ChIP-Atlas: Target genes

Potential target genes for HDAC1

Query protein: HDAC1
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5089504 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC1's Target genes

◢ HDAC1: Average

◢ SRX5930122: Acute myeloid leukemia

◢ SRX5930123: Acute myeloid leukemia

◢ SRX017703: CD4+ T cells

◢ SRX687554: Erythroid progenitors

◢ SRX116421: K-562

◢ SRX116422: K-562

◢ SRX186644: K-562

◢ SRX7135364: K-562

◢ SRX7135367: K-562

◢ SRX1514285: Kasumi-1

◢ SRX5089495: MCF-7

◢ SRX5089496: MCF-7

◢ SRX5089497: MCF-7

◢ SRX5089498: MCF-7

◢ SRX5089499: MCF-7

◢ SRX5089500: MCF-7

◢ SRX5089501: MCF-7

◢ SRX5089502: MCF-7

◢ SRX5089503: MCF-7

◣ SRX5089504: MCF-7

◢ SRX5089505: MCF-7

◢ SRX5089506: MCF-7

◢ SRX5089507: MCF-7

◢ SRX5089508: MCF-7

◢ SRX5089509: MCF-7

◢ SRX5089510: MCF-7

◢ SRX5089511: MCF-7

◢ SRX5089512: MCF-7

◢ SRX265234: ME-1

◢ SRX2140207: MM.1S

◢ SRX235031: NALM-6

◢ SRX5162252: Placenta

◢ SRX5162253: Placenta

◢ SRX5162254: Placenta

◢ SRX4313223: RH-4

◢ SRX059709: VCaP

◢ SRX059710: VCaP

◢ HDAC1: STRING

PSMD6
HEATR6
BCAS3
BRIP1
NPAS4
PARD6B
TRIM37
TUBD1
RPS6KB1
ARFGEF2
APPBP2
DYNLRB2
UNG
PFDN4
NCOA3
FBXO32
SMG8
IQGAP3
SLC12A9
USP32
HTR5A
SCRT1
ZNF217
NAGPA
BCAS4
FBXO5
ZNF331
TRIP13
BRD9
IPO4
ZFYVE1
LOC101928764
PPM1D
TEX14
RAD51C
MTFR2
C3orf14
CCT2
DCLRE1B
AP4B1
C12orf66
ATG14
MCM7
AP4M1
KLHDC4
TROAP
HSF1
BOP1
XKR7
FANCI
RAD54B
SKA3
MRPL57
CRBN
BIRC5
CREBRF
DZIP3
CIP2A
SFSWAP
KPNA2
UTP20
PPP1R16A
ZFPL1
CDCA5
TTF2
TTK
SRGAP2C
FAM72B
TSR3
GNPTG
TRMT61A
OAZ3
MRPL9
SGO1
TACO1
LTV1
NTAQ1
BARHL1
FANCD2
HCFC2
GLT8D2
MOK
UBE2C
RBM48
PEX1
POLR2J3
DLGAP5
IQSEC3
GTF2H3
EIF2B1
DHX40
TRIM33
FAM214A
MCM10
EIF2D
SIKE1
TMEM208
LRRC29
TMOD3
POLQ
VPS50
HEPACAM2
C8orf33
ATXN7
THOC7
CCDC86
MAPK8IP2
WASHC5
NSMCE2
TICRR
TTLL11
RRM2
HIPK1
MIS18A
RNF166
CTU2
NUDT1
MRM2
NAA25
XRCC2
RFC3
RAD18
