH1A
LIX1L
KIFC1
CLPTM1L
VRK1
RRP12
MYL12A
SLC25A24
VARS1
CCDC86
RHNO1
FOXM1
GNA13
BUB1B
RAE1
RRM2
PLK4
THOC7
XKR7
L1CAM
NAA25
FAM227B
DTWD1
AZIN1
NUB1
C20orf27
RNF40
CCDC189
PRPF18
TCTN2
TSEN2
TADA3
ARPC4-TTLL3
ARPC4
MED20
BYSL
GPR89A
CFAP69
ERN1
MKI67
CCNB1
IPO4
ATG14
RHEBL1
SH3BGR
LCA5L
AP3B2
PRELID3B
TTC27
NME1-NME2
NME1
RPS6KB2
TPTE
C8orf33
NTAQ1
MAX
CENPBD1
RAD18
C16orf71
ANKS3
DDX49
COPE
TBC1D13
FBXO43
ATP6V1C1
TXLNG
CALCOCO2
GRWD1
WIPI1
INCENP
ATXN1L
NXF1
CHFR
GPSM2
NOMO3
NOMO1
SNAPC4
MTFR2
TP53INP1
PPP2R3B
TRPM7
GTSE1
MYG1
FAM210B
PLK1
GTPBP10
TOLLIP
MAPK8IP2
MYBL2
C11orf24
MBTPS1
CCT5
ATPSCKMT
SLC52A2
FBXL6
SCFD2
LTV1
TMOD2
TAF4B
DENND2C
SLC25A25
NAIF1
CPLX2
PPP1R16A
DIMT1
CFDP1
CDT1
BLM
GFPT1
MED13
SMYD5
ZNF778
ALAD
TEX2
NDUFAF6
CCNE2
ZFAND2A
KLF10
MXD4
XPOT
SKA1
NCKAP5L
MLYCD
METTL17
AURKB
NUDT2
KIF24
DUT
PCNX3
LATS2
WDR4
SLC25A19
DHODH
BUB1
CSDE1
TTK
NUDT1
MRM2
DERL1
TUFT1
KIF18B
NOL6
TMEM208
LRRC29
PLEKHM3
CYB561
ZC3H18
NOTCH2NLC
SGO2
IPO11
HAUS7
PDXDC1
ASB8
TRIM45
SRPRB
POLR2J
ZMAT3
RABL2B
RTF2
GFOD2
PUF60
VANGL1
PREX1
UTP23
TSEN54
CASKIN2
C6orf89
LARP4
PSMD12
SLC35A5
ATG3
WDR74
MON2
GALK1
CDC14B
CLTC
PSRC1
ACOX3
RSPH1
LTO1
GABPB1
SPTAN1
RTKN2
RMDN1
ATP5F1E
CPNE3
HEATR5A
ZNF821
TOP1
DBF4B
ARSG
IQCG
LMLN
SLC16A6
PDP1
PGBD5
TCF19
CCHCR1
LSG1
LRPPRC
FIS1
OSGIN2
SLC27A3
NCAPG
ZBTB9
TRMT44
HSPA5
NAGPA
LZTFL1
TSFM
PSMA5
PIAS3
QTRT1
NIPSNAP3A
P2RY2
TSR3
GNPTG
RIPK2
SFSWAP
FRAT1
NOTCH2NLA
ESCO2
TFPT
PRPF31
NOTCH2
BCAS2
KMT5A
SUV39H1
DSCC1
STOML1
DEPDC1B
GOLGA3
CALR
GFI1B
TSC1
DKC1
SMAGP
MARCHF8
PRCP
DDIAS
SART1
DCAF7
USP54
AACS
COTL1
NUP107
DUS2
DDX28
PTPN1
RNF121
LOC100133315
FLCN
NEK2
GTF3C4
DDX31
MIGA2
LRP10
CACNG4
CIT
CBLB
CCNG2
REXO4
MFN1
DYNC2I1
CCDC146
SPEF2
CSRNP2
ANKRD28
RABL2A
FDX2
ANAPC7
PDSS1
TMEM120B
NBPF15
AP2A1
LLGL2
UFD1
CDC45
METTL3
COX14
EDC3
USP14
TBC1D31
MYO5C
PTTG1IP
GCDH
RAB5B
GRB2
NR4A2
SLC25A44
MFSD14B
CLCN7
HARBI1
ATG13
PRR29
MYO5A
DDX19A
GLE1
PYCR3
STRIP1
HAUS5
CEP55
EIF2D
DIAPH3
SPATA33
PLCG1
CHIC2
ATR
EEF1E1
TRIAP1
MACROD1
NOP9
DHRS1
CKAP5
ETFDH
C4orf46
SLC35A2
DMXL2
FITM2
ATAD2
SLF2
UTP4
DERPC
CHTF8
PIGU
EXOSC5
BCKDHA
SNRPE
PPP1R12B
PRPF19
MRPL2
KLC4
NEK11
ASTE1
SWI5
GOLGA2
PRMT3
CCND3
SPG7
POC5
NKIRAS1
PCYT1A
COPS3
RFWD3
FAM117B
NR1D2
ZNF622
GLG1
MRPL28
SYNJ2BP-COX16
SYNJ2BP
CREB3L2
CDK5RAP2
ZNF148
SPATA17
GPATCH2
KLC1
SPC25
NOC4L
DDX51
TMEM71
PHF20L1
SERINC3
SARS1
KLHL20
MAPK8IP3
WDR59
DYNLL2
ARMC2
C12orf45
TACO1
TMEM129
TACC3
LACTB
TRIM25
CHRNA5
WDR3
GDAP2
ANKRD42
RFC1
C8orf76
CALM1
GATAD2B
WDR46
PFDN6
SRD5A1
BBS1
UBE3B
CNTRL
HPS3
DOLPP1
C5
VPS4A
NUMB
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
MAD2L1
FBXW8
RXYLT1
TMEM203
NDOR1
FANK1
POLL
DPCD
PTGFRN
KLHL18
KIF9
TOP1MT
TTLL5
ERG28
ARFGAP1
KCTD13
NMD3
NTNG1
MRPL27
EME1
AP1M1
RUBCN
EIF3B
SQLE
SAXO2
EFL1
NOB1
PIP4K2C
WWP1
DICER1
RBM19
MND1
SSNA1
ANAPC2
PDCD2L
NGLY1
SAC3D1
SF3B4
LRRC37A3
NEK10
ARNT
SUSD6
CORO1C
URB1
INKA2
DDX20
PCOTH
MIPEP
IFT88
RPGR
KATNIP
GTF3C1
SPEF1
MFSD5
SETDB1
NOP16
HIGD2A
PPAN-P2RY11
PPAN
ZGRF1
LARP7
VPS45
RTTN
MRPS14
ZKSCAN8
CARD19
INIP
CLBA1
TRAP1
BCKDHB
ERGIC1
BANP
WASHC2C
AEN
ATP6V0D1
WDR61
DDX46
TMEM67
SND1
SLC35C2
THOC3
TDRKH
SSBP2
CHCHD6
E2F4
NAP1L1
FAM117A
GSTP1
VAC14
LSS
RECQL
GOLT1B
NME2
CDC25B
SPOP
GTPBP4
NDUFS3
KBTBD4
SLC25A46
ACBD7
KYAT1
TMEM38B
TAF6L
PHF1
LRRC8A
FBXW9
MRPS21
TMEM258
FEN1
BLOC1S2
LSM14B
TOX4
RAB2B
USP8
ABHD4
CDC25C
NAA35
PDE4DIP
CCDC88A
TMEM65
FAM53C
HEATR5B
GPATCH11
CENPA
MCRS1
PPM1G
IFT22
SEL1L
ANKRD46
RPLP0
WDR37
IQGAP1
GMFB
TADA2B
CCDC96
WDR62