NCAPH
RACGAP1
DHX37
URB1
PGBD5
ZNF530
PTRHD1
CENPO
BLM
TMEM150A
MYL12B
TSEN2
DNAH7
FAM72C
RAE1
SUMF1
RNF40
CCDC189
MOCS3
DPM1
CEP128
RSPH1
METTL3
RBM19
KIF14
SAP30BP
RECQL5
VRK1
CCT5
ATPSCKMT
TBX2
C16orf46
ZC3H18
ENTPD5
BBOF1
METTL2B
CPLX2
ATP6V1C1
RRP12
TMEM186
PMM2
FAM227B
DTWD1
RMDN1
CPNE3
PIP4P2
METTL1
EEF1AKMT3
EXO1
YPEL2
PHTF1
TONSL
SMYD5
MED20
BYSL
POLR2J
ANGEL1
SRGAP2B
FAM72D
ZAR1L
BRCA2
BUB1
PDXDC1
NGDN
ZEB1
RAB22A
VARS1
NEIL3
MND1
NHP2
RTKN2
MTMR14
GFPT1
TRPM7
RBM28
METTL2A
SLC45A3
KLHL36
TPTE
TRMT61B
LYSMD2
TMOD2
DCAF4
PPAN-P2RY11
PPAN
SRPRB
CYB561D1
RABIF
NME1-NME2
NME1
TTLL5
ERG28
CENPA
RNFT1
BMP7
EIF3C
EIF3CL
ZNF696
BICDL1
CDT1
TBC1D13
CYC1
POC5
CDK1
AEN
LIX1L
TCTN2
CCNB1
SPPL2A
SRD5A1
MED13
MLYCD
NEURL2
CTSA
RECQL4
LRRC14
SRGAP2
FAM72A
MRPS23
TBRG4
ATAD2
TOP1MT
CDK4
PPM1E
NBPF11
AZIN1
RIPK2
AXDND1
NOTCH2
NGRN
BZW2
ANKMY2
SURF2
SURF1
VGLL4
TMEM251
MOAP1
PTPN1
GNPNAT1
SLC25A13
CAPZA2
RRP15
LRPPRC
SARS1
GTPBP10
CHID1
C16orf71
ANKS3
ZNF778
NOTCH2NLC
METTL6
EAF1
OSTM1
CUL2
CCNA2
MTRNR2L8
NOM1
VPS13B
LMTK2
RFC2
NAA20
L1CAM
UTP23
INKA2
DDX20
SLC25A24
NET1
IFT88
NOMO3
NOMO2
SLC35B1
GABPB1
MON2
CKAP2L
KIF18B
NEK2
CNPY3
STX7
CAMSAP2
MCRS1
CCDC146
NOP16
HIGD2A
WDR43
BUB1B
SAXO2
EFL1
COPS3
WDR35
FBXO33
EAPP
GINS2
NOL8
CENPP
ZNF212
SMC2
ACOX3
PLK1
SEC13
NDUFAF6
MKI67
KCNH6
TMEM183A
C6orf89
ZNF79
SLX1B
SLX1A
BOLA2B
BOLA2
TBK1
MET
TTC27
WDR4
DDX42
CCDC47
DUS4L-BCAP29
DUS4L
COG5
ZNF367
VANGL1
MYL12A
SPG7
ATL2
ABTB1
TSFM
CCNE2
FANCM
INTS1
ATP1A1
MBTPS1
KIFC1
NDUFV1
RXYLT1
AP4E1
E2F4
MTX1
XPO4
THBS3
TEX2
TSR2
TADA2B
CCDC96
POLR1B
DYRK1B
EEF1E1
RNASEH1
SPTLC1
PES1
NOL6
AURKB
IDH3A
UFD1
CDC45
SKA2
PRR11
HSDL1
DNAAF1
ATG101
TBC1D30
AOPEP
CFAP69
HELLS
NOL10
PIGH
RNF114
FRAT1
CPSF1
VAPB
AGFG2
CFDP1
NDUFAB1
FBXO43
PIAS3
CALM1
ZFP41
NEMP1
ZNF688
DDX49
COPE
KNOP1
LSG1
RRP1B
HSF2BP
PDIA4
MTPN
LUZP6
C14orf28
INTS2
KLF10
CSRNP2
ESCO2
GPATCH4
SLC52A2
FBXL6
AP3B2
EBAG9
RBM8A
UMPS
GPSM2
SPNS1
RPP40
MFSD1
RPS23
ATP6AP1L
RUVBL1
SEL1L
DYNC1I2
TRMT44
LSM8
CPLX1
TRMT1
NRAS
RPS29
TMEM18
LRR1
HAUS5
CSTF1
AURKA
NBPF1
FAM207A
RHBDD2
GLRX5
PSMD12
RAD51
SND1
SPATA33
RFC1
C11orf24
MFSD5
GET3
CENPBD1
WASHC2A
GTSE1
SH3BGR
LCA5L
THAP5
DNAJB9
CKAP5
YIPF4
TECPR1
KIF6
SPAG9
CENPW
GOLGA3
OXR1
EIF3B
MYO5C
ZBTB9
ADCK1
TMEM231
HEATR5A
ZC3H3
SCRIB
GDPGP1
CIB1
HAGH
FAHD1
TEDC2
POLR2J2
FRAT2
PSMG4
SGO2
LSM5
DUS2
DDX28
TAMM41
NAGK
L2HGDH
DMAC2L
DLD
SPEF2
GSN
MDM1
CSDE1
NUP160
CMBL
SF3B4
POLG2
SLC25A36
SLC27A2
TRAPPC10
VPS4A
BDH1
FBXW8
LMAN2
THUMPD3
TRIAP1
APH1A
PPP1R12B
TOX4
RAB2B
SUV39H1
COX6C
SH3BP5
ZC3H13
PLK4
FDX2
RAD9A
TSEN54
CASKIN2
GPR89A
ATP5F1E
TMEM203
NDOR1
COQ2
RPL32
DOLPP1
EMC8
COX4I1
PSMD5
FBXW9
DDX11
SLC25A19
ZC3HC1
MRPS35
DNAJA3
TDRKH
NEK11
ASTE1
LINS1
ASB7
H1-10
GCDH
LTN1
C12orf45
DPY19L4
USP14
ERAL1
TOR1B
CAPN7
C7orf50
SLC35A1
VKORC1L1
STK3
CCNG2
CDC14B
DDX46
GPR89B
POLR2K
WDR81
FANK1
MECR
FAM13B
FBXL13
ARMC10
ATP5MG
SF3B2
PRKAR1B
LEO1
CYP51A1
ZNRD2
SPRYD7
COG7
CYB561
NME2
LRFN4
MEA1
KLHDC3
RBM42
DSTYK
TRIM4
MAD1L1
GREB1
CEP135
CENPN
TFIP11
INCENP
CLCC1
RHNO1
FOXM1
HSP90AB1
NOTCH2NLB
DENND2C
BAZ1B
STOML1
PIF1
ZNF408
ARHGAP1
CIT
TMEM129
TACC3
POLE3
C9orf43
ANKRD28
HERC4
MAP3K3
MED6
NANS
ATP9A
SPC25
C5orf51
MAX
PRMT6
MED23
PDE4DIP
MAF1
RNF19A
PTGFRN
GPR135
RABL2B
RAB14
PIP4K2C
CBLL1
PHF5A
ACO2
LCMT1
P2RY2
KCND3
CNKSR3
ZNF275
VPS33A
NUP107
ARMC2
SPATA2
REXO4
TEDC1
ATXN1L
ABCA5
MCCC1
MDM2
SNRPC
NR6A1
GRINA
KAT2B
ATR
MYBL1
TIGD5
EEF1D
ARL8B
NBPF12
EEFSEC
TRAPPC9
UBE3C
ALDH1A3
GABARAPL2
KRR1
SLC35A2
TAF1C
OTULIN
SNRNP25
POLR3K
CLPTM1
STRN3
AP4S1
PDSS1
ZFAND2A
NUFIP1
GPALPP1
FPGS
ZHX1-C8orf76
ZHX1
ATG7
ADPGK
DUSP12
PKMYT1
HPCA
TEX10
GNA13
DENND4B
C17orf97
SRRT
SHCBP1
TRIP4
ZSWIM9
LIG1
TAF3
TP53INP1
CLPTM1L
UBR5
KIF20A
BRD8
ANAPC7
DBF4B
PNPLA8
GFOD2
NOTCH2NLA
LIN54
CLBA1
AP1G1
RHPN1
ALDOA
QTRT1