THAP8
SPATA2
CCDC150
MARS1
ARHGAP9
PDIA4
TSC2
NTHL1
PRKCA
ARHGAP33
PPIL1
PITPNB
AHCYL1
UPF2
MRPL3
DEPDC1
GSN
RAB14
ERAL1
ANGEL1
USP36
ANKS1A
APPL2
CENPW
PBK
CKS2
COQ2
GOLGB1
C12orf73
C14orf28
SLC37A4
UCP2
TVP23C
DNA2
VPS33A
SETD4
TAMM41
INTS2
LRFN4
RINT1
MRPS22
SLC25A14
OVOL1
CDK1
LRGUK
EEF1AKNMT
FBXO33
HNRNPF
RAD54L
FAAP24
CEP89
PPP2R5B
POLG2
EIF2B2
KAT7
CEP112
BACE1
PC
ZNF17
EIF3E
ZC3H3
SPOUT1
IFT57
MLEC
ZGPAT
ARFRP1
SNX27
ACSF3
PPRC1
TONSL
NOMO2
C12orf43
METTL18
C1orf112
TCOF1
WDR70
SVOP
DPH7
RCCD1
TPD52L2
H3-3B
GSTO2
STYX
PLBD2
SIRT7
SLC29A3
PCYT2
SLC46A1
ATXN2
GSKIP
ATG2B
ADPRS
RNASEH1
ANAPC5
TBK1
WDR20
HSP90AA1
PRRC1
XPNPEP1
RASA2
SORT1
SH3BP5
POLD1
SLC29A2
SF3B2
TCP11L2
ENTPD5
BBOF1
CNBP
C12orf29
CARMIL3
UTP25
POLR1B
COMMD4
SPCS1
GLT8D1
PSMD9
HPD
ADPGK
ZNHIT1
PLOD3
CDK9
AMIGO1
ZFR
NOL8
CENPP
BBS5
SPC24
CDIPT
TMEM231
RRP1B
HSF2BP
ATG7
TXNL4A
ZNF212
RBFA
MKRN2
ABCC10
PEBP1
URI1
RFX5
COX19
ZDHHC17
TRADD
FBXL8
ZMYM5
SLC25A26
NEU1
RIDA
POP1
TMEM267
C12orf65
HRH3
ITGB4
AP1S1
KCTD3
RBM28
COG7
SPTLC1
NUP35
TNFAIP1
IFT20
GLS
FBXW5
C8G
SHC1
CKS1B
ASPM
UGGT1
CRELD1
SSR3
PWP2
LOC102724159
MMS22L
PIP4P2
SURF2
SURF1
FSD1L
ARF3
TMED9
TENT5C
SULF2
FUBP3
CIBAR1
RPS21
LTN1
PRMT2
MYBL1
PSMB7
RPF2
ARRDC4
CHRNB2
ZNF706
FAM76A
BCAS1
CTDSP2
NUDT16L1
CA2
OAT
CREBBP
SFXN1
CDC25A
STX16
NGDN
CDK5RAP3
C11orf49
VPS13B
ABCF2
TMEM183A
TRMT12
TXNDC16
GPR137C
EXD2
GNB5
SUPV3L1
FRAT2
POLD3
PDCD11
ATP5MD
CCDC77
GDPGP1
CIB1
KDM5A
MRPL45
BAG6
XPR1
ZNF142
BCS1L
EXOC6
RPS6KA4
ZDHHC23
RAD51AP1
C12orf4
SEC22B
TEDC1
HASPIN
PHF5A
ACO2
THAP10
LRRC49
CAMKK2
SPATA7
NBPF11
INPP5K
GET3
TMED10
MIA3
EDC4
GNPNAT1
EMC8
COX4I1
TMEM167B
ZMYND19
GID4
ATPAF2
SPTSSA
CLPX
DNAJA3
NOL11
E2F8
INTS8
FANCA
RNF216
GYG1
RGL2
KCND3
NUP210
ZNF530
NARS2
MNS1