BOLA2-SMG1P6
LSS
MXD1
STYXL1
RFWD3
EXOC2
NIFK
SENP5
PDP1
FUBP3
TBL2
CACNG4
SOS1
SUPV3L1
DOP1A
MRPL3
PSMB7
NUB1
POLD3
PRKAR1A
XPR1
C12orf65
RABL2A
ASPM
PNPT1
CHUK
LTO1
UBL7
PEX3
ADAT2
TKFC
DDB1
SUB1
POM121
RHEB
GLRX3
KIAA0319
USP6NL
EML4
TRIM39
QSOX2
TOMM40
WDR61
SPAG1
SLC25A44
GALK1
WDR20
HSP90AA1
STX6
BCAS1
E2F7
PLCL1
AKAP9
SMAGP
PCLO
DYNC2I1
UBXN11
WDR3
GDAP2
PSME3
CDK5RAP3
EEF2K
FAHD2A
PNN
GCH1
PDIA6
ALDH5A1
MAD2L1
IPO11
VTA1
NMBR
DDX19A
SKIV2L
NELFE
TMEM67
CGGBP1
RUBCN
TNFAIP1
IFT20
GCN1
PIP4P1
ZNF654
WDR73
GSTO2
PCMTD2
MAN1A2
VAC14
PPIL1
NOL11
ZMAT3
FANCC
RIDA
POP1
PRPF3
WIPI2
GRB2
PAPOLA
WDR74
PNO1
THOC3
RNASEH2A
SEC22B
PUS7
TMEM120B
CHCHD6
TADA3
ARPC4-TTLL3
ARPC4
CLCN7
USP10
PPM1H
HECTD4
LLGL2
MTERF1
ZSCAN9
NELFCD
TMEM260
CDC20
RHEBL1
TAF5
MCM3
NCKAP5L
TOMM70
LNP1
TMEM43
CHCHD4
STRADA
COA8
BAG5
DDX56
FANCA
MRPL58
WDSUB1
NFATC2IP
SF3B3
COG4
SKA1
RPIA
ECT2
PPM1G
TARS3
CDKN3
CLTC
SLC7A6OS
PRMT7
NDUFV3
RPL30
DOHH
TTC21A
GORASP1
CDK7
NUDT15
GNS
ATP6V1H
TBC1D23
SAAL1
PMPCB
TMEM127
CIAO1
SUCLG1
ERLEC1
ASB3
LRRC6
KIDINS220
DHTKD1
SYNCRIP
C11orf80
R3HDM2
MDN1
EIF1AD
BANF1
MXD3
TMEM258
FEN1
BLOC1S2
TATDN1
NDUFB9
C8orf76
CNOT10
PWWP2A
PRRC1
MRPS7
GGA3
ERCC3
GOLGA1
NAMPT
ERGIC1
KCNK12
URM1
LOC389831
LSM14B
HELZ
AP1M1
KCTD13
H3-3B
DHX15
LRCH1
EDC3
WIPI1
FLAD1
LYRM4
FARS2
TASP1
TAF4B
USP54
MRPS21
RRM2B
RCE1
PDPR
PSMD4
PRPF6
RMDN3
UBR7
GON7
TMEM184C
WWP2
ACTR3B
SERPINB6
CENPE
OS9
SERINC3
PEPD
HEATR5B
GPATCH11
LARP4
RPL6
PTPN11
PRELID3B
NOB1
MVK
BMS1
C3orf38
PEBP1
TP53RK
SEC22A
RELB
ARPP19
SOAT1
PSEN1
ATXN3
ACTR2
MAP11
POM121C
DNA2
SETD4
VPS11
XRN2
NDUFS3
KBTBD4
ARSG
GTF3C5
MTHFD1L
TM2D3
SMARCC1
CANX
IFRD1
SLC16A6
VPS33B
SPTAN1
VTI1B
SCAI
LZTFL1
CS
TBC1D31
XPC
LSM3
ZNHIT1
PLOD3
BRK1
TMED10
ELAC2
METTL9
CCND3
PPIG
NCAPH2
LMF2
HES3
PAPOLG
UNC50
COA5
NUF2
DSCC1
ATP6V0D1
TOR1A
NAA35
PARL
ADAR
ZZEF1
CYB5D2
MKS1
ABCB8
UBXN1
TCP11L1
UBE2N
SRPK2
POLR2D